BDGP Sequence Production Resources |
Search the DGRC for LD07342
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 73 |
Well: | 42 |
Vector: | pBS SK- |
Associated Gene/Transcript | mip130-RA |
Protein status: | LD07342.pep: gold |
Sequenced Size: | 3455 |
Gene | Date | Evidence |
---|---|---|
CG3480 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3480 | 2005-01-26 | Blastp of sequenced clone |
mip130 | 2008-04-29 | Release 5.5 accounting |
mip130 | 2008-08-15 | Release 5.9 accounting |
mip130 | 2008-12-18 | 5.12 accounting |
3455 bp (3455 high quality bases) assembled on 2005-01-26
GenBank Submission: BT021408
> LD07342.complete CAAAAGTGTGTGTTCGTACGGGTAAAAAGTGATTTAAATTCAAAATATTC AGCGAAACGACCGCCTCCAATAGAAGCAACTGTACCCTATGCTTACCGGC CGTCCAGTGAGAATGTCCGTTGCAGTAAACCAAAAAGGCTGGGGTAAGAA GGCAGGAGCTTCCGTATCCGACTCCGCAATTCGTACACAGTCCGCCCTCA GCGAGGGGGGTGGGGCCATTGACGTCCGGCCGATGGAGCACGACGAGGAA ATCAATCGCGAAGATCTCAACCTCGACGAGGACGATGAGATGGAGGAGGA GGAGGAGGAGGAGCACGCCGACGAAGAGGACGATGACGAGGAGCCGGATA GCAACGAGAACAGCGCACCGGAGGAGCAAGTAGAGCCGCCGGCCTTCAGC CTAGCGACGCTGGGACTCCAACGCGTGGGCAGCGCACCGCCGCCCAAGCC CAAAGTCCAGAAGGCCCCAATCCCGACCCTAAATGCCCGTGGAATGCCTG CTCGGATACGAAAGAGAAATCGTCTCTTTTATGACGAGAACATCATCAAC GATGACAAGCCGCTGCGCATGAGCTTGGCACCCAAGAAGACGCCTGGCAG ACCACCGCAGTCTGCCGGCGGTGGCTCTAGCCAGAAGATCCCGCTTACCC CGTCTAAGGTGCTGAAGAAGCGCAAGGGAGTGGTCTCCCGCTACATGCGT TCCAGTGAGCAGGGAACCAACTCCGTTTCGGCCAGCAATCAGCCCCAGCT GTTGGGCAAGCACAAGAAGGCGACGCCATCGAAGAGCCAGTCGGTGGGCA GCAAGCTGGGCTCCGGTGGACCGAAAACAGGGCGGGGTGCCCATTTCATT GGAAAGGGTACCGCTGCAGCGGTGGCTGCAGTAGCAGCCGCCGAGGAGGA AGCTAACCAGGCTGAGGCTGCAGCGCTGGCGAACAAGCGGTTGGGCCAGT CCATTGGTCTTCGGCTGCGCAATCTGCTCAAGTTGCCCAAAGCGCACAAG TGGGCCATAGCCGAGTGGTTCTACTCGTACGTTGACAAGCCGCTATTCGA ATGCCGTGATGAGTTTATGAACCATGTGAATGAACTGGCACCCAGGCTGG GCACACGGAGCCTCATTCGCCACGAGTGGGTGAATATTAGGCGGAGGATG GGCAGGCCGCGGCGATGCTCCGCCAAATTTTTCAGCGAGGAGCGCAAGGA GTTGGACCGAAAGCGTCAGGTGATCCGGACCCTGCAATCGCGGAAGCCAG GCGAGTTCAAGGACTCCGTTTCCATGCTATCGGACATGCCTGAGAAAATA CCGATGACACTGCCGCTGGGCACCAAGGTCACTGCCAGATTAAGATCTCC CCAGGACGGGATCTTTGCGGGCACTGTGGCCGCCTACGACTCACTAAACG CCATGTACCGAGTGACCTTCGAACGAATCGGCTTGGGCACACACGCCATC CCCGACTACGAGATTGTGTCGGAGAACTTTCACGAGATGCTGCCTCTGCA CAGCTTCACGAAGGATTTCCGGCCGAACTTGATGAGCATCTATCAAACGA ATAACCTCGGCTTCACCACCAATCTGGGCTTCACGGCAAATCTTACCAAC AACTATCTGCAGAAGAAGGAAAAAATAGACGGCGGTGCAGGAGCGGCAGC TGGAGCGGGATCACTCTACTTCAAGCCACAGAAGCACCTGGCCACCAATA ATGCGGCTGCACGAAATGCGCTCAGCATGAAGCTGAACAAGAGTGATCCG CTGCTGGGACAGGATTCGGTGGGCGTGAGTCCCATTCGGCAGCAGTTGAC GAGAAATCGCGGCTACTCCACCTCGCTGTTGGAGCACCTGGTGCGCCTGG AGAAGTACATTGCAGTTAAGGCGGATCGAATCCAGCGGCTCAACAAGATG AACGGCACCGCCGAGCTGGCCATGGGCGATATGATAAGCCATGACGAGAA TGGGGATCGCCATCGCCGACAGATTGCAGTCAACTTCCAGCGCCAGTATG CCTTCAACATCGTGACCATCGAGCGCATCAACGCCGAGCTCATGTTCGAG CTCACCAAGGTGCAGGAGCTGTCCTCCAGCCTGACACGCAATCCCAATGT CCAGGCCATGATTTCGCCGACATATTTGCGCGAAGAGTGCCGCGCCAAGG CGTCACAGACGGTCGACGACATCAACAAGGGCATGGTGAAGAATACGCGG ATGATAAAGCTGCTGAAGGACCTGACCACGCTGTTGATCGTGACCCAGAA TCTCGGCGGCGACTGCGAAGTGAGCGAGGTTAACGAGGTGCTCGAAGGCT GCCTCGAGGAAGTGCGCAGCAATCTAATCTGCAGCGAAAACCGCGAGGTG TTCCAGATGAGTGTCCAGGGGCGGCTGGAGTACATAGCCATGGACATCAG CAGACGCTTGGAGGAGAAGAGCTTGAGTCGCGTGGCGGATGGCGACGACG ATATTAAATCGCTGAAATCCGAGGACGAGACCGATGAGGACCATGTGCAG GATCACAAGCATGGGGCAGATGAGGAGCCCGCCGCAGATACCTCCAAGAC AAAAGCGAAAGGCAGTCCAAAGCAGGTTGAAGGGAAGGAGAACAGCGAAG TTGACAAGATGGACCACAGTAGCCATCCCATGGACACAGACACAGAGAAG GAAGAGAAACTGGAATCTGGCGGGTCGGAAAACGCAGGGTATGCGAGCCA GCAGCGACAAGACGAGGATCAGGACACCGAGGAGCAGCACCTCGATCTGG AGGAGCAGCACCTGGACCCGGAGGAGCATCACCTGGACCTGGAGGAGCAG CACCTGGACCCGGAGGAGCAGCACCTGGACCTGGAGGAGCACCACCTGGA ACTGGAGGAGCAGCACCTGGACCCGGAGGAGCAGTCACTCAATCCGGCTG TGACCGAGGACACGCAGATCACCATTGAGTCGATGAAGGAATCCGATGAG GAGTTTCAATCGGCCGCCGAGACCGAGGAGGACGACATGGTCGGCCTGAT CATGGAAGAAGAGGAGGAAGAGGAGTTTGTGTACGATAAGGATCTGTAGA GGACTAATCGATGTCCAATACCCGCATCTTTAGTCTCTTTTCTACGCCGG CCTCCTGGACTTTAGCTTAGGTAAAAGTTTTCGTGAAAAGTTTTCAATAA TACGCTGCAATAGGAAATTTAACAAAATAATCCGCATAGCTTTCTGACTG ACTATCGTTTTTTTTTTTAAATACCAGGAAAGGGTTTTTAAAAATTCAAA AAGCATTGGTACTATTACACTTTTTTAAATATTGCATTGACTTTGTAAGA AAGTTTAATAACAAATTTATAGCAAGTCTTCAATAAACAAGAAAATATTT TTTTTTACAAATTTTGAATTTTTCTAAGTGGAACATTTTTTGCGAGAAAT GTGAAAAAATAAAAATGTTCAGGCTTGAATGTCAAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mip130-RA | 3071 | mip130-RA | 23..3071 | 1..3049 | 15245 | 100 | Plus |
eIF2B-epsilon-RB | 2500 | eIF2B-epsilon-RB | 2347..2500 | 3434..3281 | 770 | 100 | Minus |
eIF2B-epsilon-RA | 2493 | eIF2B-epsilon-RA | 2347..2493 | 3434..3288 | 735 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1810819..1814161 | 91..3433 | 16700 | 100 | Plus |
chrX | 22417052 | chrX | 1802108..1802198 | 1..91 | 455 | 100 | Plus |
chrX | 22417052 | chrX | 1813492..1813611 | 2722..2841 | 450 | 91.7 | Plus |
chrX | 22417052 | chrX | 1813457..1813549 | 2792..2884 | 375 | 93.5 | Plus |
chrX | 22417052 | chrX | 1813520..1813612 | 2729..2821 | 375 | 93.5 | Plus |
chrX | 22417052 | chrX | 1813534..1813612 | 2722..2800 | 260 | 88.6 | Plus |
chrX | 22417052 | chrX | 1813562..1813611 | 2729..2778 | 205 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 1916976..1920319 | 91..3434 | 16720 | 100 | Plus |
X | 23542271 | X | 1908265..1908355 | 1..91 | 455 | 100 | Plus |
X | 23542271 | X | 1919649..1919768 | 2722..2841 | 450 | 91.7 | Plus |
X | 23542271 | X | 1919614..1919706 | 2792..2884 | 375 | 93.5 | Plus |
X | 23542271 | X | 1919677..1919769 | 2729..2821 | 375 | 93.5 | Plus |
X | 23542271 | X | 1919691..1919769 | 2722..2800 | 260 | 88.6 | Plus |
X | 23542271 | X | 1919719..1919768 | 2729..2778 | 205 | 94 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1802108..1802198 | 1..91 | 100 | -> | Plus |
chrX | 1810820..1814056 | 92..3328 | 98 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip130-RA | 1..2961 | 89..3049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip130-RA | 1..2961 | 89..3049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip130-RA | 1..2961 | 89..3049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip130-RA | 1..2961 | 89..3049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip130-RA | 1..2961 | 89..3049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip130-RA | 23..3071 | 1..3049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip130-RA | 53..3485 | 1..3433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip130-RA | 53..3485 | 1..3433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip130-RA | 23..3071 | 1..3049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip130-RA | 27..3459 | 1..3433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1908265..1908355 | 1..91 | 100 | -> | Plus |
X | 1916977..1920318 | 92..3433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1908265..1908355 | 1..91 | 100 | -> | Plus |
X | 1916977..1920318 | 92..3433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1908265..1908355 | 1..91 | 100 | -> | Plus |
X | 1916977..1920318 | 92..3433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1802298..1802388 | 1..91 | 100 | -> | Plus |
arm_X | 1811010..1814351 | 92..3433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1925075..1928416 | 92..3433 | 100 | Plus | |
X | 1916363..1916453 | 1..91 | 100 | -> | Plus |
Translation from 88 to 3048
> LD07342.pep MLTGRPVRMSVAVNQKGWGKKAGASVSDSAIRTQSALSEGGGAIDVRPME HDEEINREDLNLDEDDEMEEEEEEEHADEEDDDEEPDSNENSAPEEQVEP PAFSLATLGLQRVGSAPPPKPKVQKAPIPTLNARGMPARIRKRNRLFYDE NIINDDKPLRMSLAPKKTPGRPPQSAGGGSSQKIPLTPSKVLKKRKGVVS RYMRSSEQGTNSVSASNQPQLLGKHKKATPSKSQSVGSKLGSGGPKTGRG AHFIGKGTAAAVAAVAAAEEEANQAEAAALANKRLGQSIGLRLRNLLKLP KAHKWAIAEWFYSYVDKPLFECRDEFMNHVNELAPRLGTRSLIRHEWVNI RRRMGRPRRCSAKFFSEERKELDRKRQVIRTLQSRKPGEFKDSVSMLSDM PEKIPMTLPLGTKVTARLRSPQDGIFAGTVAAYDSLNAMYRVTFERIGLG THAIPDYEIVSENFHEMLPLHSFTKDFRPNLMSIYQTNNLGFTTNLGFTA NLTNNYLQKKEKIDGGAGAAAGAGSLYFKPQKHLATNNAAARNALSMKLN KSDPLLGQDSVGVSPIRQQLTRNRGYSTSLLEHLVRLEKYIAVKADRIQR LNKMNGTAELAMGDMISHDENGDRHRRQIAVNFQRQYAFNIVTIERINAE LMFELTKVQELSSSLTRNPNVQAMISPTYLREECRAKASQTVDDINKGMV KNTRMIKLLKDLTTLLIVTQNLGGDCEVSEVNEVLEGCLEEVRSNLICSE NREVFQMSVQGRLEYIAMDISRRLEEKSLSRVADGDDDIKSLKSEDETDE DHVQDHKHGADEEPAADTSKTKAKGSPKQVEGKENSEVDKMDHSSHPMDT DTEKEEKLESGGSENAGYASQQRQDEDQDTEEQHLDLEEQHLDPEEHHLD LEEQHLDPEEQHLDLEEHHLELEEQHLDPEEQSLNPAVTEDTQITIESMK ESDEEFQSAAETEEDDMVGLIMEEEEEEEFVYDKDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19452-PA | 992 | GF19452-PA | 99..992 | 92..984 | 2778 | 68.6 | Plus |
Dana\GF10229-PA | 564 | GF10229-PA | 109..290 | 290..470 | 257 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12891-PA | 930 | GG12891-PA | 1..930 | 9..986 | 3760 | 81.3 | Plus |
Dere\GG14487-PA | 560 | GG14487-PA | 115..297 | 289..470 | 245 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11979-PA | 959 | GH11979-PA | 100..944 | 92..973 | 2107 | 58.2 | Plus |
Dgri\GH16628-PA | 501 | GH16628-PA | 86..272 | 293..478 | 227 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mip130-PA | 986 | CG3480-PA | 1..986 | 1..986 | 5061 | 100 | Plus |
aly-PB | 568 | CG2075-PB | 66..305 | 213..470 | 240 | 27.7 | Plus |
aly-PA | 568 | CG2075-PA | 66..305 | 213..470 | 240 | 27.7 | Plus |
Sh3beta-PE | 485 | CG8582-PE | 135..350 | 776..984 | 162 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14720-PA | 946 | GI14720-PA | 92..911 | 87..958 | 2023 | 55.6 | Plus |
Dmoj\GI11587-PA | 523 | GI11587-PA | 89..260 | 288..459 | 268 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18218-PA | 958 | GL18218-PA | 36..956 | 46..983 | 2579 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27784-PA | 958 | GA27784-PA | 36..956 | 46..983 | 2564 | 60.7 | Plus |
Dpse\GA28313-PA | 706 | GA28313-PA | 103..247 | 295..442 | 182 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19180-PA | 659 | GM19180-PA | 3..659 | 326..986 | 3028 | 92.1 | Plus |
Dsec\GM19179-PA | 255 | GM19179-PA | 1..243 | 9..253 | 1047 | 88.2 | Plus |
Dsec\GM14091-PA | 561 | GM14091-PA | 79..273 | 247..446 | 243 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24729-PA | 894 | GD24729-PA | 7..894 | 88..986 | 4149 | 92.1 | Plus |
Dsim\aly-PA | 568 | GD13362-PA | 84..278 | 247..446 | 236 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16785-PA | 1025 | GJ16785-PA | 109..887 | 88..856 | 2336 | 66.1 | Plus |
Dvir\GJ11265-PA | 486 | GJ11265-PA | 61..245 | 292..476 | 261 | 34.4 | Plus |
Translation from 88 to 3048
> LD07342.hyp MLTGRPVRMSVAVNQKGWGKKAGASVSDSAIRTQSALSEGGGAIDVRPME HDEEINREDLNLDEDDEMEEEEEEEHADEEDDDEEPDSNENSAPEEQVEP PAFSLATLGLQRVGSAPPPKPKVQKAPIPTLNARGMPARIRKRNRLFYDE NIINDDKPLRMSLAPKKTPGRPPQSAGGGSSQKIPLTPSKVLKKRKGVVS RYMRSSEQGTNSVSASNQPQLLGKHKKATPSKSQSVGSKLGSGGPKTGRG AHFIGKGTAAAVAAVAAAEEEANQAEAAALANKRLGQSIGLRLRNLLKLP KAHKWAIAEWFYSYVDKPLFECRDEFMNHVNELAPRLGTRSLIRHEWVNI RRRMGRPRRCSAKFFSEERKELDRKRQVIRTLQSRKPGEFKDSVSMLSDM PEKIPMTLPLGTKVTARLRSPQDGIFAGTVAAYDSLNAMYRVTFERIGLG THAIPDYEIVSENFHEMLPLHSFTKDFRPNLMSIYQTNNLGFTTNLGFTA NLTNNYLQKKEKIDGGAGAAAGAGSLYFKPQKHLATNNAAARNALSMKLN KSDPLLGQDSVGVSPIRQQLTRNRGYSTSLLEHLVRLEKYIAVKADRIQR LNKMNGTAELAMGDMISHDENGDRHRRQIAVNFQRQYAFNIVTIERINAE LMFELTKVQELSSSLTRNPNVQAMISPTYLREECRAKASQTVDDINKGMV KNTRMIKLLKDLTTLLIVTQNLGGDCEVSEVNEVLEGCLEEVRSNLICSE NREVFQMSVQGRLEYIAMDISRRLEEKSLSRVADGDDDIKSLKSEDETDE DHVQDHKHGADEEPAADTSKTKAKGSPKQVEGKENSEVDKMDHSSHPMDT DTEKEEKLESGGSENAGYASQQRQDEDQDTEEQHLDLEEQHLDPEEHHLD LEEQHLDPEEQHLDLEEHHLELEEQHLDPEEQSLNPAVTEDTQITIESMK ESDEEFQSAAETEEDDMVGLIMEEEEEEEFVYDKDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mip130-PA | 986 | CG3480-PA | 1..986 | 1..986 | 5061 | 100 | Plus |
aly-PB | 568 | CG2075-PB | 66..305 | 213..470 | 240 | 27.7 | Plus |
aly-PA | 568 | CG2075-PA | 66..305 | 213..470 | 240 | 27.7 | Plus |
Sh3beta-PE | 485 | CG8582-PE | 135..350 | 776..984 | 162 | 23.6 | Plus |