BDGP Sequence Production Resources |
Search the DGRC for LD07058
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 70 |
Well: | 58 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG12713-RA |
Protein status: | LD07058.pep: gold |
Preliminary Size: | 1460 |
Sequenced Size: | 1373 |
Gene | Date | Evidence |
---|---|---|
CG12713 | 2001-01-01 | Release 2 assignment |
CG12713 | 2001-10-10 | Blastp of sequenced clone |
CG12713 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12713 | 2008-04-29 | Release 5.5 accounting |
CG12713 | 2008-08-15 | Release 5.9 accounting |
CG12713 | 2008-12-18 | 5.12 accounting |
1373 bp (1373 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061083
> LD07058.complete TTAAACAGCTGTTTATTCTGGCGCTCTTTCATACGTTCGCTGAAATAGTT TTGTATTTCTGGCCGGAAATGATGTCCCAAATTCCGGATTTGGCCGGCGG AAATGGGCAACAGAAGCGAAAGATTCTGAGCGGCGGCGAATACAATAAGA TTTGCCGGTTTATCAACGGCTTCCACGGCTTGGCCATCGACTGCGAGTTC GAGTTGAGGAATCGCTTCTTCAGGGACGTGGAGCCAATGGCATTGACATG CATCCTGCAGTCGGAGCTTTTTAACCGGTCGCGTGGTCACTGGAAGCAGG ATCAGCGCGGGAAAAGGCTTCTCAAAGCCTACGAGGAGCAGAAAAACCTA TACTACGACAATGCCCTACTGATCCGAATGGCTTGTGCCGAAGCACTGAA CCCGGTGGCTCTCTGCAGGATGTTGCTGCAGGAGAAGTACAAGGATCGGC ATCGATCGCACATCTCACAGCTTCTTAGGCATCCGCATCTTATCGACGAT CCCAAGCTGGCGGCCAATGTGCAGCAGTGCATAGTCAGCGACAATCAAGA GGGATCCATAACGGACCTGCGACGCCGCATAGTTGGCGAGGAGTACGAGC TTAAGCTTAAGAATCTGGCTAAGGAGGCGGGTATCCATTTCTACGACGAG AAAGATTTGCGACGCATGGGATATGACAAGACGCCGGACATCAAGATGAT CCTGCCATTTCTTTACAAAGGCTCTGTGATCAACTGGATCGAGAGCAAGG CCAATTTTGGGGACACCAAGGGACACAAGTCGAACATCCAACAGCAGCTG CAAAGCTACTGCAATCGTTTTGGTCCTGGAATGATAATCTATTGGTTTGG GTACCACGAGGAAACGCCTGCGCTGCCGGATAACAACATTGGCATTACAG TACTCGCTGATTTTCCGGCAAAAGAAGATTTGGTTTTTATGCAACTCGCG CATGAAGAATACTCCGCTGAGACTCCGACAACGAAAGAGGACAGCAGTTC CGGGAGTCAACCTATTGTAGCTGAATGTCCAACCAAAGAACTGAAAAAAC TTTCATGAAACTGAAAGTGCAGGGAAATCGTTAATGTATACTTTTTAACT ATAGAACGAAATGTGCTTGTTAAAACAATGTACATAGAAAGCCTAAATTT TAAGTGGGATGTTGCCAAATGTTAAGTAGCATTGAAACCATCAAAGACAG GAATGCTTTGCATTTATACACTAACCATAAGATTAGACAATGCTTCTGCA GCAATAACTTTTCTCTTTAGTTTTAACAATTATACTGTTTTTATTGTATT TATAAATTCTCATTTACATGATGTATTCAAAGGTTTTTTAGTAAAAAAAT CGTATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15823236..15823774 | 817..1355 | 2680 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 15822683..15823171 | 329..817 | 2445 | 100 | Plus |
chr3L | 24539361 | chr3L | 15822287..15822614 | 1..328 | 1640 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15833409..15833953 | 817..1361 | 2710 | 99.8 | Plus |
3L | 28110227 | 3L | 15832856..15833344 | 329..817 | 2445 | 100 | Plus |
3L | 28110227 | 3L | 15832460..15832787 | 1..328 | 1640 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15826509..15827053 | 817..1361 | 2710 | 99.8 | Plus |
3L | 28103327 | 3L | 15825956..15826444 | 329..817 | 2445 | 100 | Plus |
3L | 28103327 | 3L | 15825560..15825887 | 1..328 | 1640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15822287..15822614 | 1..328 | 100 | -> | Plus |
chr3L | 15822683..15823171 | 329..817 | 100 | -> | Plus |
chr3L | 15823237..15823774 | 818..1355 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12713-RA | 1..990 | 69..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12713-RA | 1..990 | 69..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12713-RA | 1..990 | 69..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12713-RA | 1..990 | 69..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12713-RA | 1..990 | 69..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12713-RA | 1..1351 | 1..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12713-RA | 1..1351 | 1..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12713-RA | 1..1351 | 5..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12713-RA | 1..1351 | 1..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12713-RA | 1..1351 | 5..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15832460..15832787 | 1..328 | 100 | -> | Plus |
3L | 15832856..15833344 | 329..817 | 100 | -> | Plus |
3L | 15833410..15833947 | 818..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15832460..15832787 | 1..328 | 100 | -> | Plus |
3L | 15832856..15833344 | 329..817 | 100 | -> | Plus |
3L | 15833410..15833947 | 818..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15832460..15832787 | 1..328 | 100 | -> | Plus |
3L | 15832856..15833344 | 329..817 | 100 | -> | Plus |
3L | 15833410..15833947 | 818..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15825560..15825887 | 1..328 | 100 | -> | Plus |
arm_3L | 15825956..15826444 | 329..817 | 100 | -> | Plus |
arm_3L | 15826510..15827047 | 818..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15825560..15825887 | 1..328 | 100 | -> | Plus |
3L | 15825956..15826444 | 329..817 | 100 | -> | Plus |
3L | 15826510..15827047 | 818..1355 | 100 | Plus |
Translation from 2 to 1057
> LD07058.hyp KQLFILALFHTFAEIVLYFWPEMMSQIPDLAGGNGQQKRKILSGGEYNKI CRFINGFHGLAIDCEFELRNRFFRDVEPMALTCILQSELFNRSRGHWKQD QRGKRLLKAYEEQKNLYYDNALLIRMACAEALNPVALCRMLLQEKYKDRH RSHISQLLRHPHLIDDPKLAANVQQCIVSDNQEGSITDLRRRIVGEEYEL KLKNLAKEAGIHFYDEKDLRRMGYDKTPDIKMILPFLYKGSVINWIESKA NFGDTKGHKSNIQQQLQSYCNRFGPGMIIYWFGYHEETPALPDNNIGITV LADFPAKEDLVFMQLAHEEYSAETPTTKEDSSSGSQPIVAECPTKELKKL S*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12713-PA | 329 | CG12713-PA | 1..329 | 23..351 | 1745 | 100 | Plus |
Translation from 68 to 1057
> LD07058.pep MMSQIPDLAGGNGQQKRKILSGGEYNKICRFINGFHGLAIDCEFELRNRF FRDVEPMALTCILQSELFNRSRGHWKQDQRGKRLLKAYEEQKNLYYDNAL LIRMACAEALNPVALCRMLLQEKYKDRHRSHISQLLRHPHLIDDPKLAAN VQQCIVSDNQEGSITDLRRRIVGEEYELKLKNLAKEAGIHFYDEKDLRRM GYDKTPDIKMILPFLYKGSVINWIESKANFGDTKGHKSNIQQQLQSYCNR FGPGMIIYWFGYHEETPALPDNNIGITVLADFPAKEDLVFMQLAHEEYSA ETPTTKEDSSSGSQPIVAECPTKELKKLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24096-PA | 309 | GF24096-PA | 1..302 | 8..310 | 1232 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15932-PA | 332 | GG15932-PA | 1..332 | 2..329 | 1545 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17204-PA | 300 | GH17204-PA | 8..298 | 16..305 | 1165 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12713-PA | 329 | CG12713-PA | 1..329 | 1..329 | 1745 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13967-PA | 294 | GI13967-PA | 8..288 | 16..293 | 1086 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25214-PA | 330 | GL25214-PA | 7..318 | 16..318 | 1252 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23730-PA | 331 | GA23730-PA | 8..319 | 16..318 | 1251 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25561-PA | 326 | GM25561-PA | 1..326 | 1..329 | 1654 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14576-PA | 326 | GD14576-PA | 1..326 | 1..328 | 1655 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14105-PA | 295 | GJ14105-PA | 14..293 | 16..293 | 1134 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20620-PA | 307 | GK20620-PA | 1..304 | 8..314 | 1095 | 65.4 | Plus |