BDGP Sequence Production Resources |
Search the DGRC for LD07939
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 79 |
Well: | 39 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG10425-RA |
Protein status: | LD07939.pep: gold |
Preliminary Size: | 1503 |
Sequenced Size: | 1370 |
Gene | Date | Evidence |
---|---|---|
CG10425 | 2001-01-01 | Release 2 assignment |
CG10425 | 2001-11-09 | Blastp of sequenced clone |
CG10425 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10425 | 2008-04-29 | Release 5.5 accounting |
CG10425 | 2008-08-15 | Release 5.9 accounting |
CG10425 | 2008-12-18 | 5.12 accounting |
1370 bp (1370 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069373
> LD07939.complete AGAGATTAGAGAATCCGGGAATTATCGCACCCTCTTGAAATTGTCATCAT GGAACTGAGCTGGGAGATAGTGTTCTGCGTGGGCATTGCGGTGCTGGTTC ATGTTCTGGTCTACGTGTTCGTCATGGCCAAGAAACCGAGGAGCATTGTG GGTCGTCATGTGGTGGTCACCGGCGGCTCCAAGGGAATCGGACTCTGTCT GGCGGTGGAGTGCGCCATGAAAGGCGCCAATGTGACGGTGATAGCGCGCG ACGAGAAAATGCTGAGCGGAGCAGTGGCTCTGATGGAAGTGATTCGCCAG CGGCCAGATCAAAAGTTCCAGTACAGAAGTCTGGACATAAGCGGCGATTA TGACCAGGTGGCCAAAGTGCTTGGCGAGATCGAAGATAGCTTCGGCCCCA TATACACTTTAATAAACTGTGCCGGAATGGCCATTTGCGGTGTGTTCGAG GAGGTCTCAGTCCAGGATGTCCACAAGCTGATGAACGTAAACTTCTTCGG CACCTATAACTGCACCCGTTATGTCCTGCCCAAAATGAAGAAAGCCGGCG ACGGCATTATTGTAATCACTGCCTCACAGGCGGCTATGTTTGGCATCTAT GGATACGGTCCTTACTCAGCCACCAAGTACGCCCTGAGAGCGATGGCTGA AACGATTGCAATGGAGTCTCGGGAGCACGGGGTCAGCGTCACTCTGGCCA TGCCCTGCGATACGAATACACCCGGATTCGAGGAGGAGGAGAAGTCAAAG CCCAGGGAAACCAAAATAATCTCTGGTGGAGGAGGTCTCATAGAGCCGGA AGTTATGGCGAAAGCTATACTTAAGGATGCCCTGAAGGGAAAATTCACCT CAACTGTTGGAGCAGAAAGCTGGCTGATCACCACTTTGGGTGGAGCATTG CTTCCTTGGGATGGCTTCTTCACCAATCTTCTGCACGCCATAGTTTTGGG ACCACTGCGAATAGTTAGCTACGCTCTGCACAAGTACTTCAATAGTGTTA TACGCAAATGCGCTCGAGAGGATAAGGCCAAGGCCACATCGCAAGTGGAG TCCAAGTGAAATCTCTCTTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGC CCATAATTAAATCACTTTTTTATAATTAATCAAAATGTGCGATTGTTTTG CATGGTTAGCCTATTCATATATTACAATTCCCGTATTATCATTCATTTTT ATATATATATTTGTATGTGCATTTGAACTTTTTTATTATTGCCGTGCTAG GGTTTTAACTATTTGTATCGTGTTTTCTAGACTAGATGACGTGTGCTCGT TTTGTTGGTGTGTGCTTCGTTTTAACAAAAATAAAATGTATTTACTGTTC AGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10425-RA | 1448 | CG10425-RA | 90..1445 | 1..1356 | 6780 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21084628..21085196 | 834..266 | 2845 | 100 | Minus |
chr3R | 27901430 | chr3R | 21084046..21084564 | 1352..834 | 2595 | 100 | Minus |
chr3R | 27901430 | chr3R | 21085266..21085531 | 266..1 | 1330 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25261545..25262113 | 834..266 | 2845 | 100 | Minus |
3R | 32079331 | 3R | 25260959..25261481 | 1356..834 | 2615 | 100 | Minus |
3R | 32079331 | 3R | 25262183..25262448 | 266..1 | 1330 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25002376..25002944 | 834..266 | 2845 | 100 | Minus |
3R | 31820162 | 3R | 25001790..25002312 | 1356..834 | 2615 | 100 | Minus |
3R | 31820162 | 3R | 25003014..25003279 | 266..1 | 1330 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
transib1 | 2167 | transib1 TRANSIB1 2167bp | 290..360 | 1202..1278 | 127 | 70.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21085267..21085531 | 1..265 | 100 | Minus | |
chr3R | 21084046..21084563 | 835..1352 | 100 | <- | Minus |
chr3R | 21084628..21085196 | 266..834 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10425-RA | 1..1011 | 49..1059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10425-RA | 1..1011 | 49..1059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10425-RA | 1..1011 | 49..1059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10425-RA | 1..1011 | 49..1059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10425-RA | 1..1011 | 49..1059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10425-RA | 47..1398 | 1..1352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10425-RA | 62..1413 | 1..1352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10425-RA | 51..1402 | 1..1352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10425-RA | 47..1398 | 1..1352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10425-RA | 51..1402 | 1..1352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25260963..25261480 | 835..1352 | 100 | <- | Minus |
3R | 25261545..25262113 | 266..834 | 100 | <- | Minus |
3R | 25262184..25262448 | 1..265 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25260963..25261480 | 835..1352 | 100 | <- | Minus |
3R | 25261545..25262113 | 266..834 | 100 | <- | Minus |
3R | 25262184..25262448 | 1..265 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25260963..25261480 | 835..1352 | 100 | <- | Minus |
3R | 25261545..25262113 | 266..834 | 100 | <- | Minus |
3R | 25262184..25262448 | 1..265 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21086685..21087202 | 835..1352 | 100 | <- | Minus |
arm_3R | 21087267..21087835 | 266..834 | 100 | <- | Minus |
arm_3R | 21087906..21088170 | 1..265 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25001794..25002311 | 835..1352 | 100 | <- | Minus |
3R | 25002376..25002944 | 266..834 | 100 | <- | Minus |
3R | 25003015..25003279 | 1..265 | 100 | Minus |
Translation from 48 to 1058
> LD07939.hyp MELSWEIVFCVGIAVLVHVLVYVFVMAKKPRSIVGRHVVVTGGSKGIGLC LAVECAMKGANVTVIARDEKMLSGAVALMEVIRQRPDQKFQYRSLDISGD YDQVAKVLGEIEDSFGPIYTLINCAGMAICGVFEEVSVQDVHKLMNVNFF GTYNCTRYVLPKMKKAGDGIIVITASQAAMFGIYGYGPYSATKYALRAMA ETIAMESREHGVSVTLAMPCDTNTPGFEEEEKSKPRETKIISGGGGLIEP EVMAKAILKDALKGKFTSTVGAESWLITTLGGALLPWDGFFTNLLHAIVL GPLRIVSYALHKYFNSVIRKCAREDKAKATSQVESK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10425-PA | 336 | CG10425-PA | 1..336 | 1..336 | 1723 | 100 | Plus |
CG15629-PA | 325 | CG15629-PA | 49..247 | 28..227 | 209 | 29.1 | Plus |
CG7322-PC | 242 | CG7322-PC | 5..177 | 33..219 | 195 | 31.6 | Plus |
CG7322-PB | 242 | CG7322-PB | 5..177 | 33..219 | 195 | 31.6 | Plus |
CG7322-PA | 242 | CG7322-PA | 5..177 | 33..219 | 195 | 31.6 | Plus |
Translation from 48 to 1058
> LD07939.pep MELSWEIVFCVGIAVLVHVLVYVFVMAKKPRSIVGRHVVVTGGSKGIGLC LAVECAMKGANVTVIARDEKMLSGAVALMEVIRQRPDQKFQYRSLDISGD YDQVAKVLGEIEDSFGPIYTLINCAGMAICGVFEEVSVQDVHKLMNVNFF GTYNCTRYVLPKMKKAGDGIIVITASQAAMFGIYGYGPYSATKYALRAMA ETIAMESREHGVSVTLAMPCDTNTPGFEEEEKSKPRETKIISGGGGLIEP EVMAKAILKDALKGKFTSTVGAESWLITTLGGALLPWDGFFTNLLHAIVL GPLRIVSYALHKYFNSVIRKCAREDKAKATSQVESK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17432-PA | 332 | GF17432-PA | 1..332 | 1..332 | 1642 | 91.3 | Plus |
Dana\GF18273-PA | 321 | GF18273-PA | 19..308 | 11..295 | 216 | 25.9 | Plus |
Dana\GF19246-PA | 242 | GF19246-PA | 7..197 | 35..235 | 196 | 30.6 | Plus |
Dana\GF15490-PA | 325 | GF15490-PA | 49..310 | 28..302 | 194 | 27.3 | Plus |
Dana\GF23376-PA | 334 | GF23376-PA | 16..236 | 26..237 | 192 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12271-PA | 336 | GG12271-PA | 1..336 | 1..336 | 1727 | 95.8 | Plus |
Dere\GG25019-PA | 325 | GG25019-PA | 49..310 | 28..302 | 194 | 27.7 | Plus |
Dere\GG17944-PA | 598 | GG17944-PA | 12..198 | 35..220 | 186 | 29.7 | Plus |
Dere\GG18088-PA | 242 | GG18088-PA | 5..178 | 33..220 | 174 | 31.7 | Plus |
Dere\GG19147-PA | 255 | GG19147-PA | 8..198 | 39..225 | 170 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18974-PA | 340 | GH18974-PA | 1..335 | 1..335 | 1532 | 80.6 | Plus |
Dgri\GH17658-PA | 242 | GH17658-PA | 10..178 | 38..220 | 182 | 30.1 | Plus |
Dgri\GH12555-PA | 601 | GH12555-PA | 11..196 | 35..219 | 182 | 28.9 | Plus |
Dgri\GH11705-PA | 328 | GH11705-PA | 52..298 | 28..286 | 180 | 27.9 | Plus |
Dgri\GH18214-PA | 370 | GH18214-PA | 82..270 | 16..208 | 179 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10425-PA | 336 | CG10425-PA | 1..336 | 1..336 | 1723 | 100 | Plus |
CG15629-PA | 325 | CG15629-PA | 49..247 | 28..227 | 209 | 29.1 | Plus |
CG13833-PA | 321 | CG13833-PA | 15..235 | 7..219 | 201 | 25.8 | Plus |
firl-PE | 318 | CG14946-PE | 31..272 | 11..259 | 198 | 27.7 | Plus |
firl-PC | 318 | CG14946-PC | 31..272 | 11..259 | 198 | 27.7 | Plus |
firl-PD | 318 | CG14946-PD | 31..272 | 11..259 | 198 | 27.7 | Plus |
CG7322-PC | 242 | CG7322-PC | 5..177 | 33..219 | 195 | 31.6 | Plus |
CG7322-PB | 242 | CG7322-PB | 5..177 | 33..219 | 195 | 31.6 | Plus |
CG7322-PA | 242 | CG7322-PA | 5..177 | 33..219 | 195 | 31.6 | Plus |
CG17121-PA | 361 | CG17121-PA | 73..261 | 16..208 | 185 | 24.9 | Plus |
Mfe2-PB | 598 | CG3415-PB | 12..197 | 35..219 | 184 | 29.4 | Plus |
Mfe2-PA | 598 | CG3415-PA | 12..197 | 35..219 | 184 | 29.4 | Plus |
CG7601-PA | 326 | CG7601-PA | 15..236 | 5..219 | 173 | 25.6 | Plus |
CG13284-PE | 325 | CG13284-PE | 48..320 | 30..328 | 157 | 27.2 | Plus |
CG13284-PA | 325 | CG13284-PA | 48..320 | 30..328 | 157 | 27.2 | Plus |
CG13284-PC | 338 | CG13284-PC | 61..333 | 30..328 | 157 | 27.2 | Plus |
CG13284-PD | 339 | CG13284-PD | 62..334 | 30..328 | 157 | 27.2 | Plus |
CG13284-PB | 339 | CG13284-PB | 62..334 | 30..328 | 157 | 27.2 | Plus |
CG3699-PA | 251 | CG3699-PA | 2..248 | 32..294 | 154 | 26.2 | Plus |
CG31548-PA | 256 | CG31548-PA | 2..189 | 32..224 | 150 | 26.3 | Plus |
rdhB-PB | 248 | CG7077-PB | 13..193 | 39..220 | 149 | 28.6 | Plus |
rdhB-PA | 248 | CG7077-PA | 13..193 | 39..220 | 149 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24135-PA | 343 | GI24135-PA | 1..335 | 1..335 | 1560 | 84.2 | Plus |
Dmoj\GI21510-PA | 242 | GI21510-PA | 10..178 | 38..220 | 203 | 32.2 | Plus |
Dmoj\GI11209-PA | 596 | GI11209-PA | 11..197 | 35..220 | 193 | 28.5 | Plus |
Dmoj\GI16082-PA | 327 | GI16082-PA | 51..312 | 28..302 | 191 | 26.5 | Plus |
Dmoj\GI10764-PA | 355 | GI10764-PA | 60..255 | 9..208 | 180 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22109-PA | 334 | GL22109-PA | 1..334 | 1..336 | 1440 | 77.7 | Plus |
Dper\GL27358-PA | 319 | GL27358-PA | 45..275 | 30..265 | 214 | 28.5 | Plus |
Dper\GL21318-PA | 350 | GL21318-PA | 118..286 | 38..220 | 196 | 32.1 | Plus |
Dper\GL19368-PA | 325 | GL19368-PA | 113..310 | 95..302 | 191 | 28.8 | Plus |
Dper\GL15827-PA | 597 | GL15827-PA | 11..196 | 35..219 | 174 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10311-PA | 334 | GA10311-PA | 1..334 | 1..336 | 1445 | 77.7 | Plus |
Dpse\GA12556-PA | 319 | GA12556-PA | 19..275 | 13..265 | 220 | 28.7 | Plus |
Dpse\GA20258-PA | 242 | GA20258-PA | 10..178 | 38..220 | 197 | 32.1 | Plus |
Dpse\GA13859-PA | 325 | GA13859-PA | 113..310 | 95..302 | 191 | 28.8 | Plus |
Dpse\GA17436-PA | 597 | GA17436-PA | 11..196 | 35..219 | 174 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17737-PA | 336 | GM17737-PA | 1..336 | 1..336 | 1746 | 97.3 | Plus |
Dsec\GM22780-PA | 242 | GM22780-PA | 5..178 | 33..220 | 195 | 30.7 | Plus |
Dsec\GM18492-PA | 325 | GM18492-PA | 49..310 | 28..302 | 195 | 27.3 | Plus |
Dsec\GM23600-PA | 321 | GM23600-PA | 15..235 | 7..219 | 192 | 26.1 | Plus |
Dsec\GM12822-PA | 335 | GM12822-PA | 6..236 | 16..237 | 183 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18220-PA | 336 | GD18220-PA | 1..336 | 1..336 | 1755 | 97.9 | Plus |
Dsim\GD24467-PA | 242 | GD24467-PA | 5..178 | 33..220 | 202 | 31.2 | Plus |
Dsim\GD18413-PA | 321 | GD18413-PA | 15..242 | 7..224 | 193 | 26.6 | Plus |
Dsim\GD23300-PA | 325 | GD23300-PA | 49..310 | 28..302 | 186 | 27 | Plus |
Dsim\GD17678-PA | 326 | GD17678-PA | 15..236 | 5..219 | 172 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10959-PA | 343 | GJ10959-PA | 1..339 | 1..336 | 1533 | 81.1 | Plus |
Dvir\GJ19048-PA | 242 | GJ19048-PA | 10..164 | 38..206 | 197 | 33.7 | Plus |
Dvir\GJ18503-PA | 596 | GJ18503-PA | 11..197 | 35..220 | 186 | 29 | Plus |
Dvir\GJ14365-PA | 352 | GJ14365-PA | 63..252 | 15..208 | 177 | 26.2 | Plus |
Dvir\GJ16192-PA | 327 | GJ16192-PA | 51..312 | 28..302 | 173 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14345-PA | 338 | GK14345-PA | 1..335 | 1..334 | 1504 | 83.3 | Plus |
Dwil\GK20088-PA | 242 | GK20088-PA | 10..178 | 38..220 | 210 | 32.8 | Plus |
Dwil\GK18150-PA | 300 | GK18150-PA | 51..291 | 35..287 | 185 | 27 | Plus |
Dwil\GK11925-PA | 329 | GK11925-PA | 23..213 | 34..219 | 184 | 28.7 | Plus |
Dwil\GK11608-PA | 320 | GK11608-PA | 45..233 | 28..219 | 180 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10721-PA | 336 | GE10721-PA | 1..336 | 1..336 | 1727 | 95.8 | Plus |
Dyak\GE15485-PA | 242 | GE15485-PA | 5..178 | 33..220 | 203 | 31.7 | Plus |
Dyak\GE17252-PA | 641 | GE17252-PA | 55..241 | 35..220 | 186 | 29.7 | Plus |
Dyak\GE18307-PA | 325 | GE18307-PA | 113..310 | 95..302 | 185 | 27.9 | Plus |
Dyak\GE23991-PA | 361 | GE23991-PA | 75..261 | 18..208 | 175 | 24.6 | Plus |