BDGP Sequence Production Resources |
Search the DGRC for LD08295
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 82 |
Well: | 95 |
Vector: | pBS SK- |
Associated Gene/Transcript | heix-RA |
Protein status: | LD08295.pep: gold |
Preliminary Size: | 2862 |
Sequenced Size: | 3165 |
Gene | Date | Evidence |
---|---|---|
CG5876 | 2001-01-01 | Release 2 assignment |
CG5876 | 2001-10-10 | Blastp of sequenced clone |
CG5876 | 2003-01-01 | Sim4 clustering to Release 3 |
heix | 2008-04-29 | Release 5.5 accounting |
heix | 2008-08-15 | Release 5.9 accounting |
heix | 2008-12-18 | 5.12 accounting |
3165 bp (3165 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061093
> LD08295.complete CCACCTTCAACGAAAAAGTGTAACCTTTTTTCGTTTTTGCGCTGACGTGA CGTGACAGTTGATTTGTTTGATTAAAATAACTAAGAGTAAAATCGCAGCC AAATCGATTTGCGCCACTAACCCGGAATCGATAGCCGGAAGCAAAGACGC AGCCGGAAAAGGAGAGGCATATAAGAAGAACGATCCTCGCACCGGTCGAG GAAAAGAGAGAGAGAGAGAGGGGCAGCGAGAGAGAGAGAGCGTGAGAAAC TGGGAGCTGCACGGGTGAAATTTCGTGGTTTCGGGACCCCGACCACCTGA GCTCTCCACCCCCCGCTGATAATATACATATCCCCGCATATATTCCCCAC TTTCAAGATGCTGTGTATACAATATTAGCGATTATCGAGACCAGGCAGCG CATGTGCCGGCATCCAAAAAGGCACAAATTGAATACTTTAACTATTGTAA ACAAATTCTGGAGAGGAGGTGACCAAGGTCAAACAATCCGACGAATACGA ATACCTGGCGGCTAGTCTCGTTTCACTCCACCGCAAAGTGCCAGTTAACC AGTGCCGCTTGCCATGGCCACAAGCAGCCAGCTGTTGCCCAATGGCAACT TGTCCAGGAATGGCAAGACCAAGACAGAGGACGGTGAGGAGGTGGAAGCC GTTGTTGGAGCTCGTGCAGCAGGTGCAGATGCCGGAGTAGCACTAACGGG ACGACTAACAGGACACCCATCCACATCCGGAACGTTTATGAAACTGAAAA CCTATCTCCTAGCTCTGCGTCCCTGGTCGCTGTCCGCCAGTCTGGTTCCA ACGCTGCTCGGCTCAGCCCTGGCCTACCGCTCCCAGTGGGCGGAGGAGTT TTCGCTGGCCACCTTCTTTCTCACCGCCTTCACCGTGGTCACCGTCCACT GCGCCGGCAACGTAGTTAACACCTATTTCGACTTCATCAAGGGCATTGAC AAGCAGAAAGCCGACGACCGCACGCTGGTGGATCACATACTCACCAAGGA TGAGGTGGTATCGCTGGGTGCCATTCTGTACATGGCTGGCTGTGGAGGAT TTGTTTTGCTGGCTGTGCTCAGTCCGGCGAAAATGGAGCACCTGGCACTG ATCTACTTCGGGGGATTGTCCTCGAGCTTCCTGTACACCGGAGGCATTGG TTTCAAGTACATCGCCCTGGGAGATCTGGTTATACTGATACTCTTTGGAC CCATCTCGGTGCTATTCGCCTTCATGTCGCAAACAGGTCATTTGGACTGG ACGACAATGGGCTATGCGATTCCTTTGGCTCTCAACACGGAGGCCATCCT GCACAGCAACAACACAAGGGATGCGGACAACGATCGCCGGGCTGGAATCG TAACGCTCGCCATTTTGATAGGCCGTACAGCATCGCACGTTCTGTATGCC ATGCTGCTCTTTGCACCCTACTCATTGTTCTTCATCTTCGGTTTGAAGTA CTCTCTGTGGTTCCTGCTGCCGCTGGTAACCCTGCCGCAAGCGTTCCAGA TTGAGAAACGTTTCCGCAACGAACAGACGATGCATCTGGTGCCTCGGCAA ACAGCCAAGCTGAACTTCTTTTTTGGCATCTTGTACGTGGTGGCCTGCTG TTGTGCCCATCAGTTGCCCACCTTTGGATTGCGAAGAAATTGATAGACGG GTTAAACGTACGGATCTGGCGGAAAATCTGAATCAGTGAGAACCTGGTGC AATGTTTTAGGGAATTTCATTAGGTTTTAGTCAATGTGAGTAACATAAAG GATGGGAGAATGAAGCTTTGTCAGCTTCTCACAGTTTGACGTTGCGCAAA TTTCGAATGCTGCTAGTCGCCCGTTTGATTCTAAACTTTTGAACTGAACA TATCCTAGCCCTAATGGGTCGATTAACTTGAGAGAAAACCTATGGTTAAT GTAAGACATTTTGAAATACGGATTACAGTCCTAGTATCAGCTTAACAGTT TACTATTTCGTTTCCAAACGATAATCCATAGGCATTGTGCAAACATAAAT GGAATTTAATCCAATTGGATAAGCTAAAAAGTCTCTAACCAAATGCATAC TTAAAATAAATATTAACATTATTTGGCAAATATTTTGATAGTCAAATGTT AAGATCTGAAACATTTTATTTGCTTTCAAGTTGTTTAAACCAAAAGTATG ATATTAGACAATTAATTTCTATGTCAAAAATTGCTTAAATTGCCCAAAGG TTTGGCGACCATCGACCTTAACCTATCCCACTCGCTTTTTATTTATTTCA TATCGTCTCAATTTTAAGTCCTAACCAATCAATGTTATTAATAATAATCA TACTCTTCCTCTCGCTCGTTGGGAATCACGGACCAAGAACGTTTTGTGCA GCAGCAACCAACCAATAATTGTAATTCAACTCACTTTTATATTATTCGAA ACAATATATATATTTATATATATCACCACATTCACACGGGTGCAGATACT TAAGTTTCGCGAATCAAAATGCAGATTTACTTTATGAATAGAAGTGCTTG AAAATGCGGCTAAGTTGAAAGTTTTTTTTCGGCAATTGGCTGGCTTGCTT TGTGAGTTTTATATTATATAATATTTATAATATTATATACACGAACACGA GCATATATATATATATTTATACACAAATCTAGATCATGTAAGCCCAGTGT CTAGCGGCAGGCTCAGAGTGAGAATTATATAAAGGAAAAATCGTGGAAAA AAGCAAAACGAAAACAGAACACAAATTACAATTTTTAAATAACTATATAC GTATGTAGATGTCGAGGCGAAGGAGCAACAATTGTTTTCCATTAACAATA GCGTATGCATATAAACAAATAGCTTTAAATAACAAACAGATGAGGAGAAA GCCAAAACCCATTCGCATTATACATTATAATCTATTGTGTAACTGAACAT TTGTGTGGCAATATTTATTTGTACGCTAGATTTTTGTATATTCATTCATT CTTTTGTATATCGCATAAAGAAATGCTTCTGTTGGAATCGCTCAGTAACC GAGTGGAATTGAACTAAGTGAAAACTTCGTAGACTACAAATCAACAACCA GATGAACAATAATAATTATAATGCTATTGATAATTAAATGTTTAATTAGA CAATGTAAACGAGAATTGTGTAATATAAACTGATTTATATTTTATTGAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
heix-RA | 3229 | heix-RA | 40..3188 | 1..3149 | 15745 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6704..7117 | 2697..3100 | 165 | 53.7 | Plus |
Dbif\P-element_M | 2935 | Dbif\P-element_M P_M 2935bp Derived from X60990. | 2505..2616 | 2980..2870 | 151 | 65.2 | Minus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 22..79 | 3043..3100 | 137 | 70.7 | Plus |
S2 | 1735 | S2 S2 1735bp | 52..147 | 2880..2781 | 120 | 63.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16294902..16295414 | 2635..3147 | 100 | == | Minus |
chr2L | 16295490..16297048 | 1005..2559 | 98 | <- | Minus |
chr2L | 16297727..16298730 | 1..1004 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
heix-RA | 1..1080 | 564..1643 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
heix-RA | 1..1080 | 564..1643 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
heix-RA | 1..1080 | 564..1643 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
heix-RA | 1..1080 | 564..1643 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
heix-RA | 1..1080 | 564..1643 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
heix-RA | 1..3147 | 1..3147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
heix-RA | 1..3147 | 1..3147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
heix-RA | 1..3130 | 18..3147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
heix-RA | 1..3147 | 1..3147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
heix-RA | 1..3130 | 18..3147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16296051..16298193 | 1005..3147 | 100 | <- | Minus |
2L | 16298872..16299875 | 1..1004 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16296051..16298193 | 1005..3147 | 100 | <- | Minus |
2L | 16298872..16299875 | 1..1004 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16296051..16298193 | 1005..3147 | 100 | <- | Minus |
2L | 16298872..16299875 | 1..1004 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16296051..16298193 | 1005..3147 | 100 | <- | Minus |
arm_2L | 16298872..16299875 | 1..1004 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16296051..16298193 | 1005..3147 | 100 | <- | Minus |
2L | 16298872..16299875 | 1..1004 | 100 | Minus |
Translation from 563 to 1642
> LD08295.pep MATSSQLLPNGNLSRNGKTKTEDGEEVEAVVGARAAGADAGVALTGRLTG HPSTSGTFMKLKTYLLALRPWSLSASLVPTLLGSALAYRSQWAEEFSLAT FFLTAFTVVTVHCAGNVVNTYFDFIKGIDKQKADDRTLVDHILTKDEVVS LGAILYMAGCGGFVLLAVLSPAKMEHLALIYFGGLSSSFLYTGGIGFKYI ALGDLVILILFGPISVLFAFMSQTGHLDWTTMGYAIPLALNTEAILHSNN TRDADNDRRAGIVTLAILIGRTASHVLYAMLLFAPYSLFFIFGLKYSLWF LLPLVTLPQAFQIEKRFRNEQTMHLVPRQTAKLNFFFGILYVVACCCAHQ LPTFGLRRN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15328-PA | 370 | GF15328-PA | 12..369 | 3..358 | 1624 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24176-PA | 358 | GG24176-PA | 1..358 | 1..359 | 1834 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11433-PA | 375 | GH11433-PA | 27..375 | 11..359 | 1516 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
heix-PA | 359 | CG5876-PA | 1..359 | 1..359 | 1841 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14725-PA | 352 | GI14725-PA | 47..352 | 54..359 | 1517 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14097-PA | 354 | GL14097-PA | 4..353 | 14..358 | 1548 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19197-PA | 354 | GA19197-PA | 4..353 | 14..358 | 1548 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17914-PA | 359 | GM17914-PA | 1..359 | 1..359 | 1873 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21924-PA | 359 | GD21924-PA | 1..359 | 1..359 | 1873 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17166-PA | 377 | GJ17166-PA | 51..377 | 28..359 | 1537 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24744-PA | 359 | GK24744-PA | 29..359 | 13..359 | 1520 | 84.1 | Plus |
Dwil\GK23562-PA | 331 | GK23562-PA | 29..331 | 13..359 | 1310 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19370-PA | 358 | GE19370-PA | 1..358 | 1..359 | 1830 | 97.2 | Plus |
Translation from 563 to 1642
> LD08295.hyp MATSSQLLPNGNLSRNGKTKTEDGEEVEAVVGARAAGADAGVALTGRLTG HPSTSGTFMKLKTYLLALRPWSLSASLVPTLLGSALAYRSQWAEEFSLAT FFLTAFTVVTVHCAGNVVNTYFDFIKGIDKQKADDRTLVDHILTKDEVVS LGAILYMAGCGGFVLLAVLSPAKMEHLALIYFGGLSSSFLYTGGIGFKYI ALGDLVILILFGPISVLFAFMSQTGHLDWTTMGYAIPLALNTEAILHSNN TRDADNDRRAGIVTLAILIGRTASHVLYAMLLFAPYSLFFIFGLKYSLWF LLPLVTLPQAFQIEKRFRNEQTMHLVPRQTAKLNFFFGILYVVACCCAHQ LPTFGLRRN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
heix-PA | 359 | CG5876-PA | 1..359 | 1..359 | 1841 | 100 | Plus |