BDGP Sequence Production Resources |
Search the DGRC for LD07994
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 79 |
Well: | 94 |
Vector: | pBS SK- |
Associated Gene/Transcript | Dmn-RA |
Protein status: | LD07994.pep: gold |
Preliminary Size: | 1488 |
Sequenced Size: | 1359 |
Gene | Date | Evidence |
---|---|---|
CG8269 | 2001-01-01 | Release 2 assignment |
CG8269 | 2001-10-10 | Blastp of sequenced clone |
CG8269 | 2003-01-01 | Sim4 clustering to Release 3 |
Dmn | 2008-04-29 | Release 5.5 accounting |
Dmn | 2008-08-15 | Release 5.9 accounting |
Dmn | 2008-12-18 | 5.12 accounting |
1359 bp (1359 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061092
> LD07994.complete ATCAGATCGAATTGATTGTTGTAAAAAAGGATTTTTGAAGGTTTATAATT ATTTCGTTGCCAAAGGATTCCAAACACCGCCGTCGACGTGCCCACAATAA TGGCCGATCCCAAGTTCCAGAACCTACCGGGAATAGCTTATGACCAGCCG GACGTGTACGAAACTCCAGATGACCCGGAGCTCGATACATCCGACTACTA CGAAGAGGAGCCGGAGAACGAAGCCATCGAGCGACTGCACATCTCGCCGA GCGTCGCTCACAAGCGCTTCAGCGGAGCAACGGTCGAGGGGAGTGTGGAC TTCACGGATCGCATTGGACGACGCATGTGCCGGGGTTACGATACGCGCGG CTCCAGCGACTACGAGCTGGTTGGCCAGGGCGAGAAGGAGACGCCGGTGC AGAAGTGCCAGCGCCTGCAGATCGAGATGAACGAGCTTCTGAACGAGGTG GCCGCCTTGCAGGTGGACCGCAAGGTAGCCGACGAGGAGAAGCAGTCGTA CGATGCGGTGGCCACGGTTATCAGCACGGCCCGAAAGGTGCTGGAGTCGC TGAAGCTGGAGCAAGTGCTGGGCAAGGAGCAGACGCCTGGAAGTAAGCAG GTGAAAGCACTCATTAGCCAGGTGGAGGAGTTCAAGCAGTCCGGCGTTCT CACAGCCATACCCACGCCTGGCACCGATCTGGCGGCCACGGCCCGCGTAG CCAGTCTAGAGCAGCGAATCTCGCAGCTGGAGAAGGTGCTGGGCGCTCAG CCGGACAAGTTGAGCCGCCTTACCGCCGCCACCAACACCACCAATGTACT AGAGGCAGTGCGTCATCTAAGCACCAAGGCGGCCCTGATACAGCCTGATA AACTGGACACCATCGAGCAGCGCCTGACCTCGCTGGCCGGCAAGATGGAT GCTATCGCCGAAAAGTCCAGCGGCAGTGCCCAGGACGCCAAACGAGATCA GAAGATTACGGAACTATACGACATCGCGAAGCGCACGGAGCCAGTGGTGG AAATACTGCCGCACGTCATCGAACGCATGCAAGCCCTCGAGGCCCTCCAT AAATATGCAAACAATTTCGCCAAGATCATCGCAGAGATTGAGCAGAAGCA GGGAACCATCACCACTAGCTTGGTGAACAACAAGGAGCTGCTGCATTCCG TACAGGAGACTTTCGCCCAGAATCTGGAGACTATCAACAGCAAGGTGGCC AAGGTGGAGCAGCGTGTGGCGGCCATATCGTCTGCCAAATGAGTGGATGC ATACCATGCGTATTAAATAAACATAGCTTATATTTATGAAAGATACCTAT AATAAAGAGATCTACATTCGAGTCCAGTTCCAGTCAAAAAAAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmn-RA | 1489 | Dmn-RA | 52..1396 | 1..1345 | 6710 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4779627..4780548 | 136..1057 | 4610 | 100 | Plus |
chr2R | 21145070 | chr2R | 4780614..4780892 | 1057..1335 | 1395 | 100 | Plus |
chr2R | 21145070 | chr2R | 4779408..4779543 | 1..136 | 680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8893273..8894194 | 136..1057 | 4610 | 100 | Plus |
2R | 25260384 | 2R | 8894260..8894548 | 1057..1345 | 1430 | 99.6 | Plus |
2R | 25260384 | 2R | 8893054..8893189 | 1..136 | 680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
roo | 9092 | roo DM_ROO 9092bp | 8159..8217 | 1262..1318 | 111 | 70.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4780615..4780892 | 1058..1335 | 100 | Plus | |
chr2R | 4779408..4779542 | 1..135 | 100 | -> | Plus |
chr2R | 4779627..4780548 | 136..1057 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dmn-RA | 1..1143 | 100..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dmn-RA | 1..1143 | 100..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dmn-RA | 1..1143 | 100..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dmn-RA | 1..1143 | 100..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dmn-RA | 1..1143 | 100..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dmn-RA | 16..1350 | 1..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dmn-RA | 16..1350 | 1..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dmn-RA | 24..1358 | 1..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dmn-RA | 16..1350 | 1..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dmn-RA | 24..1358 | 1..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8891855..8891989 | 1..135 | 100 | -> | Plus |
2R | 8892074..8892995 | 136..1057 | 100 | -> | Plus |
2R | 8893062..8893339 | 1058..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8891855..8891989 | 1..135 | 100 | -> | Plus |
2R | 8892074..8892995 | 136..1057 | 100 | -> | Plus |
2R | 8893062..8893339 | 1058..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8891855..8891989 | 1..135 | 100 | -> | Plus |
2R | 8892074..8892995 | 136..1057 | 100 | -> | Plus |
2R | 8893062..8893339 | 1058..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4779360..4779494 | 1..135 | 100 | -> | Plus |
arm_2R | 4779579..4780500 | 136..1057 | 100 | -> | Plus |
arm_2R | 4780567..4780844 | 1058..1335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8893273..8894194 | 136..1057 | 100 | -> | Plus |
2R | 8894261..8894538 | 1058..1335 | 100 | Plus | |
2R | 8893054..8893188 | 1..135 | 100 | -> | Plus |
Translation from 99 to 1241
> LD07994.pep MADPKFQNLPGIAYDQPDVYETPDDPELDTSDYYEEEPENEAIERLHISP SVAHKRFSGATVEGSVDFTDRIGRRMCRGYDTRGSSDYELVGQGEKETPV QKCQRLQIEMNELLNEVAALQVDRKVADEEKQSYDAVATVISTARKVLES LKLEQVLGKEQTPGSKQVKALISQVEEFKQSGVLTAIPTPGTDLAATARV ASLEQRISQLEKVLGAQPDKLSRLTAATNTTNVLEAVRHLSTKAALIQPD KLDTIEQRLTSLAGKMDAIAEKSSGSAQDAKRDQKITELYDIAKRTEPVV EILPHVIERMQALEALHKYANNFAKIIAEIEQKQGTITTSLVNNKELLHS VQETFAQNLETINSKVAKVEQRVAAISSAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12385-PA | 380 | GF12385-PA | 1..380 | 1..380 | 1842 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23390-PA | 380 | GG23390-PA | 1..380 | 1..380 | 1962 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23102-PA | 379 | GH23102-PA | 1..379 | 1..380 | 1745 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
DCTN2-p50-PA | 380 | CG8269-PA | 1..380 | 1..380 | 1881 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18927-PA | 379 | GI18927-PA | 1..379 | 1..380 | 1731 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17128-PA | 380 | GL17128-PA | 1..380 | 1..380 | 1772 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20943-PA | 380 | GA20943-PA | 1..380 | 1..380 | 1769 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21071-PA | 380 | GM21071-PA | 1..380 | 1..380 | 1979 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10607-PA | 380 | GD10607-PA | 1..380 | 1..380 | 1984 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21298-PA | 379 | GJ21298-PA | 1..379 | 1..380 | 1745 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20679-PA | 381 | GK20679-PA | 1..381 | 1..380 | 1774 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19232-PA | 380 | GE19232-PA | 1..380 | 1..380 | 1959 | 97.6 | Plus |
Translation from 99 to 1241
> LD07994.hyp MADPKFQNLPGIAYDQPDVYETPDDPELDTSDYYEEEPENEAIERLHISP SVAHKRFSGATVEGSVDFTDRIGRRMCRGYDTRGSSDYELVGQGEKETPV QKCQRLQIEMNELLNEVAALQVDRKVADEEKQSYDAVATVISTARKVLES LKLEQVLGKEQTPGSKQVKALISQVEEFKQSGVLTAIPTPGTDLAATARV ASLEQRISQLEKVLGAQPDKLSRLTAATNTTNVLEAVRHLSTKAALIQPD KLDTIEQRLTSLAGKMDAIAEKSSGSAQDAKRDQKITELYDIAKRTEPVV EILPHVIERMQALEALHKYANNFAKIIAEIEQKQGTITTSLVNNKELLHS VQETFAQNLETINSKVAKVEQRVAAISSAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmn-PA | 380 | CG8269-PA | 1..380 | 1..380 | 1881 | 100 | Plus |