BDGP Sequence Production Resources |
Search the DGRC for LD08328
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 83 |
Well: | 28 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG11986-RA |
Protein status: | LD08328.pep: gold |
Preliminary Size: | 1392 |
Sequenced Size: | 1241 |
Gene | Date | Evidence |
---|---|---|
CG11986 | 2001-01-01 | Release 2 assignment |
CG11986 | 2001-11-29 | Blastp of sequenced clone |
CG11986 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11986 | 2008-04-29 | Release 5.5 accounting |
CG11986 | 2008-08-15 | Release 5.9 accounting |
CG11986 | 2008-12-18 | 5.12 accounting |
1241 bp (1241 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069378
> LD08328.complete CTTTGATAAGCAATGTGTGGACGCACCTGTCTAACTCTAGACCCTGATCA GGTAATTTGTGCCTGTAAATATCCAAAAAAATCTACTCGAAAGGAGCCGG ATTTCAAAGAGAAAGATGATATGAAAGATGGGGAAGGATCCGAAATGGAG ACTCCCGAGTGGAGGGCGGAATACAACCTGGGTAGACGCTACCAGGCCTC CTACAACATAGCCCCTACTGATATTACGCCCGTGATCGTGTCCGCAGCTC ATTTTTCAGACGCCGAGGATCAAGAGTGCGCCCGCGTGGTAACGCCCATG ATGTGGGGCATGATTCCCTTTTGGCACAAGGGTGACTATCGGCGGCATGG CCTTACCACCAACAATTGCCGTCTGGAACACCTGATGGACTCCAAGCTCT ATCGCGGTCCCTTCAAGCGAGGTCAGCGGTGTGTAGTTATTTGCGAAGGA TTCTATGAGTGGCAGACGGCTGGACCTGCGAAGAAGCCATCGGAGCGTGA GGCTTACCTGGTATTCGTACCCCAGGCGGCGGATGTGAAGATCTACGACA AGAATACATGGTCGCCCCAGGATGTGAAGCTTTTGCGAATGGCTGGACTT TTTGACGTCTGGGAGGATGAAAGTGGCGACAAGATGTACAGCTACAGTAT TATCACCTTCCAGTCCAGCAAAATTATGTCCTGGATGCACTACCGCATGC CAGCGATCCTGGAAACCGAGCAGCAGATGAATGATTGGCTGGACTTTAAG CGAGTTAGCGACAAGGAGGCCTTGGCTACATTGCGTCCGGCTACCGAACT GCAGTGGCATCGTGTTACCAAGCTGGTAAACAACTCGCGAAACAAAAGCG AGGAGTGCAACAAGCCGATCGAATTGGCGGCTAAGCCCGCAAAGCCACCG ATGAACAAAACGATGATGTCTTGGCTGAATGCCCGTAAGAAGCGGGAAGA TCAAATCAAAGCAAAACAGAGCGACGATGAGGATCAGGAAAAAGAAGCTA CGACCATGGGAGGGACCTCCGCTGACGGCTCACCCGTAGAGAGGCCCGCC AAGCGACCCAGATTCAGGGACTTTAAGAGGAATCGTACGGCAGCTCCCCC GCAGAGCAGCGGCAGCTAGATGAAATCGGGCAAAAGATAAACCTCATCAG TAACTAAAGTTCCATAGTTTGTAGTACATTAAGTTTATTTTCAGTAAAAA CCAAAATTTTTATTCTCAATAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11986-RA | 1417 | CG11986-RA | 107..1328 | 1..1222 | 6110 | 100 | Plus |
CG11986.b | 1258 | CG11986.b | 43..1258 | 1..1220 | 6015 | 99.6 | Plus |
CG11986.a | 1051 | CG11986.a | 70..1051 | 239..1220 | 4880 | 99.7 | Plus |
CG11986.a | 1051 | CG11986.a | 43..74 | 1..32 | 160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4841382..4841413 | 1..32 | 100 | -> | Plus |
chr3R | 4841463..4842162 | 33..732 | 99 | -> | Plus |
chr3R | 4842229..4842716 | 733..1220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11986-RA | 1..1107 | 13..1119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11986-RA | 1..1107 | 13..1119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11986-RA | 1..1107 | 13..1119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11986-RA | 1..1107 | 13..1119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11986-RA | 1..1107 | 13..1119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11986-RA | 43..1262 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11986-RA | 43..1262 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11986-RA | 43..1262 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11986-RA | 43..1262 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11986-RA | 43..1262 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9015488..9015519 | 1..32 | 100 | -> | Plus |
3R | 9015569..9016268 | 33..732 | 100 | -> | Plus |
3R | 9016335..9016822 | 733..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9015488..9015519 | 1..32 | 100 | -> | Plus |
3R | 9015569..9016268 | 33..732 | 100 | -> | Plus |
3R | 9016335..9016822 | 733..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9015488..9015519 | 1..32 | 100 | -> | Plus |
3R | 9015569..9016268 | 33..732 | 100 | -> | Plus |
3R | 9016335..9016822 | 733..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4841210..4841241 | 1..32 | 100 | -> | Plus |
arm_3R | 4841291..4841990 | 33..732 | 100 | -> | Plus |
arm_3R | 4842057..4842544 | 733..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8756400..8757099 | 33..732 | 100 | -> | Plus |
3R | 8757166..8757653 | 733..1220 | 100 | Plus | |
3R | 8756319..8756350 | 1..32 | 100 | -> | Plus |
Translation from 12 to 1118
> LD08328.hyp MCGRTCLTLDPDQVICACKYPKKSTRKEPDFKEKDDMKDGEGSEMETPEW RAEYNLGRRYQASYNIAPTDITPVIVSAAHFSDAEDQECARVVTPMMWGM IPFWHKGDYRRHGLTTNNCRLEHLMDSKLYRGPFKRGQRCVVICEGFYEW QTAGPAKKPSEREAYLVFVPQAADVKIYDKNTWSPQDVKLLRMAGLFDVW EDESGDKMYSYSIITFQSSKIMSWMHYRMPAILETEQQMNDWLDFKRVSD KEALATLRPATELQWHRVTKLVNNSRNKSEECNKPIELAAKPAKPPMNKT MMSWLNARKKREDQIKAKQSDDEDQEKEATTMGGTSADGSPVERPAKRPR FRDFKRNRTAAPPQSSGS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11986-PA | 368 | CG11986-PA | 1..368 | 1..368 | 1993 | 100 | Plus |
Translation from 12 to 1118
> LD08328.pep MCGRTCLTLDPDQVICACKYPKKSTRKEPDFKEKDDMKDGEGSEMETPEW RAEYNLGRRYQASYNIAPTDITPVIVSAAHFSDAEDQECARVVTPMMWGM IPFWHKGDYRRHGLTTNNCRLEHLMDSKLYRGPFKRGQRCVVICEGFYEW QTAGPAKKPSEREAYLVFVPQAADVKIYDKNTWSPQDVKLLRMAGLFDVW EDESGDKMYSYSIITFQSSKIMSWMHYRMPAILETEQQMNDWLDFKRVSD KEALATLRPATELQWHRVTKLVNNSRNKSEECNKPIELAAKPAKPPMNKT MMSWLNARKKREDQIKAKQSDDEDQEKEATTMGGTSADGSPVERPAKRPR FRDFKRNRTAAPPQSSGS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16577-PA | 376 | GF16577-PA | 1..369 | 1..368 | 1663 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14649-PA | 378 | GG14649-PA | 1..368 | 1..368 | 1762 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19381-PA | 357 | GH19381-PA | 1..349 | 1..355 | 1319 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11986-PA | 368 | CG11986-PA | 1..368 | 1..368 | 1993 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22584-PA | 361 | GI22584-PA | 1..350 | 1..360 | 1350 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12116-PA | 378 | GL12116-PA | 1..359 | 1..356 | 1588 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11312-PA | 378 | GA11312-PA | 1..358 | 1..355 | 1586 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23780-PA | 353 | GM23780-PA | 1..351 | 1..363 | 1736 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18590-PA | 141 | GD18590-PA | 1..138 | 1..139 | 722 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10305-PA | 360 | GJ10305-PA | 1..339 | 1..350 | 1382 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11678-PA | 390 | GK11678-PA | 1..374 | 1..361 | 1518 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25924-PA | 378 | GE25924-PA | 1..358 | 1..355 | 1767 | 91.1 | Plus |