BDGP Sequence Production Resources |
Search the DGRC for LD07728
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 77 |
Well: | 28 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG6683-RA |
Protein status: | LD07728.pep: gold |
Preliminary Size: | 1188 |
Sequenced Size: | 979 |
Gene | Date | Evidence |
---|---|---|
CG6683 | 2001-01-01 | Release 2 assignment |
CG6683 | 2001-10-10 | Blastp of sequenced clone |
CG6683 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6683 | 2008-04-29 | Release 5.5 accounting |
CG6683 | 2008-08-15 | Release 5.9 accounting |
CG6683 | 2008-12-18 | 5.12 accounting |
979 bp assembled on 2007-04-17
GenBank Submission: AY061089
> LD07728.complete ATTTGTTTACATATTTTCATTTGTGTTTATTTTGAAAATATCAAAATGTC GCAGTTCGACACGCGACTTATTGAGCTGGTTAGGGCTAATCCCAAGCTTT ATGAGCGCGAACTTAGAAACGCACCCTACGAAGCGCATAAGAAGCGACAT CCGGAAATCTGGAGCAGCATCGCCACTTCATTAAATTCAGAAGCTAGTGC CTGTGTCAGTCGTTGGAATCATCTGGTGGCCAAACAGCGTCGGGAGCTGG CCAAAGAAAAGGCCGGAGGCACTGGCTCCGATTGGAGTCTTCTGCCGCAT TTGAAATTCCTGCAGCATCACCACCATCCGATTAATCACCGAAATTCGGG TGATCTGAGTAGGAGCACACTGAAATCCAGCGACGAGGTCAACGATGATG AGGATCCGCTCCAGGAGGCCATGGATGAGCAGCTGGCCGTTGCGGGAGCT GCACCAGCACCACCCACAAATCCTGCCCATGCAACGCCAGTGGCTCAAGC AGAAAAGAGGATAGAAGCCCTGCTTGAAGGACTGGGCGAAGCAAACCGAA TTAAGGCGGAGAAACGCATTCTGGCCTACCTATGCAAATGCAATCTGCGC GCCCTGAACGACGAGCAAATCGATGATATAGTTATTTAGGAAGATTGCCA AGATGATATAGTTATAAAGGAAGATTGCCATGATGATAAGTTAAATACAT ACATGCCGTGATAGGATATCAAAAGTAGCAAACATCACTGATCATATAAT TGTTTAATAATTAAGTCATTTTTGTTATAGTTTATATATCTGGACAATTA TCTTAAGCGAATACTAAATAACTTCTTTTTCCAAATGTATGCTTCCCTAA AAAATATTGTTAATCCATTCATTTAACCTAATCTTCGCATCTAATGAAGT TTACTATACAAACTAACTATTGCATTGTATGATATGATAAAACATTAACA CGCCTGTGATTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6683-RA | 1110 | CG6683-RA | 94..1057 | 1..964 | 4820 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 3738..3811 | 749..821 | 115 | 63.5 | Plus |
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 801..840 | 1..41 | 112 | 78 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8505837..8506604 | 194..961 | 99 | <- | Minus |
chr3L | 8506663..8506855 | 1..193 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6683-RA | 1..594 | 46..639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6683-RA | 1..594 | 46..639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6683-RA | 1..594 | 46..639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6683-RA | 1..594 | 46..639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6683-RA | 1..594 | 46..639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6683-RA | 1..960 | 2..961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6683-RA | 1..960 | 2..961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6683-RA | 30..990 | 1..961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6683-RA | 1..960 | 2..961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6683-RA | 30..990 | 1..961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8513874..8514641 | 194..961 | 100 | <- | Minus |
3L | 8514700..8514892 | 1..193 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8513874..8514641 | 194..961 | 100 | <- | Minus |
3L | 8514700..8514892 | 1..193 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8513874..8514641 | 194..961 | 100 | <- | Minus |
3L | 8514700..8514892 | 1..193 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8506974..8507741 | 194..961 | 100 | <- | Minus |
arm_3L | 8507800..8507992 | 1..193 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8506974..8507741 | 194..961 | 100 | <- | Minus |
3L | 8507800..8507992 | 1..193 | 100 | Minus |
Translation from 0 to 638
> LD07728.hyp ICLHIFICVYFENIKMSQFDTRLIELVRANPKLYERELRNAPYEAHKKRH PEIWSSIATSLNSEASACVSRWNHLVAKQRRELAKEKAGGTGSDWSLLPH LKFLQHHHHPINHRNSGDLSRSTLKSSDEVNDDEDPLQEAMDEQLAVAGA APAPPTNPAHATPVAQAEKRIEALLEGLGEANRIKAEKRILAYLCKCNLR ALNDEQIDDIVI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6683-PA | 197 | CG6683-PA | 1..197 | 16..212 | 1027 | 100 | Plus |
CG9948-PC | 218 | CG9948-PC | 7..218 | 15..212 | 206 | 28.7 | Plus |
CG9948-PB | 218 | CG9948-PB | 7..218 | 15..212 | 206 | 28.7 | Plus |
CG9948-PA | 218 | CG9948-PA | 7..218 | 15..212 | 206 | 28.7 | Plus |
Translation from 45 to 638
> LD07728.pep MSQFDTRLIELVRANPKLYERELRNAPYEAHKKRHPEIWSSIATSLNSEA SACVSRWNHLVAKQRRELAKEKAGGTGSDWSLLPHLKFLQHHHHPINHRN SGDLSRSTLKSSDEVNDDEDPLQEAMDEQLAVAGAAPAPPTNPAHATPVA QAEKRIEALLEGLGEANRIKAEKRILAYLCKCNLRALNDEQIDDIVI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10162-PA | 203 | GF10162-PA | 1..203 | 1..197 | 578 | 62.6 | Plus |
Dana\GF23554-PA | 219 | GF23554-PA | 11..219 | 4..197 | 198 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15076-PA | 198 | GG15076-PA | 1..198 | 1..197 | 837 | 86.4 | Plus |
Dere\GG14393-PA | 222 | GG14393-PA | 11..222 | 4..197 | 196 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16194-PA | 209 | GH16194-PA | 6..209 | 3..197 | 460 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6683-PA | 197 | CG6683-PA | 1..197 | 1..197 | 1027 | 100 | Plus |
CG9948-PC | 218 | CG9948-PC | 11..218 | 4..197 | 205 | 28.8 | Plus |
CG9948-PB | 218 | CG9948-PB | 11..218 | 4..197 | 205 | 28.8 | Plus |
CG9948-PA | 218 | CG9948-PA | 11..218 | 4..197 | 205 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13343-PA | 213 | GI13343-PA | 5..213 | 2..197 | 477 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15568-PA | 196 | GL15568-PA | 1..196 | 1..197 | 363 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Ovd-PA | 196 | GA19777-PA | 1..196 | 1..197 | 366 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24933-PA | 199 | GM24933-PA | 1..199 | 1..197 | 948 | 92 | Plus |
Dsec\GM14808-PA | 218 | GM14808-PA | 11..218 | 4..197 | 208 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12981-PA | 199 | GD12981-PA | 1..199 | 1..197 | 898 | 95 | Plus |
Dsim\GD13980-PA | 218 | GD13980-PA | 11..218 | 4..197 | 197 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13172-PA | 216 | GJ13172-PA | 5..216 | 2..197 | 462 | 54.1 | Plus |