BDGP Sequence Production Resources |
Search the DGRC for LD06929
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 69 |
Well: | 29 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG9948-RA |
Protein status: | LD06929.pep: gold |
Preliminary Size: | 1411 |
Sequenced Size: | 1233 |
Gene | Date | Evidence |
---|---|---|
CG9948 | 2001-01-01 | Release 2 assignment |
CG9948 | 2002-05-30 | Blastp of sequenced clone |
CG9948 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9948 | 2008-04-29 | Release 5.5 accounting |
CG9948 | 2008-08-15 | Release 5.9 accounting |
CG9948 | 2008-12-18 | 5.12 accounting |
1233 bp (1233 high quality bases) assembled on 2002-05-30
GenBank Submission: AY118496
> LD06929.complete CTCAAGCAAGGGATTCTTAATTATCAAGTTCAAGCTAGTTTAATTCAATT TGGTAGCCATGCGCACCAGTTACAAGAAAAACAGACCTTTCGACTTCAAG CTAATTGATCTGGTGGAACCCAATCCTGTGCTCTATAAGAGATCTGGACT CTCGAACTACGATGCCATGAAGGCGAAAACCGATATCTGGGCTCGCATAG CCGAGATGATGGGCTGTGATGTGGACTTCTGCCTGATGCGCTGGAACAAT CTGCACTATCAGTTTCGCAAGGAGTTTCGCCGCGCGGACACCAGTGGATC CACCTGGCCGTACCTGGAACGCCTGCGATTTTTGGCCGAGATCCAGCCGC CCTCCAAAGTGAAAACCAAACCCAAAACAAACAAACAGGAGGCGACCATC CAGACGGAAACTCCTGTGCAATTTTTGTGGGACACTTTTGAGGATGGGGA TGTTCCACAGCAGTCGAGTACGTTCATAATCGAGGAGGTCATCGAGGAGC CCAGTGAACAGATCATCCAAGAGGAAATCATCTACGAGGAACAAGAGCCC GCTGAAATAATCTCGCCCAGAAGCAGCTTTCTCCAGATGGACCAAATACT GGCCCAACTAAAGGAACCGCAGCGGAGAAGGGCAGAACGAAGGATTACAG CATTTCTGCTCAAGTGCCAGCTGCGTGCCTTGAGTAATCAGTCCGTGGAG GACCTTAGCATCTAGTTTCCAGTTCACATACTCTCAAACTTTATTTTTAA AAAACAGAATATAACTAAGATTAAACCTTGCACTTGTCCAATTCCAACCA TGCCACTTTCGGCTTGACAATGAACTGATCGCGCGGCAAACTGTCCAGCA TGCTGGCCTGCTGGCGGACGTACTTCACCAGTCGCTCGATCTGCGCGTAA TCATCACAGTTCATCTCGAAGAAGCGGCGCCACAAGGCGCAGGCCAAAAC CCGATCGTCGGACATGATGCCCTCGTCGTAGGCGATTAGGGCCGCTTGGA ACTGCTCGGATAAGGTCTCGATTTGCTGACGGGTGCGTGAAGGATTGTGA GCCTGTTGGGAAACACATATGAAGAGCATAAAGATTATATATATAAAGGT GAACTAAAGTAAAACCTACTCCCAATTTCTTGGCGCGTGTGTTAACATCT CCCCACATCGCCTCCACAATGCAGTTGCGCAGGAAGCGTCCATCCTCGCC CGTTTCGGTAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 6948468..6948688 | 1..221 | 99 | -> | Plus |
chr3L | 6948745..6949731 | 222..1209 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9948-RA | 1..657 | 59..715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9948-RA | 1..657 | 59..715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9948-RA | 1..657 | 59..715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9948-RA | 1..657 | 59..715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9948-RA | 1..657 | 59..715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9948-RA | 18..1225 | 1..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9948-RA | 27..1234 | 1..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9948-RB | 187..1394 | 1..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9948-RA | 18..1225 | 1..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9948-RB | 187..1394 | 1..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6956177..6956397 | 1..221 | 100 | -> | Plus |
3L | 6956454..6957440 | 222..1209 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6956177..6956397 | 1..221 | 100 | -> | Plus |
3L | 6956454..6957440 | 222..1209 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6956177..6956397 | 1..221 | 100 | -> | Plus |
3L | 6956454..6957440 | 222..1209 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 6949277..6949497 | 1..221 | 100 | -> | Plus |
arm_3L | 6949554..6950540 | 222..1209 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6949277..6949497 | 1..221 | 100 | -> | Plus |
3L | 6949554..6950540 | 222..1209 | 99 | Plus |
Translation from 58 to 714
> LD06929.pep MRTSYKKNRPFDFKLIDLVEPNPVLYKRSGLSNYDAMKAKTDIWARIAEM MGCDVDFCLMRWNNLHYQFRKEFRRADTSGSTWPYLERLRFLAEIQPPSK VKTKPKTNKQEATIQTETPVQFLWDTFEDGDVPQQSSTFIIEEVIEEPSE QIIQEEIIYEEQEPAEIISPRSSFLQMDQILAQLKEPQRRRAERRITAFL LKCQLRALSNQSVEDLSI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23554-PA | 219 | GF23554-PA | 1..219 | 1..218 | 743 | 71.6 | Plus |
Dana\GF10162-PA | 203 | GF10162-PA | 4..203 | 11..218 | 214 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14393-PA | 222 | GG14393-PA | 1..222 | 1..218 | 966 | 93.2 | Plus |
Dere\GG15076-PA | 198 | GG15076-PA | 4..198 | 11..218 | 206 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22582-PA | 257 | GH22582-PA | 1..257 | 1..218 | 577 | 51.1 | Plus |
Dgri\GH15369-PA | 257 | GH15369-PA | 1..257 | 1..218 | 577 | 51.1 | Plus |
Dgri\GH16194-PA | 209 | GH16194-PA | 7..209 | 11..218 | 200 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9948-PC | 218 | CG9948-PC | 1..218 | 1..218 | 1131 | 100 | Plus |
CG9948-PB | 218 | CG9948-PB | 1..218 | 1..218 | 1131 | 100 | Plus |
CG9948-PA | 218 | CG9948-PA | 1..218 | 1..218 | 1131 | 100 | Plus |
CG6683-PA | 197 | CG6683-PA | 4..197 | 11..218 | 205 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12972-PA | 245 | GI12972-PA | 1..245 | 1..218 | 619 | 54.8 | Plus |
Dmoj\GI13343-PA | 213 | GI13343-PA | 7..213 | 11..218 | 218 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15048-PA | 168 | GL15048-PA | 1..59 | 1..59 | 279 | 83.1 | Plus |
Dper\GL15048-PA | 168 | GL15048-PA | 110..168 | 160..218 | 188 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22146-PA | 244 | GA22146-PA | 1..244 | 1..218 | 662 | 56.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14808-PA | 218 | GM14808-PA | 1..218 | 1..218 | 1139 | 97.7 | Plus |
Dsec\GM24933-PA | 199 | GM24933-PA | 4..199 | 11..218 | 206 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13980-PA | 218 | GD13980-PA | 1..218 | 1..218 | 1136 | 97.7 | Plus |
Dsim\GD12981-PA | 199 | GD12981-PA | 4..199 | 11..218 | 221 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13117-PA | 246 | GJ13117-PA | 1..246 | 1..218 | 610 | 54.6 | Plus |
Dvir\GJ13172-PA | 216 | GJ13172-PA | 7..216 | 11..218 | 185 | 26.8 | Plus |
Translation from 58 to 714
> LD06929.hyp MRTSYKKNRPFDFKLIDLVEPNPVLYKRSGLSNYDAMKAKTDIWARIAEM MGCDVDFCLMRWNNLHYQFRKEFRRADTSGSTWPYLERLRFLAEIQPPSK VKTKPKTNKQEATIQTETPVQFLWDTFEDGDVPQQSSTFIIEEVIEEPSE QIIQEEIIYEEQEPAEIISPRSSFLQMDQILAQLKEPQRRRAERRITAFL LKCQLRALSNQSVEDLSI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9948-PC | 218 | CG9948-PC | 1..218 | 1..218 | 1131 | 100 | Plus |
CG9948-PB | 218 | CG9948-PB | 1..218 | 1..218 | 1131 | 100 | Plus |
CG9948-PA | 218 | CG9948-PA | 1..218 | 1..218 | 1131 | 100 | Plus |
CG6683-PA | 197 | CG6683-PA | 4..197 | 11..218 | 205 | 28.8 | Plus |