BDGP Sequence Production Resources |
Search the DGRC for LD07634
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 76 |
Well: | 34 |
Vector: | pBS SK- |
Associated Gene/Transcript | csul-RA |
Protein status: | LD07634.pep: gold |
Preliminary Size: | 2526 |
Sequenced Size: | 1999 |
Gene | Date | Evidence |
---|---|---|
CG3730 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3730 | 2002-06-13 | Blastp of sequenced clone |
CG3730 | 2003-01-01 | Sim4 clustering to Release 3 |
csul | 2008-04-29 | Release 5.5 accounting |
csul | 2008-08-15 | Release 5.9 accounting |
csul | 2008-12-18 | 5.12 accounting |
1999 bp (1999 high quality bases) assembled on 2002-06-13
GenBank Submission: AY122153
> LD07634.complete TCACACTGCTGCCGGTCACCGCATTTTTTGGACTTTTTGAAGAGGCGGTG TGCGGATTGAAAGATGAATTACTACGTCTGTCTGCACCAGGAGGGTGTTA ATAGCATACCCAAGTTAATCGAGAAGGCCTTCGCGAACAACTATAATGTG GTTTCCACCTCTATCAACGCCAATATGTTGCCCTTCGAACCACACGAATC GGATCCCACATATCCGGCCACAATTTTGAGCGGCAGCGACTGGAATTCCA AGGTGATATTTACCATGTCCGACGTGAATGTGGACTCGCCGAATGACAAG CTGCGCGAACACGCAAAGGAGGTATTCATGAGGGACGTGGCCTGGGCGGA GCACCTGCAAAATGTGGGCAACCTGATGGTACGGCTGCGCGGTCCGGAAA ACGAGAATCTGGCCTCCATTGTGCTGGCCAAAACAAAGGATGATTTTCCT TCAGGGAACTGGTTCATCCAAGTGCCCATCACCAATCCAGAACTGGCCAC ATTCGAGCACCGAAAGGATGCCACCGCCGAGGAGGTGGCTGAAGCGGAAT CGAATGACCCGTGGAACTGGTGGAATAACCTGCGCATGGTCACCAAACAC AGCACCAAAGTGAAGGTTGTGATAGAGCTAAACGATGCTGATCGACCCAG CAAGGAAACAGTGCGTCGCTGGTTGGGCGAACCAATCGAGGCAATCATCA TTCCGTCTTCCCTGTTCGTCAGAAACCGCTCCAACTACTGTGTGCTGAAG AAGGAGTGGCAGCTCATCGTCGGGCACTTCATCTCGGTACGGGCCAACAT CATCATCTCCACAAATCCCAACGATAAGGCTTTGTGCCAGTACGCGGATT ACGTAAATAAGCTAATTAATGATAACTGCGATAAGCACATGCTAAACAGC TATGAAAACATGCTGGAAATTCCACTGCAGCCTCTTTGCGATAATCTGGA CACCTATACCTATGAGGTATTCGAAACTGATCCTGTCAAATACAAACTCT ATCAGGATGCCGTACAAGCGGCCCTGTTGGATCGAGTAAGCGCTGCGGAG GCTAAAACGAAACTGACAGTTGTAATGCTACTGGGTGGAGGACGAGGTCC TTTAGCGAGAGCTGTTTTCAATGCTGCCGAGTTAACGAAGCGCAAAGTTC GCCTCTACATCATAGAAAAGAATCCCAATGCCATCCGCACCCTCTCCAAC ATGGTTAAAACGCTTTGGGCCGATAAGGATGTTCACATTTTTTCAAAGGA CATGCGGGACTTTTCCCCTCCAGAGCTGGCTGACATCATGGTTTCGGAGT TACTTGGTTCCTTTGGCGATAATGAACTTTCGCCCGAGTGCCTTGATGGA GCACTGAAGCTGCTCAAACCGGATGGAATCAGTATACCCTACAAATCCAC CTCCTACATTAATCCACTGATGTCAGCAGTGCTGCACCAAAATGTCTGCC AATTGTTACCAACCTATCCTGCCTTCGACTACGGCTATGTGTCGCTGCTA AAGAATATTTACCATATTGACGAGCCGCAGGCTCTGTTTGAATTCGTACA TCCTAATCGAGCGGAAAATATTGACAATACTCGCTGCAAGACGGTTTCAT TTAAAGTCAATAAAGATTGCGTGCTGCACGGAATCGGCGGATACTTTGAT ACCCATTTGTACAAGGACATCTGCCTAAGCATCAATCCTCTGACCCATAC GCCTGGCATGTTCTCCTGGTTCCCCATGTTCTTCGCAACGCGTCCAAGAA CTCTGAGGGAGGGACAGACTATATCCATCCAGTTTTGGCGATGCGTGGAT GCAACCAAAGTGTGGTACGAATGGCAGGTGGTCAATTCTCCAGACGATTG GGAGCACCATAACACACGCGGGACAGGTTACAACATGCGATTGTAACAGC AGACGATGTAATAACAACCAATAGCCAAATAATCGGCATAATTTTTTTGA ACTGCAATAAGAATCAAACTAAAGAGACCTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
csul-RA | 2173 | csul-RA | 14..1996 | 1..1983 | 9915 | 100 | Plus |
csul-RB | 1979 | csul-RB | 452..1979 | 454..1981 | 7640 | 100 | Plus |
csul.a | 1957 | csul.a | 448..1957 | 472..1981 | 7550 | 100 | Plus |
csul-RB | 1979 | csul-RB | 14..452 | 1..439 | 2195 | 100 | Plus |
csul.a | 1957 | csul.a | 10..448 | 1..439 | 2195 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12153494..12154006 | 1228..1740 | 2565 | 100 | Plus |
chr2R | 21145070 | chr2R | 12152519..12152979 | 439..899 | 2305 | 100 | Plus |
chr2R | 21145070 | chr2R | 12152037..12152475 | 1..439 | 2195 | 100 | Plus |
chr2R | 21145070 | chr2R | 12154071..12154312 | 1740..1981 | 1210 | 100 | Plus |
chr2R | 21145070 | chr2R | 12153039..12153206 | 898..1065 | 840 | 100 | Plus |
chr2R | 21145070 | chr2R | 12153266..12153429 | 1065..1228 | 820 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16266141..16266653 | 1228..1740 | 2565 | 100 | Plus |
2R | 25286936 | 2R | 16265166..16265626 | 439..899 | 2305 | 100 | Plus |
2R | 25286936 | 2R | 16264684..16265122 | 1..439 | 2195 | 100 | Plus |
2R | 25286936 | 2R | 16266718..16266961 | 1740..1983 | 1220 | 100 | Plus |
2R | 25286936 | 2R | 16265686..16265853 | 898..1065 | 840 | 100 | Plus |
2R | 25286936 | 2R | 16265913..16266076 | 1065..1228 | 820 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16267340..16267852 | 1228..1740 | 2565 | 100 | Plus |
2R | 25260384 | 2R | 16266365..16266825 | 439..899 | 2305 | 100 | Plus |
2R | 25260384 | 2R | 16265883..16266321 | 1..439 | 2195 | 100 | Plus |
2R | 25260384 | 2R | 16267917..16268160 | 1740..1983 | 1220 | 100 | Plus |
2R | 25260384 | 2R | 16266885..16267052 | 898..1065 | 840 | 100 | Plus |
2R | 25260384 | 2R | 16267112..16267275 | 1065..1228 | 820 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12154072..12154312 | 1741..1981 | 100 | Plus | |
chr2R | 12152037..12152475 | 1..439 | 100 | -> | Plus |
chr2R | 12152520..12152979 | 440..899 | 100 | -> | Plus |
chr2R | 12153041..12153206 | 900..1065 | 100 | -> | Plus |
chr2R | 12153267..12153429 | 1066..1228 | 100 | -> | Plus |
chr2R | 12153495..12154006 | 1229..1740 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RA | 1..1833 | 64..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RA | 1..1833 | 64..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RA | 1..1833 | 64..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RA | 1..1833 | 64..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RA | 1..1833 | 64..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RA | 10..1990 | 1..1981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RA | 10..1990 | 1..1981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RA | 33..2013 | 1..1981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RA | 10..1990 | 1..1981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RA | 33..2013 | 1..1981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16266719..16266959 | 1741..1981 | 100 | Plus | |
2R | 16264684..16265122 | 1..439 | 100 | -> | Plus |
2R | 16265167..16265626 | 440..899 | 100 | -> | Plus |
2R | 16265688..16265853 | 900..1065 | 100 | -> | Plus |
2R | 16265914..16266076 | 1066..1228 | 100 | -> | Plus |
2R | 16266142..16266653 | 1229..1740 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16266719..16266959 | 1741..1981 | 100 | Plus | |
2R | 16264684..16265122 | 1..439 | 100 | -> | Plus |
2R | 16265167..16265626 | 440..899 | 100 | -> | Plus |
2R | 16265688..16265853 | 900..1065 | 100 | -> | Plus |
2R | 16265914..16266076 | 1066..1228 | 100 | -> | Plus |
2R | 16266142..16266653 | 1229..1740 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16266719..16266959 | 1741..1981 | 100 | Plus | |
2R | 16264684..16265122 | 1..439 | 100 | -> | Plus |
2R | 16265167..16265626 | 440..899 | 100 | -> | Plus |
2R | 16265688..16265853 | 900..1065 | 100 | -> | Plus |
2R | 16265914..16266076 | 1066..1228 | 100 | -> | Plus |
2R | 16266142..16266653 | 1229..1740 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12152189..12152627 | 1..439 | 100 | -> | Plus |
arm_2R | 12152672..12153131 | 440..899 | 100 | -> | Plus |
arm_2R | 12153193..12153358 | 900..1065 | 100 | -> | Plus |
arm_2R | 12153419..12153581 | 1066..1228 | 100 | -> | Plus |
arm_2R | 12153647..12154158 | 1229..1740 | 100 | -> | Plus |
arm_2R | 12154224..12154464 | 1741..1981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16267918..16268158 | 1741..1981 | 100 | Plus | |
2R | 16265883..16266321 | 1..439 | 100 | -> | Plus |
2R | 16266366..16266825 | 440..899 | 100 | -> | Plus |
2R | 16266887..16267052 | 900..1065 | 100 | -> | Plus |
2R | 16267113..16267275 | 1066..1228 | 100 | -> | Plus |
2R | 16267341..16267852 | 1229..1740 | 100 | -> | Plus |
Translation from 63 to 1895
> LD07634.pep MNYYVCLHQEGVNSIPKLIEKAFANNYNVVSTSINANMLPFEPHESDPTY PATILSGSDWNSKVIFTMSDVNVDSPNDKLREHAKEVFMRDVAWAEHLQN VGNLMVRLRGPENENLASIVLAKTKDDFPSGNWFIQVPITNPELATFEHR KDATAEEVAEAESNDPWNWWNNLRMVTKHSTKVKVVIELNDADRPSKETV RRWLGEPIEAIIIPSSLFVRNRSNYCVLKKEWQLIVGHFISVRANIIIST NPNDKALCQYADYVNKLINDNCDKHMLNSYENMLEIPLQPLCDNLDTYTY EVFETDPVKYKLYQDAVQAALLDRVSAAEAKTKLTVVMLLGGGRGPLARA VFNAAELTKRKVRLYIIEKNPNAIRTLSNMVKTLWADKDVHIFSKDMRDF SPPELADIMVSELLGSFGDNELSPECLDGALKLLKPDGISIPYKSTSYIN PLMSAVLHQNVCQLLPTYPAFDYGYVSLLKNIYHIDEPQALFEFVHPNRA ENIDNTRCKTVSFKVNKDCVLHGIGGYFDTHLYKDICLSINPLTHTPGMF SWFPMFFATRPRTLREGQTISIQFWRCVDATKVWYEWQVVNSPDDWEHHN TRGTGYNMRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13582-PA | 605 | GF13582-PA | 1..605 | 1..610 | 2773 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20586-PA | 605 | GG20586-PA | 1..605 | 1..610 | 3033 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22107-PA | 604 | GH22107-PA | 1..604 | 1..610 | 2559 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
csul-PA | 610 | CG3730-PA | 1..610 | 1..610 | 3264 | 100 | Plus |
csul-PB | 605 | CG3730-PB | 1..605 | 1..610 | 3219 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19242-PA | 604 | GI19242-PA | 1..604 | 1..610 | 2519 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10719-PA | 604 | GL10719-PA | 1..604 | 1..610 | 2568 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17646-PA | 604 | GA17646-PA | 1..604 | 1..610 | 2585 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21676-PA | 605 | GM21676-PA | 1..605 | 1..610 | 3059 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11176-PA | 605 | GD11176-PA | 1..605 | 1..610 | 3014 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20318-PA | 604 | GJ20318-PA | 1..604 | 1..610 | 2580 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20749-PA | 606 | GK20749-PA | 5..606 | 1..610 | 2568 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11771-PA | 605 | GE11771-PA | 1..605 | 1..610 | 3008 | 92.6 | Plus |
Translation from 63 to 1895
> LD07634.hyp MNYYVCLHQEGVNSIPKLIEKAFANNYNVVSTSINANMLPFEPHESDPTY PATILSGSDWNSKVIFTMSDVNVDSPNDKLREHAKEVFMRDVAWAEHLQN VGNLMVRLRGPENENLASIVLAKTKDDFPSGNWFIQVPITNPELATFEHR KDATAEEVAEAESNDPWNWWNNLRMVTKHSTKVKVVIELNDADRPSKETV RRWLGEPIEAIIIPSSLFVRNRSNYCVLKKEWQLIVGHFISVRANIIIST NPNDKALCQYADYVNKLINDNCDKHMLNSYENMLEIPLQPLCDNLDTYTY EVFETDPVKYKLYQDAVQAALLDRVSAAEAKTKLTVVMLLGGGRGPLARA VFNAAELTKRKVRLYIIEKNPNAIRTLSNMVKTLWADKDVHIFSKDMRDF SPPELADIMVSELLGSFGDNELSPECLDGALKLLKPDGISIPYKSTSYIN PLMSAVLHQNVCQLLPTYPAFDYGYVSLLKNIYHIDEPQALFEFVHPNRA ENIDNTRCKTVSFKVNKDCVLHGIGGYFDTHLYKDICLSINPLTHTPGMF SWFPMFFATRPRTLREGQTISIQFWRCVDATKVWYEWQVVNSPDDWEHHN TRGTGYNMRL*