BDGP Sequence Production Resources |
Search the DGRC for LD07760
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 77 |
Well: | 60 |
Vector: | pBS SK- |
Associated Gene/Transcript | SelR-RB |
Protein status: | LD07760.pep: gold |
Sequenced Size: | 961 |
Gene | Date | Evidence |
---|---|---|
CG6584 | 2004-01-14 | Blastp of sequenced clone |
SelR | 2008-04-29 | Release 5.5 accounting |
SelR | 2008-08-15 | Release 5.9 accounting |
SelR | 2008-12-18 | 5.12 accounting |
961 bp (961 high quality bases) assembled on 2004-01-14
GenBank Submission: BT011487
> LD07760.complete CGCTGCGTAACATTGCGACGCACGCTTGTTTTCGCCCGCGTTTGGCGCAT TCATAAACAAAAGGCCAAAAATAGAATCAGCACCATTTAGAGCGCTATTC AGCAGATTCACGCCAAGACAGCGACAATCCGGACAAAAGGTATTCCGGAC CAGCAGCGACTATGGATAACAAGAGCGAGAAGGTTACGGTGAACAAGGAG GAGCTGCGCAAGCGCCTGACCCCGGTGCAGTATCAGGTTACCCAGGAGGC GGGCACCGAGCGACCCTTCACAGGTTGCTACAACAAACACTACGAGAAGG GCGTGTACCAGTGCATCGTGTGCCACCAGGATCTGTTCAGCTCGGAGACC AAGTACGACTCGGGATGCGGATGGCCGGCCTTCAACGATGTCCTAGACAA GGGCAAGGTCACGCTGCACCGCGATGCCAGCATACCAGGGGGCAATATTT TACTACTAATCGCACATCCAGAACGTATACGCACTGAGGTCCGCTGCGCC CGCTGCAACGCCCACATGGGTCACGTCTTCGAGGATGGTCCGAAGCCGAC CCGCAAGCGCTACTGCATCAATTCCGCCTCCATTGAGTTCGTGAACGCGG ATCCCGCCACCTCGTCCCCGCCCGTGGCCACGCCCACCGCGGCGCCCATT GCCCAGCAGTGATGCCGAGGATCAACCGCCAAACGGAGGAGGCAAGCCTC AGAGTGTCGTTGCTGTTAAGAAATTTTTCTACGTGTACTTTCTAACTTTC CGCAAATGTGGCCAATTTTAGCTCGTAGTCAAGTCAATCGCCCCTCTGTT TGTGTAAATAGCTAATGTTTTGGTTCGAAATTTGTTCGTTAATTTATACA AACCCAAATACCGAATACTCTGTAACCCCACACATTCAACACAGTACTAA TTTTAAAGTGAGCGCGCTAAATAAACGTGTGTTTTTTACAATAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SelR-RB | 1208 | SelR-RB | 133..1078 | 1..946 | 4730 | 100 | Plus |
SelR.b | 1531 | SelR.b | 560..1404 | 102..946 | 4225 | 100 | Plus |
SelR.a | 955 | SelR.a | 475..953 | 468..946 | 2395 | 100 | Plus |
SelR.a | 955 | SelR.a | 143..478 | 103..438 | 1680 | 100 | Plus |
SelR.b | 1531 | SelR.b | 93..197 | 1..105 | 525 | 100 | Plus |
SelR.a | 955 | SelR.a | 23..127 | 1..105 | 525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 6688893..6689398 | 942..437 | 2530 | 100 | Minus |
chr3R | 27901430 | chr3R | 6692344..6692516 | 275..103 | 865 | 100 | Minus |
chr3R | 27901430 | chr3R | 6692065..6692235 | 439..269 | 855 | 100 | Minus |
chr3R | 27901430 | chr3R | 6693976..6694080 | 105..1 | 525 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 10863351..10863860 | 946..437 | 2550 | 100 | Minus |
3R | 32079331 | 3R | 10866807..10866979 | 275..103 | 865 | 100 | Minus |
3R | 32079331 | 3R | 10866528..10866698 | 439..269 | 855 | 100 | Minus |
3R | 32079331 | 3R | 10868439..10868543 | 105..1 | 525 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 10604182..10604691 | 946..437 | 2550 | 100 | Minus |
3R | 31820162 | 3R | 10607638..10607810 | 275..103 | 865 | 100 | Minus |
3R | 31820162 | 3R | 10607359..10607529 | 439..269 | 855 | 100 | Minus |
3R | 31820162 | 3R | 10609270..10609374 | 105..1 | 525 | 100 | Minus |
3R | 31820162 | 3R | 10606387..10606449 | 542..480 | 165 | 84.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 6688893..6689396 | 439..942 | 100 | <- | Minus |
chr3R | 6692066..6692230 | 274..438 | 100 | <- | Minus |
chr3R | 6692346..6692513 | 106..273 | 100 | <- | Minus |
chr3R | 6693976..6694080 | 1..105 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelR-RE | 58..627 | 93..662 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelR-RE | 58..627 | 93..662 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelR-RE | 58..627 | 93..662 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelR-RE | 58..627 | 93..662 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelR-RE | 58..627 | 93..662 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelR-RB | 115..1056 | 1..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelR-RB | 115..1056 | 1..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelR-RB | 100..1041 | 1..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelR-RB | 115..1056 | 1..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelR-RB | 100..1041 | 1..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10863355..10863858 | 439..942 | 100 | <- | Minus |
3R | 10866529..10866693 | 274..438 | 100 | <- | Minus |
3R | 10866809..10866976 | 106..273 | 100 | <- | Minus |
3R | 10868439..10868543 | 1..105 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10863355..10863858 | 439..942 | 100 | <- | Minus |
3R | 10866529..10866693 | 274..438 | 100 | <- | Minus |
3R | 10866809..10866976 | 106..273 | 100 | <- | Minus |
3R | 10868439..10868543 | 1..105 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10863355..10863858 | 439..942 | 100 | <- | Minus |
3R | 10866529..10866693 | 274..438 | 100 | <- | Minus |
3R | 10866809..10866976 | 106..273 | 100 | <- | Minus |
3R | 10868439..10868543 | 1..105 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 6689077..6689580 | 439..942 | 100 | <- | Minus |
arm_3R | 6692251..6692415 | 274..438 | 100 | <- | Minus |
arm_3R | 6692531..6692698 | 106..273 | 100 | <- | Minus |
arm_3R | 6694161..6694265 | 1..105 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10604186..10604689 | 439..942 | 100 | <- | Minus |
3R | 10607360..10607524 | 274..438 | 100 | <- | Minus |
3R | 10607640..10607807 | 106..273 | 100 | <- | Minus |
3R | 10609270..10609374 | 1..105 | 100 | Minus |
Translation from 161 to 661
> LD07760.pep MDNKSEKVTVNKEELRKRLTPVQYQVTQEAGTERPFTGCYNKHYEKGVYQ CIVCHQDLFSSETKYDSGCGWPAFNDVLDKGKVTLHRDASIPGGNILLLI AHPERIRTEVRCARCNAHMGHVFEDGPKPTRKRYCINSASIEFVNADPAT SSPPVATPTAAPIAQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16176-PA | 251 | GF16176-PA | 42..251 | 1..166 | 803 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17257-PA | 238 | GG17257-PA | 42..238 | 1..166 | 794 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18739-PA | 200 | GH18739-PA | 1..200 | 1..166 | 689 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SelR-PB | 166 | CG6584-PB | 1..166 | 1..166 | 899 | 100 | Plus |
SelR-PE | 208 | CG6584-PE | 43..208 | 1..166 | 899 | 100 | Plus |
SelR-PI | 155 | CG6584-PI | 1..155 | 1..166 | 820 | 93.4 | Plus |
SelR-PA | 155 | CG6584-PA | 1..155 | 1..166 | 820 | 93.4 | Plus |
SelR-PC | 197 | CG6584-PC | 43..197 | 1..166 | 820 | 93.4 | Plus |
SelR-PH | 150 | CG6584-PH | 1..147 | 1..152 | 675 | 80.4 | Plus |
SelR-PJ | 192 | CG6584-PJ | 43..189 | 1..152 | 675 | 80.4 | Plus |
SelR-PG | 157 | CG6584-PG | 1..154 | 1..152 | 670 | 79.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24656-PA | 211 | GI24656-PA | 1..211 | 1..166 | 754 | 70.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12062-PA | 205 | GL12062-PA | 1..205 | 1..166 | 671 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19702-PE | 203 | GA19702-PE | 37..203 | 1..166 | 797 | 89.8 | Plus |
Dpse\GA19702-PB | 167 | GA19702-PB | 1..167 | 1..166 | 791 | 89.8 | Plus |
Dpse\GA19702-PD | 156 | GA19702-PD | 1..156 | 1..166 | 710 | 83.2 | Plus |
Dpse\GA19702-PF | 148 | GA19702-PF | 1..141 | 1..152 | 651 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26142-PA | 250 | GM26142-PA | 43..250 | 1..166 | 835 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20695-PA | 251 | GD20695-PA | 43..251 | 1..166 | 814 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24030-PA | 200 | GJ24030-PA | 1..200 | 1..166 | 706 | 70 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13287-PA | 209 | GK13287-PA | 1..209 | 1..166 | 665 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24659-PA | 252 | GE24659-PA | 45..252 | 1..166 | 846 | 78.8 | Plus |
Translation from 161 to 661
> LD07760.hyp MDNKSEKVTVNKEELRKRLTPVQYQVTQEAGTERPFTGCYNKHYEKGVYQ CIVCHQDLFSSETKYDSGCGWPAFNDVLDKGKVTLHRDASIPGGNILLLI AHPERIRTEVRCARCNAHMGHVFEDGPKPTRKRYCINSASIEFVNADPAT SSPPVATPTAAPIAQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SelR-PB | 166 | CG6584-PB | 1..166 | 1..166 | 899 | 100 | Plus |
SelR-PE | 208 | CG6584-PE | 43..208 | 1..166 | 899 | 100 | Plus |
SelR-PI | 155 | CG6584-PI | 1..155 | 1..166 | 820 | 93.4 | Plus |
SelR-PA | 155 | CG6584-PA | 1..155 | 1..166 | 820 | 93.4 | Plus |
SelR-PC | 197 | CG6584-PC | 43..197 | 1..166 | 820 | 93.4 | Plus |