BDGP Sequence Production Resources |
Search the DGRC for LD07988
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 79 |
Well: | 88 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG8578-RA |
Protein status: | LD07988.pep: gold |
Preliminary Size: | 1744 |
Sequenced Size: | 1614 |
Gene | Date | Evidence |
---|---|---|
CG8578 | 2001-11-09 | Blastp of sequenced clone |
CG8578 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8578 | 2008-04-29 | Release 5.5 accounting |
CG8578 | 2008-08-15 | Release 5.9 accounting |
CG8578 | 2008-12-18 | 5.12 accounting |
1614 bp (1614 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069374
> LD07988.complete CTTTCGCTTAAGGTGTCTCTTAAAACTTTTTATGTCGTGCGATCGCTTGC GATTAATATATAAAATATAGTTAAATTGAGCACAGATTCAATGGAAAGTA TCAGCACCACAGGTCGGCGACGGAACAACATGCGAATCAATGCCGAAGAC AATGCGCTGGATCAAATTACGAAAGAGGCGGAAGCGCGACTTGCTGCGCG TCGACAGGCGCGCGCCGAAGCCCGCGAGATTCGCATGAGGGAGCTGGAGC GGCAGCAGAAAGAGCAGGAGATCACCGCCGACCGGGTCTTCGACATGCAA AACTCCACGGCAGTGGGCAGCGAAACTCTGTCGGCGCATCCCGTGCGCCT CGCCTACGGCGGACTGTTAAACGTGACCCGTGCATCAGCATCCCGCCGCA GCAGTGAGGACTCCGTGGAGGAGGAGGGCAGAAGTTTTCGCGACTTCAAG CACGAGCTTAAGGATGTTGAGGAGCGGTTTCGCAAAGCCATGATAACGAA CGCCCAGTTGGACAACGATCGCGCCTCGCAGGCCTACGAAGTCAAGCTAC TGAAGGACAAATGCGAAATAATGGAAGAGTCGTATGCACAACTACAGCGC GAGTTCAAGGAGAAGATGCGTGACTGCAATGCCCTCAAACGCAACCTGGA TCGCGCCAATCTCGAGCTTAAGCTAGTACAAGGGCAGTTAAACGAGCGCG ACTCGTTGATCGCCGAACAGGGCCTTCTAATTGTAGCAGTTGAAAATGCC GATGGCAGCGATGCCAAGCGAGCTCTAGTGAGTGTCGAGAATGCCAAGGT GCTGGCCTCCGTGCAGGGTTCTTTAGACGTTAGACTTAAAAAGTTCAGTG ACGAGAAGCAGCGGCTGCTGGCGGAGGTGCAGAAGCTTCACGAACAACTT GACGAGTATAAAAGTGATGGAATTTCCGGACGCCGCAGTCTTTCGCAAGG TTCCTTCGGCGATGAGAATGATTACGAGGCCCAACGGGAAACAAACAAAA TCATTTCAGACCATAAATATAAGCTGCAAAAGGCGGAACAGGAAATCGCC AACCTACAGTCGAGCCTAGCGCGCTCCGAAACTCAAGTAATCCGATACAA AAGCACCGCAGAAGCTGCCGAAAAGGCGGAGGCTGAGCTGAAGCTGGAGC GCCGCAAGCTGCAACGCGAGCACCGGGAACTCTTGGAGAAGTTGGAGGAA GCTGAAACGTCCAACAACCATTTGTTGAAACGCCTCGATAAGTTGAAAAA CGCAAAGAGTGCCATTCTAAAGGACTTATGATCTAAGATGGGAAATGCAA TCTCGCCAACCATTGAAGGATCGCACCCGATGACATAGGAAACGCAAGTA CACGACATCATCAACACACAAATCAACATGCTGCAATTGAAATAGCACTT CGGTAGCAATTTAATCGGTCTTAGTGGTAGCAAATCGATAATTTTTGAAG GATAATCCAAAATACTCTACCTTAAAAATATATATATATATATATTTAAA TTAAAATATAAACTAACTGGATAATAATTAACATAAATAATGTCTATATG TGTATATTTAAAGCGCAAAATATAAGTAACAATTCAATTGGTTCAAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8578-RA | 1683 | CG8578-RA | 52..1646 | 1..1595 | 7975 | 100 | Plus |
CG8578.e | 1611 | CG8578.e | 87..1611 | 71..1595 | 7625 | 100 | Plus |
CG8578.f | 1554 | CG8578.f | 62..1554 | 103..1595 | 7465 | 100 | Plus |
CG8578.e | 1611 | CG8578.e | 52..86 | 1..35 | 175 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 15737042..15737467 | 1169..1594 | 2130 | 100 | Plus |
chrX | 22417052 | chrX | 15735823..15736188 | 461..826 | 1830 | 100 | Plus |
chrX | 22417052 | chrX | 15735481..15735768 | 176..463 | 1440 | 100 | Plus |
chrX | 22417052 | chrX | 15736798..15736982 | 986..1170 | 910 | 99.5 | Plus |
chrX | 22417052 | chrX | 15736248..15736409 | 825..986 | 795 | 99.4 | Plus |
chrX | 22417052 | chrX | 15735168..15735310 | 36..178 | 715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15847201..15847627 | 1169..1595 | 2135 | 100 | Plus |
X | 23542271 | X | 15845982..15846347 | 461..826 | 1830 | 100 | Plus |
X | 23542271 | X | 15845640..15845927 | 176..463 | 1440 | 100 | Plus |
X | 23542271 | X | 15846957..15847141 | 986..1170 | 925 | 100 | Plus |
X | 23542271 | X | 15846407..15846568 | 825..986 | 810 | 100 | Plus |
X | 23542271 | X | 15845327..15845469 | 36..178 | 715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15855299..15855725 | 1169..1595 | 2135 | 100 | Plus |
X | 23527363 | X | 15854080..15854445 | 461..826 | 1830 | 100 | Plus |
X | 23527363 | X | 15853738..15854025 | 176..463 | 1440 | 100 | Plus |
X | 23527363 | X | 15855055..15855239 | 986..1170 | 925 | 100 | Plus |
X | 23527363 | X | 15854505..15854666 | 825..986 | 810 | 100 | Plus |
X | 23527363 | X | 15853425..15853567 | 36..178 | 715 | 100 | Plus |
X | 23527363 | X | 15852595..15852629 | 1..35 | 175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15734337..15734371 | 1..35 | 100 | -> | Plus |
chrX | 15735168..15735309 | 36..177 | 100 | -> | Plus |
chrX | 15735483..15735767 | 178..462 | 100 | -> | Plus |
chrX | 15735825..15736188 | 463..826 | 100 | -> | Plus |
chrX | 15736250..15736408 | 827..985 | 99 | -> | Plus |
chrX | 15736798..15736982 | 986..1170 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8578-RA | 1..1191 | 91..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8578-RA | 1..1191 | 91..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8578-RA | 1..1191 | 91..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8578-RA | 1..1191 | 91..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8578-RA | 1..1191 | 91..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8578-RA | 1..1594 | 1..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8578-RA | 1..1594 | 1..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8578-RA | 1..1594 | 1..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8578-RA | 1..1594 | 1..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8578-RA | 22..1615 | 1..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15845327..15845468 | 36..177 | 100 | -> | Plus |
X | 15845642..15845926 | 178..462 | 100 | -> | Plus |
X | 15844497..15844531 | 1..35 | 100 | -> | Plus |
X | 15845984..15846347 | 463..826 | 100 | -> | Plus |
X | 15846409..15846567 | 827..985 | 100 | -> | Plus |
X | 15846957..15847141 | 986..1170 | 100 | -> | Plus |
X | 15847203..15847626 | 1171..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15845327..15845468 | 36..177 | 100 | -> | Plus |
X | 15845642..15845926 | 178..462 | 100 | -> | Plus |
X | 15844497..15844531 | 1..35 | 100 | -> | Plus |
X | 15845984..15846347 | 463..826 | 100 | -> | Plus |
X | 15846409..15846567 | 827..985 | 100 | -> | Plus |
X | 15846957..15847141 | 986..1170 | 100 | -> | Plus |
X | 15847203..15847626 | 1171..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15845327..15845468 | 36..177 | 100 | -> | Plus |
X | 15845642..15845926 | 178..462 | 100 | -> | Plus |
X | 15844497..15844531 | 1..35 | 100 | -> | Plus |
X | 15845984..15846347 | 463..826 | 100 | -> | Plus |
X | 15846409..15846567 | 827..985 | 100 | -> | Plus |
X | 15846957..15847141 | 986..1170 | 100 | -> | Plus |
X | 15847203..15847626 | 1171..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15740990..15741174 | 986..1170 | 100 | -> | Plus |
arm_X | 15738530..15738564 | 1..35 | 100 | -> | Plus |
arm_X | 15739360..15739501 | 36..177 | 100 | -> | Plus |
arm_X | 15739675..15739959 | 178..462 | 100 | -> | Plus |
arm_X | 15740017..15740380 | 463..826 | 100 | -> | Plus |
arm_X | 15740442..15740600 | 827..985 | 100 | -> | Plus |
arm_X | 15741236..15741659 | 1171..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15853740..15854024 | 178..462 | 100 | -> | Plus |
X | 15854082..15854445 | 463..826 | 100 | -> | Plus |
X | 15854507..15854665 | 827..985 | 100 | -> | Plus |
X | 15855055..15855239 | 986..1170 | 100 | -> | Plus |
X | 15855301..15855724 | 1171..1594 | 100 | Plus | |
X | 15852595..15852629 | 1..35 | 100 | -> | Plus |
X | 15853425..15853566 | 36..177 | 100 | -> | Plus |
Translation from 90 to 1280
> LD07988.hyp MESISTTGRRRNNMRINAEDNALDQITKEAEARLAARRQARAEAREIRMR ELERQQKEQEITADRVFDMQNSTAVGSETLSAHPVRLAYGGLLNVTRASA SRRSSEDSVEEEGRSFRDFKHELKDVEERFRKAMITNAQLDNDRASQAYE VKLLKDKCEIMEESYAQLQREFKEKMRDCNALKRNLDRANLELKLVQGQL NERDSLIAEQGLLIVAVENADGSDAKRALVSVENAKVLASVQGSLDVRLK KFSDEKQRLLAEVQKLHEQLDEYKSDGISGRRSLSQGSFGDENDYEAQRE TNKIISDHKYKLQKAEQEIANLQSSLARSETQVIRYKSTAEAAEKAEAEL KLERRKLQREHRELLEKLEEAETSNNHLLKRLDKLKNAKSAILKDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8578-PC | 396 | CG8578-PC | 1..396 | 1..396 | 1936 | 100 | Plus |
CG8578-PB | 396 | CG8578-PB | 1..396 | 1..396 | 1936 | 100 | Plus |
CG8578-PA | 396 | CG8578-PA | 1..396 | 1..396 | 1936 | 100 | Plus |
CLIP-190-PN | 1598 | CG5020-PN | 845..1246 | 27..392 | 161 | 22.6 | Plus |
CLIP-190-PR | 1601 | CG5020-PR | 848..1249 | 27..392 | 161 | 22.6 | Plus |
Translation from 90 to 1280
> LD07988.pep MESISTTGRRRNNMRINAEDNALDQITKEAEARLAARRQARAEAREIRMR ELERQQKEQEITADRVFDMQNSTAVGSETLSAHPVRLAYGGLLNVTRASA SRRSSEDSVEEEGRSFRDFKHELKDVEERFRKAMITNAQLDNDRASQAYE VKLLKDKCEIMEESYAQLQREFKEKMRDCNALKRNLDRANLELKLVQGQL NERDSLIAEQGLLIVAVENADGSDAKRALVSVENAKVLASVQGSLDVRLK KFSDEKQRLLAEVQKLHEQLDEYKSDGISGRRSLSQGSFGDENDYEAQRE TNKIISDHKYKLQKAEQEIANLQSSLARSETQVIRYKSTAEAAEKAEAEL KLERRKLQREHRELLEKLEEAETSNNHLLKRLDKLKNAKSAILKDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17405-PA | 391 | GF17405-PA | 1..391 | 4..396 | 1483 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17921-PA | 396 | GG17921-PA | 1..396 | 1..396 | 2015 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12175-PA | 397 | GH12175-PA | 1..397 | 1..396 | 1451 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8578-PC | 396 | CG8578-PC | 1..396 | 1..396 | 1936 | 100 | Plus |
CG8578-PB | 396 | CG8578-PB | 1..396 | 1..396 | 1936 | 100 | Plus |
CG8578-PA | 396 | CG8578-PA | 1..396 | 1..396 | 1936 | 100 | Plus |
CLIP-190-PN | 1598 | CG5020-PN | 845..1246 | 27..392 | 161 | 22.6 | Plus |
CLIP-190-PR | 1601 | CG5020-PR | 848..1249 | 27..392 | 161 | 22.6 | Plus |
CLIP-190-PP | 1623 | CG5020-PP | 870..1271 | 27..392 | 161 | 22.6 | Plus |
CLIP-190-PC | 1652 | CG5020-PC | 899..1300 | 27..392 | 161 | 22.6 | Plus |
CLIP-190-PS | 1653 | CG5020-PS | 900..1301 | 27..392 | 161 | 22.6 | Plus |
CLIP-190-PM | 1668 | CG5020-PM | 915..1316 | 27..392 | 161 | 22.6 | Plus |
CLIP-190-PB | 1689 | CG5020-PB | 936..1337 | 27..392 | 161 | 22.6 | Plus |
CLIP-190-PA | 1690 | CG5020-PA | 937..1338 | 27..392 | 161 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14176-PA | 397 | GI14176-PA | 1..397 | 1..396 | 1391 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11920-PA | 349 | GL11920-PA | 1..349 | 49..396 | 1501 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA29177-PA | 240 | GA29177-PA | 18..225 | 47..253 | 928 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22589-PA | 396 | GM22589-PA | 1..396 | 1..396 | 2022 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24680-PA | 396 | GD24680-PA | 1..396 | 1..396 | 2022 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18437-PA | 396 | GJ18437-PA | 7..396 | 8..396 | 1402 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17757-PA | 468 | GK17757-PA | 118..468 | 47..396 | 1424 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17228-PA | 396 | GE17228-PA | 1..396 | 1..396 | 2016 | 99.5 | Plus |