Clone LD07878 Report

Search the DGRC for LD07878

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:78
Well:78
Vector:pBS SK-
Associated Gene/TranscriptCG6928-RA
Protein status:LD07878.pep: gold
Preliminary Size:2526
Sequenced Size:2308

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6928 2001-01-01 Release 2 assignment
CG6928 2001-11-09 Blastp of sequenced clone
CG6928 2003-01-01 Sim4 clustering to Release 3
CG6928 2008-04-29 Release 5.5 accounting
CG6928 2008-08-15 Release 5.9 accounting
CG6928 2008-12-18 5.12 accounting

Clone Sequence Records

LD07878.complete Sequence

2308 bp (2308 high quality bases) assembled on 2001-11-09

GenBank Submission: AY069371

> LD07878.complete
TGACAGTCAAACAAATATATTTATTTCAATTTCACCGGTAGAAGTGGTAG
CTTTGTGATTTTTTAACTTTAATGTTAAGTGTTAAAAGTTGATACAAAAA
TATAGATCATAATAATCAAAAATAGAAGCCATGAGCCTGAGGAAGTGGGG
ATACCGCCTGCTGCCGGGTCTAAAGTGGCTGCACGGTTATACTGGCCAAG
ATGCAGTTGCGGATCTGATAGCCGGAGTGACGGTCGGCCTGACGGTGTTG
CCCCAAGGACTGGCCTACGCTACGCTGGCGGGACTGGAGCCCCAATATGG
TCTGTACTCCGCCTTTGTGGGCGGTATTATATACGCCATGCTGGGCAGCT
GCCGGCAGGTGACCATTGGACCCACGGCTTTGCTCGCACTGATGACAAGC
CGGCACACGGGATTTGGACTGGGATCGGGTCCAGCGTACGCGATACTTTT
GTGCCTCATCTCTGGTGTTGTGGAGCTGGGTATGGCAGTGCTGAAACTGG
GTGCCCTGGTGGACCTGATATCACTGCCAGTTACCGTGGGATTCACCTCG
GCCACCGCCGTCATCATTGGCACCTCGCAGCTAAAGGGTTTGCTGGGACT
GCGTGGTGGATCCGGGTCTGATTTCATCAATACCATGCGCTCCGTGTTCG
GAAATCTACACAAAGTTAGAACTGGTGATTTTACCCTTGGTTTGACTTCC
ATTATAGTTTTGCTACTTCTGCGGAAACTAAAAGACGTTAAGCTGGATGG
TCGAATCCGGAACTTGCGAACACAGCAGCTTGTAAGTGGTAGCATCTGGG
TAATAGGCACCGGTCGGAATGCGCTGGTCGTACTGGTGACCAGTGTGCTG
GCCTACAGCACATGTGAGCAGATGGAGAGCTGCCCGTTCATCCTTACTGG
AAAGGTCAAAAGCGGTCTGCCCAACGTTTCACTGCCAAAGTTTGAGACCA
CCATACTGGACAGGAATGGCACTGAGATCAGACAGAACTTTGAACAGATG
CTCTCGGAACTGGGCCCTTCCATGCTAATCCTACCCATTATAGCTGTGCT
TGGAAATGTAGCCATTTCGAAAGCCTTTGGAGGAGCTGGACTGAGTCCGA
CGCGGGAACTGGTTGCACTTTCCATGAGCAACATTTGTGGCGCGTTCTGC
AGCTCCATGCCGGTGACAGGATCCTTCTCGCGCAGCGCTGTTAACCACGC
CAGTGGAGTAAGGACGCCGCTTGGAGGCTGCTACACAAGCGTGCTGGTTC
TGTTGGCACTCGGCCTCCTGGCACCTTATTTCCAGTACATCCCGAAGGCT
GCTCTCAGTGCGGTTATCATCTCGGCGGTGATATTCATGATTGAGTTCGA
GGTCATTAAGCCGCTGTGGCGGTGCAGCCGGCGGGAGCTGCTTCCAGGTG
CCATTACATTCGTAATGAGTCTGGCTGTGGGCGTCGAGATCGGTCTTCTG
CTGGGCGTGAGTACCGATGTGGCGTTTCTGGTTTACCGAGCCGCTCGACC
CGTACTGAGTGTCTCCAAACTGCAAACCACCAATGGCATCAATTATATTC
TGATTCGCCCTAAGCACAGTTCACTGTACTTCCCGGCAGTCGAATGGGTT
CGTTCGGGCATCTCAAAAGCTCTGACCATTCATGGAACCGCACCTGTGGT
CTTGGATTGCGCCCACGTGCATGAATTCGATTTTACGGCAGCTCGCGGAA
TGGGCTCATTGCAAAAGGAGCTCGCCAAGGCGAATGCACCTTTGTTTCTG
ATGAGTGCGGACAAGACTATTGGTGTGATCCTCAAGGAGTCGACTAATAT
TGATTTCCCCACGATAGACTGCCCCGATGATCTGGAATTCCTTTTGGAGC
AAACTGCCGACTACGTTCTGCATTTGCAGATTTCAGCACCGCTCGTCGAG
TCCCGCTTGGTACATGGCGATAGTGGCGAACCAACTGAACTGAGTAAACT
TAATGGAAAATCTTCGTAGATAAAAGAGAACTACCATTGTTAATTTTATA
TGTACTTAAGTATACGTTGGAACACACAACTTATTTATGGAAAGTTCACT
CTCATGCTAGTATACAAATTAGCATTTAAAGCTCTCTAAACTTCCTATTT
ATTAATCTTAAATACGCCCACATTTCATTTCAAACTATTTCATTCCTATG
TTTTATTCTCCCCCGAAATGTTTAAGCTTTAATTGTACATACACACACAT
ATATATAAGTTCACATAATTGTTTTAAATTTTGTTCATAAATTTAAATAC
TCTTAAATGTGAAAATTTGTAATATATTCTGCAAACGTTAAAAAAAAAAA
AAAAAAAA

LD07878.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:56:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG6928-RB 2324 CG6928-RB 25..2317 1..2293 11465 100 Plus
CG6928-RA 2476 CG6928-RA 302..2475 120..2293 10870 100 Plus
CG6928.a 1956 CG6928.a 154..1889 120..1855 8680 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:21:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11997292..11997965 1000..1673 3325 99.6 Plus
chr3L 24539361 chr3L 11996052..11996656 120..724 3025 100 Plus
chr3L 24539361 chr3L 11998415..11998850 1854..2289 2180 100 Plus
chr3L 24539361 chr3L 11996714..11996990 724..1000 1370 99.6 Plus
chr3L 24539361 chr3L 11998019..11998199 1673..1853 905 100 Plus
chr3L 24539361 chr3L 11993976..11994094 1..119 595 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:54:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:21:46
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12006493..12007166 1000..1673 3370 100 Plus
3L 28110227 3L 12005254..12005858 120..724 3025 100 Plus
3L 28110227 3L 12007616..12008055 1854..2293 2200 100 Plus
3L 28110227 3L 12005916..12006192 724..1000 1385 100 Plus
3L 28110227 3L 12007220..12007400 1673..1853 905 100 Plus
3L 28110227 3L 12003176..12003294 1..119 595 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:21:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11999593..12000266 1000..1673 3370 100 Plus
3L 28103327 3L 11998354..11998958 120..724 3025 100 Plus
3L 28103327 3L 12000716..12001155 1854..2293 2200 100 Plus
3L 28103327 3L 11999016..11999292 724..1000 1385 100 Plus
3L 28103327 3L 12000320..12000500 1673..1853 905 100 Plus
3L 28103327 3L 11996276..11996394 1..119 595 100 Plus
Blast to na_te.dros performed 2019-03-15 18:21:46
Subject Length Description Subject Range Query Range Score Percent Strand
INE-1 611 INE-1 INE1 611bp Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6). 385..450 2213..2277 120 66.7 Plus
hobo 2959 hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). 486..671 2004..1820 117 55.3 Minus

LD07878.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:22:30 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11993976..11994094 1..119 100 -> Plus
chr3L 11996052..11996656 120..724 100 -> Plus
chr3L 11996715..11996990 725..1000 99 -> Plus
chr3L 11997293..11997965 1001..1673 99 -> Plus
chr3L 11998020..11998199 1674..1853 100 -> Plus
chr3L 11998415..11998850 1854..2289 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:40:41 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
CG6928-RA 1..1839 131..1969 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:27:59 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
CG6928-RA 1..1839 131..1969 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:00:34 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
CG6928-RB 1..1839 131..1969 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:55:36 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
CG6928-RA 1..1839 131..1969 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:59:48 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
CG6928-RB 1..1839 131..1969 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:04:59 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
CG6928-RB 1..2289 1..2289 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:27:59 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
CG6928-RB 1..2289 1..2289 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:00:34 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
CG6928-RB 22..2310 1..2289 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:55:36 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
CG6928-RB 1..2289 1..2289 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:59:48 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
CG6928-RB 22..2310 1..2289 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:22:30 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12003176..12003294 1..119 100 -> Plus
3L 12005254..12005858 120..724 100 -> Plus
3L 12005917..12006192 725..1000 100 -> Plus
3L 12006494..12007166 1001..1673 100 -> Plus
3L 12007221..12007400 1674..1853 100 -> Plus
3L 12007616..12008051 1854..2289 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:22:30 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12003176..12003294 1..119 100 -> Plus
3L 12005254..12005858 120..724 100 -> Plus
3L 12005917..12006192 725..1000 100 -> Plus
3L 12006494..12007166 1001..1673 100 -> Plus
3L 12007221..12007400 1674..1853 100 -> Plus
3L 12007616..12008051 1854..2289 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:22:30 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12003176..12003294 1..119 100 -> Plus
3L 12005254..12005858 120..724 100 -> Plus
3L 12005917..12006192 725..1000 100 -> Plus
3L 12006494..12007166 1001..1673 100 -> Plus
3L 12007221..12007400 1674..1853 100 -> Plus
3L 12007616..12008051 1854..2289 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:00:34 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11996276..11996394 1..119 100 -> Plus
arm_3L 11998354..11998958 120..724 100 -> Plus
arm_3L 11999017..11999292 725..1000 100 -> Plus
arm_3L 11999594..12000266 1001..1673 100 -> Plus
arm_3L 12000321..12000500 1674..1853 100 -> Plus
arm_3L 12000716..12001151 1854..2289 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:31:39 Download gff for LD07878.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11998354..11998958 120..724 100 -> Plus
3L 11999017..11999292 725..1000 100 -> Plus
3L 11999594..12000266 1001..1673 100 -> Plus
3L 12000321..12000500 1674..1853 100 -> Plus
3L 12000716..12001151 1854..2289 100   Plus
3L 11996276..11996394 1..119 100 -> Plus

LD07878.pep Sequence

Translation from 130 to 1968

> LD07878.pep
MSLRKWGYRLLPGLKWLHGYTGQDAVADLIAGVTVGLTVLPQGLAYATLA
GLEPQYGLYSAFVGGIIYAMLGSCRQVTIGPTALLALMTSRHTGFGLGSG
PAYAILLCLISGVVELGMAVLKLGALVDLISLPVTVGFTSATAVIIGTSQ
LKGLLGLRGGSGSDFINTMRSVFGNLHKVRTGDFTLGLTSIIVLLLLRKL
KDVKLDGRIRNLRTQQLVSGSIWVIGTGRNALVVLVTSVLAYSTCEQMES
CPFILTGKVKSGLPNVSLPKFETTILDRNGTEIRQNFEQMLSELGPSMLI
LPIIAVLGNVAISKAFGGAGLSPTRELVALSMSNICGAFCSSMPVTGSFS
RSAVNHASGVRTPLGGCYTSVLVLLALGLLAPYFQYIPKAALSAVIISAV
IFMIEFEVIKPLWRCSRRELLPGAITFVMSLAVGVEIGLLLGVSTDVAFL
VYRAARPVLSVSKLQTTNGINYILIRPKHSSLYFPAVEWVRSGISKALTI
HGTAPVVLDCAHVHEFDFTAARGMGSLQKELAKANAPLFLMSADKTIGVI
LKESTNIDFPTIDCPDDLEFLLEQTADYVLHLQISAPLVESRLVHGDSGE
PTELSKLNGKSS*

LD07878.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:33:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24058-PA 612 GF24058-PA 1..611 1..611 2831 92.1 Plus
Dana\GF16995-PA 650 GF16995-PA 74..643 4..579 1107 41.5 Plus
Dana\GF22913-PA 676 GF22913-PA 76..614 9..547 996 38.7 Plus
Dana\GF16701-PA 639 GF16701-PA 75..616 6..567 974 39.8 Plus
Dana\GF23321-PA 637 GF23321-PA 66..621 4..562 900 39 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:33:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15551-PA 612 GG15551-PA 1..612 1..612 2835 96.2 Plus
Dere\GG11325-PA 657 GG11325-PA 81..650 4..579 1050 40.8 Plus
Dere\GG11762-PA 676 GG11762-PA 71..614 4..547 995 38.9 Plus
Dere\GG20541-PA 611 GG20541-PA 50..611 6..593 985 38.7 Plus
Dere\GG11924-PA 638 GG11924-PA 66..617 4..558 899 38.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:33:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14647-PA 607 GH14647-PA 9..607 10..608 2514 86.5 Plus
Dgri\GH18514-PA 623 GH18514-PA 72..620 6..566 966 38.8 Plus
Dgri\GH14173-PA 675 GH14173-PA 61..618 1..552 961 37.4 Plus
Dgri\GH11373-PA 675 GH11373-PA 77..620 9..552 957 37.1 Plus
Dgri\GH22023-PA 604 GH22023-PA 39..545 11..538 920 38.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG6928-PA 612 CG6928-PA 1..612 1..612 3073 100 Plus
CG6928-PB 612 CG6928-PB 1..612 1..612 3073 100 Plus
CG6928-PD 579 CG6928-PD 1..579 1..579 2894 99.5 Plus
CG6928-PC 579 CG6928-PC 1..579 1..579 2894 99.5 Plus
Esp-PB 654 CG7005-PB 78..643 4..574 1102 41 Plus
Esp-PA 654 CG7005-PA 78..643 4..574 1102 41 Plus
CG6125-PC 611 CG6125-PC 50..611 6..593 993 39.2 Plus
CG6125-PB 611 CG6125-PB 50..611 6..593 993 39.2 Plus
CG6125-PA 640 CG6125-PA 79..640 6..593 993 39.2 Plus
CG9702-PB 676 CG9702-PB 78..614 11..547 990 39.4 Plus
CG9702-PA 676 CG9702-PA 78..614 11..547 990 39.4 Plus
CG9717-PA 638 CG9717-PA 66..621 4..562 979 38.7 Plus
CG9702-PC 672 CG9702-PC 78..610 11..547 968 39.2 Plus
CG7912-PA 602 CG7912-PA 34..543 8..532 913 37.7 Plus
CG5002-PA 595 CG5002-PA 38..543 12..538 910 38.4 Plus
CG5404-PA 627 CG5404-PA 38..556 3..533 803 32.7 Plus
Prestin-PA 742 CG5485-PA 69..561 4..457 330 24.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:33:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11632-PA 607 GI11632-PA 9..607 10..612 2562 85.6 Plus
Dmoj\GI23990-PA 657 GI23990-PA 86..647 8..574 1072 41.1 Plus
Dmoj\GI18078-PA 670 GI18078-PA 75..618 9..552 980 38.3 Plus
Dmoj\GI24359-PA 626 GI24359-PA 75..624 6..575 954 39.2 Plus
Dmoj\GI24866-PA 676 GI24866-PA 77..620 9..552 950 38 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:33:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17958-PA 617 GL17958-PA 1..617 1..612 2762 89.5 Plus
Dper\GL13790-PA 624 GL13790-PA 79..613 4..574 996 38.6 Plus
Dper\GL17220-PA 595 GL17220-PA 37..582 11..577 889 37.3 Plus
Dper\GL14003-PA 634 GL14003-PA 67..618 4..562 878 37.6 Plus
Dper\GL13488-PA 595 GL13488-PA 33..537 8..532 789 37.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:33:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19961-PA 617 GA19961-PA 1..617 1..612 2762 89.5 Plus
Dpse\GA20023-PA 655 GA20023-PA 79..644 4..574 1115 41.2 Plus
Dpse\GA21975-PA 675 GA21975-PA 71..613 4..554 970 38.5 Plus
Dpse\GA19373-PB 611 GA19373-PB 48..611 6..593 965 38.6 Plus
Dpse\GA19373-PA 637 GA19373-PA 74..637 6..593 962 38.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:33:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25320-PA 633 GM25320-PA 22..633 1..612 3136 98.7 Plus
Dsec\GM12894-PA 676 GM12894-PA 71..614 4..547 1010 39.3 Plus
Dsec\GM26633-PA 621 GM26633-PA 79..614 4..579 1005 40.1 Plus
Dsec\GM25771-PA 661 GM25771-PA 104..661 6..593 895 37.6 Plus
Dsec\GM12143-PA 638 GM12143-PA 66..621 4..562 891 38.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:33:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14351-PA 746 GD14351-PA 282..746 208..612 1879 83.2 Plus
Dsim\GD14351-PA 746 GD14351-PA 1..291 1..291 1411 99 Plus
Dsim\GD21136-PA 654 GD21136-PA 78..647 4..579 1099 40.8 Plus
Dsim\GD15099-PA 669 GD15099-PA 108..649 6..567 973 39.8 Plus
Dsim\GD21533-PA 687 GD21533-PA 71..625 4..547 954 38.2 Plus
Dsim\GD16947-PA 638 GD16947-PA 66..621 4..562 900 38.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:33:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11314-PA 611 GJ11314-PA 9..609 10..610 2511 86 Plus
Dvir\GJ16697-PA 679 GJ16697-PA 80..623 9..552 968 38.8 Plus
Dvir\GJ24510-PA 677 GJ24510-PA 77..673 9..608 957 35.7 Plus
Dvir\GJ23000-PA 632 GJ23000-PA 62..617 4..562 932 38.7 Plus
Dvir\GJ24369-PA 624 GJ24369-PA 73..621 6..573 922 39.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16963-PA 614 GK16963-PA 1..611 1..609 2725 89.7 Plus
Dwil\GK22488-PA 656 GK22488-PA 79..645 4..574 1045 40.4 Plus
Dwil\GK11435-PA 633 GK11435-PA 73..616 6..569 1014 41.4 Plus
Dwil\GK14145-PA 674 GK14145-PA 73..621 4..552 1010 38 Plus
Dwil\GK13120-PA 634 GK13120-PA 63..618 4..562 942 39.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21876-PA 612 GE21876-PA 1..612 1..612 3136 98.4 Plus
Dyak\GE23521-PA 654 GE23521-PA 78..643 4..574 1102 41.1 Plus
Dyak\GE10890-PA 676 GE10890-PA 71..614 4..547 1009 39.6 Plus
Dyak\GE26376-PA 611 GE26376-PA 50..611 6..593 977 38.9 Plus
Dyak\GE23374-PA 638 GE23374-PA 66..621 4..562 904 39 Plus

LD07878.hyp Sequence

Translation from 130 to 1968

> LD07878.hyp
MSLRKWGYRLLPGLKWLHGYTGQDAVADLIAGVTVGLTVLPQGLAYATLA
GLEPQYGLYSAFVGGIIYAMLGSCRQVTIGPTALLALMTSRHTGFGLGSG
PAYAILLCLISGVVELGMAVLKLGALVDLISLPVTVGFTSATAVIIGTSQ
LKGLLGLRGGSGSDFINTMRSVFGNLHKVRTGDFTLGLTSIIVLLLLRKL
KDVKLDGRIRNLRTQQLVSGSIWVIGTGRNALVVLVTSVLAYSTCEQMES
CPFILTGKVKSGLPNVSLPKFETTILDRNGTEIRQNFEQMLSELGPSMLI
LPIIAVLGNVAISKAFGGAGLSPTRELVALSMSNICGAFCSSMPVTGSFS
RSAVNHASGVRTPLGGCYTSVLVLLALGLLAPYFQYIPKAALSAVIISAV
IFMIEFEVIKPLWRCSRRELLPGAITFVMSLAVGVEIGLLLGVSTDVAFL
VYRAARPVLSVSKLQTTNGINYILIRPKHSSLYFPAVEWVRSGISKALTI
HGTAPVVLDCAHVHEFDFTAARGMGSLQKELAKANAPLFLMSADKTIGVI
LKESTNIDFPTIDCPDDLEFLLEQTADYVLHLQISAPLVESRLVHGDSGE
PTELSKLNGKSS*

LD07878.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:55:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG6928-PA 612 CG6928-PA 1..612 1..612 3073 100 Plus
CG6928-PB 612 CG6928-PB 1..612 1..612 3073 100 Plus
CG6928-PD 579 CG6928-PD 1..579 1..579 2894 99.5 Plus
CG6928-PC 579 CG6928-PC 1..579 1..579 2894 99.5 Plus
Esp-PB 654 CG7005-PB 78..643 4..574 1102 41 Plus