BDGP Sequence Production Resources |
Search the DGRC for LD08056
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 80 |
Well: | 56 |
Vector: | pBS SK- |
Associated Gene/Transcript | sip2-RB |
Protein status: | LD08056.pep: gold |
Sequenced Size: | 2178 |
Gene | Date | Evidence |
---|---|---|
sip2 | 2008-04-29 | Release 5.5 accounting |
sip2 | 2008-04-29 | Picked prior to 5.5 |
sip2 | 2008-08-15 | Release 5.9 accounting |
sip2 | 2008-12-18 | 5.12 accounting |
2178 bp assembled on 2007-11-15
GenBank Submission: BT031251
> LD08056.complete AAGAAATCCATGAAATATTTGCGTGTGCGCCTTGAAGATTAAGGAAGATC TGCGTGAATACTATTGCCAGAAGTTTTGCACCCAGGACACACGCACACTC GCACACTCACGATGTCTGGCCTCAAGAAATTCCAAAACACTGAGGAATGG CGTCAGAAACTCCGTCAGTTTCTAATGACCGAGCGCTTGCCGAAAAAGCC CGTGAAAATGGACGAAACGAAGGATATGCGCTATAGTTTGGAGATCGACG AGGATTTGAGGAGACCCTTGGAGGCGCGGGCCAAGAAAGTTCTGGCCGTT AATTCTGCCAGTCAAAGGACTGTTAATCTCGGCGAGGATACTATGTACGA GGCAGGTGACTTGGAGCACTTGGACGATGGCGATGATAGCTTCAGTGCCT TTGAGCGCATGTGCGACAAAACCGGTTCCGATCCGGATAGCACTCTTTTC CAGTACCTGCACAGCGAGGACCGGAGTCAGGTGATGGCCAGGGCTAGGGA TCATAGCACCGACGATCAGAAAGAGATCGATGCACTGCGTCGCATGCTAG AGGCAGTGGGTACAGAAGACGATCTATTGGAGAACGAAAGTCCCGTCAAG GGGGCGGAGTGCACTCACCTGGAGGACATTGAGGCGCCGTCGCGCTTTTG GGACAACACCCTGGCCGGAATGGACGAGACCTCATCCGACTCTGGGCTGA CTCCTAAAGCATTGACCAAGGTTTCGCCTGTCAAAATGGTGGGGCTGCTT CGCCCCTCAACCATCATCGAAGACAGCGAACTGGAGTCGTCTGATGTGTC TTCACACACAAGCTTCCAAAGCGCTCGCACCCTAAAGACAAATGCATCTA GTTCTTACGAAACAGCCACGGATACTTCCCTCAGTGGAACGCTCCTAAAC GTCGACGAATTGTTTTACGCCGCAATTGCCAAGGCCAAGCCACCAGGAAT GTCCAAGGGAGAGGAGCTGGAGCTCTTAAGCGATCTTCATGGCAGTCTTA GAGAGCTGGCCTCACTTCCGAAGGATGAGGTCGAGGAGGAAGAGGACGAT ATAGAGGATACAATAATCGAGCTATCCTCTTCTGACGATGAAGAAGTGCA GCTAGTTCCAGAAGTAAAACAAGAAGACACGTCCCGTGTGTCCTCAGTCC ACGGAAAAGATCACACTGAGCAGAAACCAGCGGAGAAGAGCGTTGAAAAT AAGGAAAATTCGTTGCATTTCAATGATACCATGGAAGAAATGGAGTACAT GATGCAAAAGGGTATGGAGTACATGGCAGGTGGGGCTCCTTCAGTCGCCG CAGTCAAGGCAGATTGCCCTGTGCTGCCCAAGACCAAACAAAGCACGTTC GTTGTTTCACCGAAGCCGGAACCAAAATCACCGGCTGTAGCCTTTTTGCA GCCATCAATTCCGCTGCGGTCATCTAATCAGCCACAAACAGTTGTAGGTT CATCTAGCACGGGTAGAAAGCCGCTCAATGTCGGCCTCACCATGGAGTGG ACCAAAAAGAAATTTTTCAGTGCAGCCTCTGGTATTCCTCAGCGTCGCCA AAATCAGATAAAGCAGCCATACGCCAACATAGTCAGTCCCATACGCACCT ACACCCAGAAGTCTGGTACTGCTCCGCTAATGAGTACATTCCGTCCAACG AGTTCTGATATGCTATCTACACTGGCCATCAGTGAGTTGGAGCAGGAGTC TCGCTTGTGTCATCCTAAAGCACTTTTCGCAACAAAGGACGAAACACCCA AGTCCAGTGAAGCGGAATCTTTAATTATCAATGGAATCGATTCAGCCGCT GATCTGCTTCCCAAAAAGGCTTACATATCTTCCGAAATCAAGCATGTGGT TGATGAACGAACTCCTTTGCCCATGCCGAAGGTACCTCAAATTCAAAAAT ACCTCAACTCCGCCGTGGAGCCTACTGTTATGCGCCACGATGGCAAAATG AAAATGCCCGGCGAGGCAGTCCGCAATCCGTCGTCTTCGCATATCCCACG ACGCGCCAATCACAGCCTGGCTGATCTGTCGCTCGCCTCAGGCGACGTGT CCTTATACACAATAAGAGATGCCCAAAAGTTTTAAGGCCCATAAAAGTAC TTCACGCTCCTTGACTAAATATTGCAACGATAATAAATGTATTGTGTAAC TAGTGCTAGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sip2_CG9188-RB | 2303 | sip2_CG9188-RB | 142..2303 | 1..2162 | 10810 | 100 | Plus |
sip2_CG9188-RA | 2288 | sip2_CG9188-RA | 268..2246 | 185..2163 | 9895 | 100 | Plus |
sip2_CG9188.a | 2124 | sip2_CG9188.a | 149..2124 | 185..2160 | 9880 | 100 | Plus |
sip2_CG9188.a | 2124 | sip2_CG9188.a | 63..139 | 1..77 | 385 | 100 | Plus |
sip2_CG9188-RA | 2288 | sip2_CG9188-RA | 196..268 | 1..73 | 365 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6960977..6962639 | 1847..185 | 8300 | 99.9 | Minus |
chr2L | 23010047 | chr2L | 6960600..6960914 | 2160..1846 | 1575 | 100 | Minus |
chr2L | 23010047 | chr2L | 6962828..6962941 | 185..72 | 570 | 100 | Minus |
chr2L | 23010047 | chr2L | 6963023..6963095 | 73..1 | 365 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6961893..6963555 | 1847..185 | 8315 | 100 | Minus |
2L | 23513712 | 2L | 6961513..6961830 | 2163..1846 | 1590 | 100 | Minus |
2L | 23513712 | 2L | 6963744..6963857 | 185..72 | 570 | 100 | Minus |
2L | 23513712 | 2L | 6963939..6964011 | 73..1 | 365 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6961893..6963555 | 1847..185 | 8315 | 100 | Minus |
2L | 23513712 | 2L | 6961513..6961830 | 2163..1846 | 1590 | 100 | Minus |
2L | 23513712 | 2L | 6963744..6963857 | 185..72 | 570 | 100 | Minus |
2L | 23513712 | 2L | 6963939..6964011 | 73..1 | 365 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6960600..6960914 | 1846..2160 | 100 | <- | Minus |
chr2L | 6960979..6962638 | 186..1845 | 99 | <- | Minus |
chr2L | 6962828..6962939 | 74..185 | 100 | <- | Minus |
chr2L | 6963023..6963095 | 1..73 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip2-RB | 1..1974 | 112..2085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip2-RB | 1..1974 | 112..2085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip2-RB | 1..1974 | 112..2085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip2-RB | 1..1974 | 112..2085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip2-RB | 1..1974 | 112..2085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip2-RB | 63..2222 | 1..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip2-RB | 63..2222 | 1..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip2-RB | 64..2223 | 1..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip2-RB | 63..2222 | 1..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip2-RB | 64..2223 | 1..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6961516..6961830 | 1846..2160 | 100 | <- | Minus |
2L | 6961895..6963554 | 186..1845 | 100 | <- | Minus |
2L | 6963744..6963855 | 74..185 | 100 | <- | Minus |
2L | 6963939..6964011 | 1..73 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6961516..6961830 | 1846..2160 | 100 | <- | Minus |
2L | 6961895..6963554 | 186..1845 | 100 | <- | Minus |
2L | 6963744..6963855 | 74..185 | 100 | <- | Minus |
2L | 6963939..6964011 | 1..73 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6961516..6961830 | 1846..2160 | 100 | <- | Minus |
2L | 6961895..6963554 | 186..1845 | 100 | <- | Minus |
2L | 6963744..6963855 | 74..185 | 100 | <- | Minus |
2L | 6963939..6964011 | 1..73 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6961516..6961830 | 1846..2160 | 100 | <- | Minus |
arm_2L | 6961895..6963554 | 186..1845 | 100 | <- | Minus |
arm_2L | 6963744..6963855 | 74..185 | 100 | <- | Minus |
arm_2L | 6963939..6964011 | 1..73 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6961516..6961830 | 1846..2160 | 100 | <- | Minus |
2L | 6961895..6963554 | 186..1845 | 100 | <- | Minus |
2L | 6963744..6963855 | 74..185 | 100 | <- | Minus |
2L | 6963939..6964011 | 1..73 | 100 | Minus |
Translation from 111 to 2084
> LD08056.pep MSGLKKFQNTEEWRQKLRQFLMTERLPKKPVKMDETKDMRYSLEIDEDLR RPLEARAKKVLAVNSASQRTVNLGEDTMYEAGDLEHLDDGDDSFSAFERM CDKTGSDPDSTLFQYLHSEDRSQVMARARDHSTDDQKEIDALRRMLEAVG TEDDLLENESPVKGAECTHLEDIEAPSRFWDNTLAGMDETSSDSGLTPKA LTKVSPVKMVGLLRPSTIIEDSELESSDVSSHTSFQSARTLKTNASSSYE TATDTSLSGTLLNVDELFYAAIAKAKPPGMSKGEELELLSDLHGSLRELA SLPKDEVEEEEDDIEDTIIELSSSDDEEVQLVPEVKQEDTSRVSSVHGKD HTEQKPAEKSVENKENSLHFNDTMEEMEYMMQKGMEYMAGGAPSVAAVKA DCPVLPKTKQSTFVVSPKPEPKSPAVAFLQPSIPLRSSNQPQTVVGSSST GRKPLNVGLTMEWTKKKFFSAASGIPQRRQNQIKQPYANIVSPIRTYTQK SGTAPLMSTFRPTSSDMLSTLAISELEQESRLCHPKALFATKDETPKSSE AESLIINGIDSAADLLPKKAYISSEIKHVVDERTPLPMPKVPQIQKYLNS AVEPTVMRHDGKMKMPGEAVRNPSSSHIPRRANHSLADLSLASGDVSLYT IRDAQKF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14462-PA | 669 | GF14462-PA | 1..669 | 1..657 | 2210 | 67.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23562-PA | 655 | GG23562-PA | 1..655 | 1..657 | 2985 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13579-PA | 688 | GH13579-PA | 1..688 | 1..657 | 1183 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sip2-PB | 657 | CG9188-PB | 1..657 | 1..657 | 3335 | 100 | Plus |
sip2-PC | 640 | CG9188-PC | 4..640 | 21..657 | 3210 | 99.4 | Plus |
sip2-PE | 625 | CG9188-PE | 1..625 | 33..657 | 3167 | 100 | Plus |
sip2-PD | 625 | CG9188-PD | 1..625 | 33..657 | 3167 | 100 | Plus |
sip2-PA | 625 | CG9188-PA | 1..625 | 33..657 | 3167 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24183-PA | 648 | GI24183-PA | 1..648 | 1..657 | 1067 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25594-PA | 641 | GL25594-PA | 1..638 | 1..657 | 1771 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21599-PA | 641 | GA21599-PA | 1..638 | 1..657 | 1769 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13688-PA | 638 | GM13688-PA | 4..638 | 21..657 | 3095 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21452-PA | 666 | GJ21452-PA | 1..666 | 1..657 | 1345 | 47.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18101-PA | 669 | GK18101-PA | 1..669 | 1..657 | 1108 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\sip2-PA | 655 | GE18386-PA | 1..655 | 1..657 | 2922 | 86.3 | Plus |
Translation from 111 to 2084
> LD08056.hyp MSGLKKFQNTEEWRQKLRQFLMTERLPKKPVKMDETKDMRYSLEIDEDLR RPLEARAKKVLAVNSASQRTVNLGEDTMYEAGDLEHLDDGDDSFSAFERM CDKTGSDPDSTLFQYLHSEDRSQVMARARDHSTDDQKEIDALRRMLEAVG TEDDLLENESPVKGAECTHLEDIEAPSRFWDNTLAGMDETSSDSGLTPKA LTKVSPVKMVGLLRPSTIIEDSELESSDVSSHTSFQSARTLKTNASSSYE TATDTSLSGTLLNVDELFYAAIAKAKPPGMSKGEELELLSDLHGSLRELA SLPKDEVEEEEDDIEDTIIELSSSDDEEVQLVPEVKQEDTSRVSSVHGKD HTEQKPAEKSVENKENSLHFNDTMEEMEYMMQKGMEYMAGGAPSVAAVKA DCPVLPKTKQSTFVVSPKPEPKSPAVAFLQPSIPLRSSNQPQTVVGSSST GRKPLNVGLTMEWTKKKFFSAASGIPQRRQNQIKQPYANIVSPIRTYTQK SGTAPLMSTFRPTSSDMLSTLAISELEQESRLCHPKALFATKDETPKSSE AESLIINGIDSAADLLPKKAYISSEIKHVVDERTPLPMPKVPQIQKYLNS AVEPTVMRHDGKMKMPGEAVRNPSSSHIPRRANHSLADLSLASGDVSLYT IRDAQKF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sip2-PB | 657 | CG9188-PB | 1..657 | 1..657 | 3335 | 100 | Plus |
sip2-PC | 640 | CG9188-PC | 4..640 | 21..657 | 3210 | 99.4 | Plus |
sip2-PE | 625 | CG9188-PE | 1..625 | 33..657 | 3167 | 100 | Plus |
sip2-PD | 625 | CG9188-PD | 1..625 | 33..657 | 3167 | 100 | Plus |
sip2-PA | 625 | CG9188-PA | 1..625 | 33..657 | 3167 | 100 | Plus |