BDGP Sequence Production Resources |
Search the DGRC for LD07362
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 73 |
Well: | 62 |
Vector: | pBS SK- |
Associated Gene/Transcript | Dip-C-RA |
Protein status: | LD07362.pep: gold |
Preliminary Size: | 1819 |
Sequenced Size: | 1749 |
Gene | Date | Evidence |
---|---|---|
CG5663 | 2001-01-01 | Release 2 assignment |
CG5663 | 2001-10-10 | Blastp of sequenced clone |
CG5663 | 2003-01-01 | Sim4 clustering to Release 3 |
Dip-C | 2008-04-29 | Release 5.5 accounting |
Dip-C | 2008-08-15 | Release 5.9 accounting |
snmRNA:649 | 2008-08-15 | Release 5.9 accounting |
snmRNA:649 | 2008-12-18 | 5.12 accounting |
Dip-C | 2008-12-18 | 5.12 accounting |
1749 bp (1749 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061085
> LD07362.complete CTTTTGCGAAAACAGAAAACAAAAAACACTGATAAAACCCACATAATTTA CTGCCTTTGTTAGCCCGGTTATTGGCTATTATCAGCTAATCTCACTTGCT CGAGCACTCATTGTTGTCCAGAGCGCCAGTTAAACTTTGTCCTCCGTCGC AACACCATGGCCGCCTTTCAGATGGGATCGGGTTACGCAGTGCCCATGAC CCTCTTCCGGAACAACAGGGATCGTGCTGGCAAGGCCATCCTTAAGGAGC TGCTGCCGGGCCTCAAGTTCAACGACGGCAACCTGCTGGTGCTCCTCGAG GGCGGCAAGGACCAGAGCCTGTACAACACCGACGTGGACTACGTTTTCCG GCAGGAGTCCTATTTCCAGTACTTGTTCGGTGTCAAGGAGCCGGGCTGCT ACGGCATCCTAACCATTGATGTGAAAACTGGTGCACAGAAAAGTGTTCTC TTTGTTCCTCGCTTTCCCGATGAGTACGGCACCTGGATGGGCGAACTGCT TGGGCTGCAGGAGTTCAAGGCCATGTACGAGGTGGACGAGGTGTTTTATG TTGACGAAATGAGTGTTTATCTGGAGGGGGCGTCGCCCAAGCTGATACTC ACATTGAGTGGCACCAACAGCGATAGCGGGCTCACCCTTCAGCCGCCCGA CTTTGCTGGCAAGGAGAAGTATGTGACTGACTGCAATCTGCTGTATCCAA TTCTCTCTGAGTGCCGAGTGATCAAGTCACCCGAAGAGATCGAGGTGCTG CGCTACGTGGCCAAGGTATCCTCGGACGCGCACATCAAGGTGATGCGGTT TATGCGTCCCGGTAGAATGGAATTTGAGGGCGAATCCCTGTTCCTGCACC ACGCCTACTCCGTGGGCGGCTGCCGGCATGCCTCCTACACCTGCATATGC GGCAGCGGAACGAACTCGTCGATCTTGCACTATGGACACGCGGGCGCACC CAACAGCAAGCCCGTCCAGGATGGTGATCTCTGCCTGTTCGATATGGGAG CCAACTATTGTGGCTATGCGGCCGACATAACCTGCACATTCCCGGCCAAT GGAAAGTTCACCGACGACCAGAAGTTCATCTACAATGCCGTGCTGGATGC CCGCAATGCGGTCACAGAGTCAGCCCGTGACGGAGTCTCCTGGGTGGACA TGCACAAGCTGGCGGGCAGGGTGTTGCTGCAGCGCCTGAAGGAGGGCGGC ATGCTCAAGGGCGATGTGGAGGAGATGCTCGAGGCAGGTGTTTCGGGCGT GTTCCAGCCACATGGCCTGGGCCACTTGATCGGTCTGGATGTGCACGACG TGGGCGGCTATCTGCCCAAGGAGCCCAAGCGCCCCAGTGAACCGTGGCTG AGCAAGCTGCGCTTTGCCCGCATCCTTAAGGCCGGCATGTATGTCACAAT CGAACCCGGCTGCTACTTCATCAACTGGCTGATGGACCGCGCTCTGGCCG ATCCGAACATTGCTAAATTCATTAACGCAGAGATGTTCAATCGCTTCCGG AATTTCGGAGGTGTGCGCATCGAGGACGATGTGCTCATCACGAAGACTGG CGTGGAGAACTTTGCGATTGTGCCGCGAACGGTGGAGGACATCGAGGCAA CCATGACCTGTAAATATGATTCGCCGGTTTAGAGCTTTTAAACTATATTC CACGCGTAAACATATGTAATATAATCTGTATCATAATCAAATTATGGAAT ACCCAATAAATAAATAAGGTCTCATCAGTTGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 8237198..8238928 | 1731..1 | 8655 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
snmRNA:649-RA | 59 | CR33685-RA | 1..59 | 94..152 | 295 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12411808..12413539 | 1732..1 | 8660 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 12152639..12154370 | 1732..1 | 8660 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8237198..8238928 | 1..1731 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-C-RA | 1..1476 | 157..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-C-RA | 1..1476 | 157..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-C-RA | 1..1476 | 157..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-C-RA | 1..1476 | 157..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-C-RA | 1..1476 | 157..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
snmRNA:649-RA | 1..59 | 94..152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-C-RA | 200..1930 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-C-RA | 200..1930 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-C-RA | 1..1731 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-C-RA | 200..1930 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-C-RA | 17..1747 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12411809..12413539 | 1..1731 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12411809..12413539 | 1..1731 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12411809..12413539 | 1..1731 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8237531..8239261 | 1..1731 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12152640..12154370 | 1..1731 | 100 | Minus |
Translation from 156 to 1631
> LD07362.pep MAAFQMGSGYAVPMTLFRNNRDRAGKAILKELLPGLKFNDGNLLVLLEGG KDQSLYNTDVDYVFRQESYFQYLFGVKEPGCYGILTIDVKTGAQKSVLFV PRFPDEYGTWMGELLGLQEFKAMYEVDEVFYVDEMSVYLEGASPKLILTL SGTNSDSGLTLQPPDFAGKEKYVTDCNLLYPILSECRVIKSPEEIEVLRY VAKVSSDAHIKVMRFMRPGRMEFEGESLFLHHAYSVGGCRHASYTCICGS GTNSSILHYGHAGAPNSKPVQDGDLCLFDMGANYCGYAADITCTFPANGK FTDDQKFIYNAVLDARNAVTESARDGVSWVDMHKLAGRVLLQRLKEGGML KGDVEEMLEAGVSGVFQPHGLGHLIGLDVHDVGGYLPKEPKRPSEPWLSK LRFARILKAGMYVTIEPGCYFINWLMDRALADPNIAKFINAEMFNRFRNF GGVRIEDDVLITKTGVENFAIVPRTVEDIEATMTCKYDSPV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17046-PA | 486 | GF17046-PA | 1..484 | 1..484 | 2285 | 86.6 | Plus |
Dana\GF20449-PA | 543 | GF20449-PA | 127..513 | 45..465 | 344 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17129-PA | 491 | GG17129-PA | 1..491 | 1..491 | 2599 | 98.2 | Plus |
Dere\GG18008-PA | 545 | GG18008-PA | 123..529 | 42..479 | 310 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17466-PA | 486 | GH17466-PA | 1..486 | 1..486 | 2139 | 80 | Plus |
Dgri\GH12088-PA | 516 | GH12088-PA | 96..495 | 35..465 | 311 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dip-C-PB | 491 | CG5663-PB | 1..491 | 1..491 | 2602 | 100 | Plus |
Dip-C-PA | 491 | CG5663-PA | 1..491 | 1..491 | 2602 | 100 | Plus |
CG9581-PA | 545 | CG9581-PA | 124..510 | 45..465 | 304 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22790-PA | 486 | GI22790-PA | 1..486 | 1..486 | 2207 | 81.9 | Plus |
Dmoj\GI11096-PA | 489 | GI11096-PA | 82..468 | 45..465 | 346 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27178-PA | 486 | GL27178-PA | 1..486 | 1..486 | 2297 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19042-PA | 486 | GA19042-PA | 1..486 | 1..486 | 2292 | 85.2 | Plus |
Dpse\GA21891-PA | 542 | GA21891-PA | 118..505 | 45..466 | 328 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26012-PA | 491 | GM26012-PA | 1..491 | 1..491 | 2614 | 98.6 | Plus |
Dsec\GM22689-PA | 254 | GM22689-PA | 34..219 | 247..465 | 199 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20570-PA | 469 | GD20570-PA | 1..469 | 1..491 | 2452 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22793-PA | 486 | GJ22793-PA | 1..486 | 1..486 | 2233 | 83.3 | Plus |
Dvir\GJ15780-PA | 518 | GJ15780-PA | 111..497 | 45..465 | 324 | 27.6 | Plus |
Translation from 156 to 1631
> LD07362.hyp MAAFQMGSGYAVPMTLFRNNRDRAGKAILKELLPGLKFNDGNLLVLLEGG KDQSLYNTDVDYVFRQESYFQYLFGVKEPGCYGILTIDVKTGAQKSVLFV PRFPDEYGTWMGELLGLQEFKAMYEVDEVFYVDEMSVYLEGASPKLILTL SGTNSDSGLTLQPPDFAGKEKYVTDCNLLYPILSECRVIKSPEEIEVLRY VAKVSSDAHIKVMRFMRPGRMEFEGESLFLHHAYSVGGCRHASYTCICGS GTNSSILHYGHAGAPNSKPVQDGDLCLFDMGANYCGYAADITCTFPANGK FTDDQKFIYNAVLDARNAVTESARDGVSWVDMHKLAGRVLLQRLKEGGML KGDVEEMLEAGVSGVFQPHGLGHLIGLDVHDVGGYLPKEPKRPSEPWLSK LRFARILKAGMYVTIEPGCYFINWLMDRALADPNIAKFINAEMFNRFRNF GGVRIEDDVLITKTGVENFAIVPRTVEDIEATMTCKYDSPV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dip-C-PB | 491 | CG5663-PB | 1..491 | 1..491 | 2602 | 100 | Plus |
Dip-C-PA | 491 | CG5663-PA | 1..491 | 1..491 | 2602 | 100 | Plus |
CG9581-PA | 545 | CG9581-PA | 124..510 | 45..465 | 304 | 27.4 | Plus |