BDGP Sequence Production Resources |
Search the DGRC for LD08195
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 81 |
Well: | 95 |
Vector: | pBS SK- |
Associated Gene/Transcript | Unc-76-RA |
Protein status: | LD08195.pep: gold |
Preliminary Size: | 2908 |
Sequenced Size: | 2963 |
Gene | Date | Evidence |
---|---|---|
CG3981 | 2001-11-09 | Blastp of sequenced clone |
CG3981 | 2003-01-01 | Sim4 clustering to Release 3 |
Unc-76 | 2008-04-29 | Release 5.5 accounting |
Unc-76 | 2008-08-15 | Release 5.9 accounting |
Unc-76 | 2008-12-18 | 5.12 accounting |
2963 bp (2963 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069376
> LD08195.complete CGGTTCGCTGGCTGGTCGCAGAAACGCAAATTGTAGAAAGAAAACATTAT AATCAGCCGCGTCTAAGTGCAAGTGTGATTTATTTCTTTTTTGTTTGGTG TTTAGTGTGCTCGTGAGCAGATCAGTGGATCAAACAAACAGCCAGAAAAT CGAGCGCTGGGCAAGCGGAATAAATCCAATTGGAATTGTCCGAACCGCAG TTTTACGGAGTCGAGTGTTCCGTGTTTCGTATTCCGGGGCATTTTCCCCG CCGAAAGCCCCGCTCAACCCCCCAAGCAAACAGCCGAATTAGGGGTTGCA AAGTTTTTGCAGCCAGCCCGGAAAAGTCAGAGGAACTTGTTTTCTAAGGG AAGAAAAGGGAAGCACGCAAGCGACGACTGCCCCCAAAGACCAAACGGAA TCGGAGTCTGAATCGGAATCGGAAGGGGACTCCGCCGAATCCTTGAGAGA ATCTTTTGCGCGTGCCATGCGTGACCTCGGCACCAAAATGGCCGAGCTAA AATTCGAGGCTCCATTGGCAAAGTTCGAGGAAACGGACGAGTGGGGCGGC TGCGACTTCATCTCGAGTCAGAATGCCATAAACGACACGCTCAACCTGAA TCTGAAGGACTCCTCCGCCGGCGGCAAGCCGGATGCCACCAAGCTGCGGC TCCTAGAGGATGCTGTACGCGATGCGCACGTGAGCAAGAACGGAGGAGGA GTAGTGGGAGGAGGAGCTGGCTCCATTAGCCCCAATTGCAACACGCTCCA GGGTGGGTCGCTTATTGAAATCGGCCTGTCCGATGTGGGATTGGTGCCGG GCGAGGGAGCCGGCGTTGGTCTGGACGGTCTGGAGAAGCGCTCCCTGGCC GTCGGCGACCATGTGGACAACTTCACGGAGACCTTCGGCGGAAGTCTGGA GGATCTGGTCAATACGTTCGACGAAAAGATAACCAAGTGTTTCGGCAACT ACGAAGAGAACGTCGAGGAGCTGGCTCCGGTGCAGGTGCGCAGCCAGGAG GAGATCATGAACGAATGCCAAATGTGGTGGACCATCACAGGAAACTTTGG CAACATTCTGCCCATCGACTGGTCCAAGTCGTACACCCGTCAGATGCACA TGCCCACACTGAATCTGGGCCAGAACCACACGAAGCAGCAGCAGCAGAAT CGCAACCAGCAGCAGCAGTTGCACAACCAGAGCCATCAGGCGTATCCACA CACCAACGGTTTGGGATCCGGATCCGGATCCGGCCTGGATGCCCAGACTC CGGGCGATGAGTTCAACGATCTGACCAGTGAGGACGAGGCGGTGGCCAAC GATTTGGACATGCACGCCCTCATCCTTAACGGCTTGAACGGTGACATGGA CGACCAGCCGATTAAGACGGTAGAGGAGGTGATCAAGGAGATCGACGACA TCATGGACGAGGCCGAGAGCCCGCTGGACGAGCCGGAGACCTGCGATTCG GAGGTGATCGAGAAGGCGCGAGAGGTGCTGGGCGCCCCCCTCTATGCGGA AAAACTGCAATATCTGACCACGACACAGCTGAACGAGCTGTACATGGAGA TGGAGGTGCTGATCCAGGAGCTGAGCGAGACGTTGATCAACGAGCTGGCC CTGCGCGACGAGCTGGAGTTCGAGAAGGAGCTGAAGAACTCGTTCATCTC TCTGCTCCTCGCCGTTCAGAACAAAAGGCGGCAGTACCATGTGGAGAAGA AGCGCGGCAAGTTCCAGGGTCCCGAGCCCAAGTACTTGACCACAGTCATT CCGTATCACCTGGAGAACGGCACGCCCAACAATCAGTCTCTGCAGGTCCT GATCAAGATTCTCAAGGCCATCAACGAGGACAGCCCGACGGTTCCGGCCC TCCTTACGGACTACATCCTGAAGGTGCTCTGCCCTACATAAGCGCCGCAA GCGGTAGTCGCCGAGGAGCAGGAACCCCAGCTGTCGCTCCATCTCTCTGT CTGTGTTTATACAATTATACAACTTGCATATACACACCGAACACACCACA CATAATTTAATGATTAGTTCGTACTTTAAATTATTGTTTAAATGCAATCC GTGTACTCTCCGCGGAGAAGAAGATTTGCCGCATAAAGAGAGGACTCTAG TGATTCGTCTGTCGAATATGAGGCACCCAAAGTGGGGTCTTCTTCTCAAC GGAGTGCTTTTCCCGGCCGATTCGACCGACAGAACAAAATATGCAACAAA ACATACATGCAATACACATACATATATAGACACATATATATATATATAAA CCGAAAAATTTACCGAGAGCGCGCTCTACGAACTCAGCCAGTCCTCCCAT GGCAATAATACTCAATTCTCTCCGCCGCCTCTCTTTCTCTTTAAGGAGCA TTCGTATTGTTAAAGAGCCGACTCCAACTAAGCTTAAAATACATACATAC ATATATGGTAAATGCATGTGGGCCAGTTGCAAGTCCGCCTGCCGGTGCAG CTTCAATTTTTTCGTCTATATGTGAAATATGCAGATCTAAATCGATACAC GCTTGCATTATGTTCGCCCAGCTATCTGCGATCGAACGGACAGCCAATCA CTAGGTTTTACAATAAGGATCTTATCTTGTATGTAATATATAATCTGATT ATAAGAGGTGTGTGGCCTGCAGTCCCTGGAAAATCCGCCGTTTCGAAATG TGTTCCGAGTGCAATTTACAAAAATATGATTTGAGATGGCATCAGAATCA GACTCAGAATCGGAAAATCAGAATTAGTTGCAGCAATTGTTTTCGCATCG CTTTAAGTTTACGACGCCTAATTTACTCATTTTTTTATTGTTTACGAGGC CATAAAACGCGTTCTATTTTGTTCAAAACAATTGTTTAATGTAAATGGAG GAAACACAAATTTAATTTTAATTTGCATAGAAAACGCTGTGTTATTTACT TTTACCAAACAAGCATAAATAAAACGCTAATGATAATGCTAAAAAAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1985899..1987030 | 1809..2940 | 5630 | 99.8 | Plus |
chrX | 22417052 | chrX | 1974554..1975573 | 1..1020 | 5100 | 100 | Plus |
chrX | 22417052 | chrX | 1984906..1985387 | 1021..1502 | 2395 | 99.8 | Plus |
chrX | 22417052 | chrX | 1985455..1985672 | 1503..1720 | 1075 | 99.5 | Plus |
chrX | 22417052 | chrX | 1985738..1985828 | 1718..1808 | 455 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 2091962..2093095 | 1809..2942 | 5670 | 100 | Plus |
X | 23542271 | X | 2080640..2081659 | 1..1020 | 5100 | 100 | Plus |
X | 23542271 | X | 2090969..2091450 | 1021..1502 | 2410 | 100 | Plus |
X | 23542271 | X | 2091518..2091735 | 1503..1720 | 1090 | 100 | Plus |
X | 23542271 | X | 2091801..2091891 | 1718..1808 | 455 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 2100060..2101193 | 1809..2942 | 5670 | 100 | Plus |
X | 23527363 | X | 2088738..2089757 | 1..1020 | 5100 | 100 | Plus |
X | 23527363 | X | 2099067..2099548 | 1021..1502 | 2410 | 100 | Plus |
X | 23527363 | X | 2099616..2099833 | 1503..1720 | 1090 | 100 | Plus |
X | 23527363 | X | 2099899..2099989 | 1718..1808 | 455 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 4389..4496 | 2386..2492 | 123 | 58.3 | Plus |
Dbuz\BuT2 | 2775 | Dbuz\BuT2 BUT2 2775bp | 2142..2246 | 2805..2911 | 116 | 59.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1974554..1975573 | 1..1020 | 100 | -> | Plus |
chrX | 1984906..1985387 | 1021..1502 | 99 | -> | Plus |
chrX | 1985455..1985670 | 1503..1718 | 99 | -> | Plus |
chrX | 1985739..1985828 | 1719..1808 | 100 | -> | Plus |
chrX | 1985899..1987030 | 1809..2940 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Unc-76-RA | 1..1425 | 467..1891 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Unc-76-RA | 1..1425 | 467..1891 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Unc-76-RB | 1..1425 | 467..1891 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Unc-76-RA | 1..1425 | 467..1891 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Unc-76-RB | 1..1425 | 467..1891 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Unc-76-RB | 29..2968 | 1..2940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Unc-76-RB | 29..2968 | 1..2940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Unc-76-RB | 31..2970 | 1..2940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Unc-76-RB | 29..2968 | 1..2940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Unc-76-RB | 31..2970 | 1..2940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2080640..2081659 | 1..1020 | 100 | -> | Plus |
X | 2090969..2091450 | 1021..1502 | 100 | -> | Plus |
X | 2091518..2091733 | 1503..1718 | 100 | -> | Plus |
X | 2091802..2091891 | 1719..1808 | 100 | -> | Plus |
X | 2091962..2093093 | 1809..2940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2080640..2081659 | 1..1020 | 100 | -> | Plus |
X | 2090969..2091450 | 1021..1502 | 100 | -> | Plus |
X | 2091518..2091733 | 1503..1718 | 100 | -> | Plus |
X | 2091802..2091891 | 1719..1808 | 100 | -> | Plus |
X | 2091962..2093093 | 1809..2940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2080640..2081659 | 1..1020 | 100 | -> | Plus |
X | 2090969..2091450 | 1021..1502 | 100 | -> | Plus |
X | 2091518..2091733 | 1503..1718 | 100 | -> | Plus |
X | 2091802..2091891 | 1719..1808 | 100 | -> | Plus |
X | 2091962..2093093 | 1809..2940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1974673..1975692 | 1..1020 | 100 | -> | Plus |
arm_X | 1985002..1985483 | 1021..1502 | 100 | -> | Plus |
arm_X | 1985551..1985766 | 1503..1718 | 100 | -> | Plus |
arm_X | 1985835..1985924 | 1719..1808 | 100 | -> | Plus |
arm_X | 1985995..1987126 | 1809..2940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2088738..2089757 | 1..1020 | 100 | -> | Plus |
X | 2099067..2099548 | 1021..1502 | 100 | -> | Plus |
X | 2099616..2099831 | 1503..1718 | 100 | -> | Plus |
X | 2099900..2099989 | 1719..1808 | 100 | -> | Plus |
X | 2100060..2101191 | 1809..2940 | 100 | Plus |
Translation from 466 to 1890
> LD08195.pep MRDLGTKMAELKFEAPLAKFEETDEWGGCDFISSQNAINDTLNLNLKDSS AGGKPDATKLRLLEDAVRDAHVSKNGGGVVGGGAGSISPNCNTLQGGSLI EIGLSDVGLVPGEGAGVGLDGLEKRSLAVGDHVDNFTETFGGSLEDLVNT FDEKITKCFGNYEENVEELAPVQVRSQEEIMNECQMWWTITGNFGNILPI DWSKSYTRQMHMPTLNLGQNHTKQQQQNRNQQQQLHNQSHQAYPHTNGLG SGSGSGLDAQTPGDEFNDLTSEDEAVANDLDMHALILNGLNGDMDDQPIK TVEEVIKEIDDIMDEAESPLDEPETCDSEVIEKAREVLGAPLYAEKLQYL TTTQLNELYMEMEVLIQELSETLINELALRDELEFEKELKNSFISLLLAV QNKRRQYHVEKKRGKFQGPEPKYLTTVIPYHLENGTPNNQSLQVLIKILK AINEDSPTVPALLTDYILKVLCPT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21457-PA | 473 | GF21457-PA | 1..473 | 1..474 | 1983 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12905-PA | 473 | GG12905-PA | 1..473 | 1..474 | 2460 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24577-PA | 459 | GH24577-PA | 1..459 | 8..474 | 1748 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Unc-76-PC | 474 | CG3981-PC | 1..474 | 1..474 | 2468 | 100 | Plus |
Unc-76-PA | 474 | CG3981-PA | 1..474 | 1..474 | 2468 | 100 | Plus |
Unc-76-PB | 474 | CG3981-PB | 1..474 | 1..474 | 2468 | 100 | Plus |
Unc-76-PD | 289 | CG3981-PD | 1..289 | 186..474 | 1508 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15282-PA | 463 | GI15282-PA | 1..463 | 1..474 | 1848 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18226-PA | 431 | GL18226-PA | 1..406 | 1..435 | 1360 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17820-PA | 447 | GA17820-PA | 1..447 | 8..474 | 2022 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19195-PA | 465 | GM19195-PA | 1..465 | 8..474 | 2438 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16583-PA | 691 | GD16583-PA | 561..691 | 186..316 | 495 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16936-PA | 453 | GJ16936-PA | 1..453 | 8..474 | 1839 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25735-PA | 465 | GK25735-PA | 1..465 | 1..474 | 1934 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16233-PA | 472 | GE16233-PA | 1..472 | 1..474 | 2439 | 97.1 | Plus |
Translation from 466 to 1890
> LD08195.hyp MRDLGTKMAELKFEAPLAKFEETDEWGGCDFISSQNAINDTLNLNLKDSS AGGKPDATKLRLLEDAVRDAHVSKNGGGVVGGGAGSISPNCNTLQGGSLI EIGLSDVGLVPGEGAGVGLDGLEKRSLAVGDHVDNFTETFGGSLEDLVNT FDEKITKCFGNYEENVEELAPVQVRSQEEIMNECQMWWTITGNFGNILPI DWSKSYTRQMHMPTLNLGQNHTKQQQQNRNQQQQLHNQSHQAYPHTNGLG SGSGSGLDAQTPGDEFNDLTSEDEAVANDLDMHALILNGLNGDMDDQPIK TVEEVIKEIDDIMDEAESPLDEPETCDSEVIEKAREVLGAPLYAEKLQYL TTTQLNELYMEMEVLIQELSETLINELALRDELEFEKELKNSFISLLLAV QNKRRQYHVEKKRGKFQGPEPKYLTTVIPYHLENGTPNNQSLQVLIKILK AINEDSPTVPALLTDYILKVLCPT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Unc-76-PC | 474 | CG3981-PC | 1..474 | 1..474 | 2468 | 100 | Plus |
Unc-76-PA | 474 | CG3981-PA | 1..474 | 1..474 | 2468 | 100 | Plus |
Unc-76-PB | 474 | CG3981-PB | 1..474 | 1..474 | 2468 | 100 | Plus |
Unc-76-PD | 289 | CG3981-PD | 1..289 | 186..474 | 1508 | 100 | Plus |