BDGP Sequence Production Resources |
Search the DGRC for LD08427
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 84 |
Well: | 27 |
Vector: | pBS SK- |
Associated Gene/Transcript | Crk-RB |
Protein status: | LD08427.pep: gold |
Preliminary Size: | 1229 |
Sequenced Size: | 1046 |
Gene | Date | Evidence |
---|---|---|
CG1587 | 2001-01-01 | Release 2 assignment |
CG1587 | 2001-10-10 | Blastp of sequenced clone |
CG1587 | 2003-01-01 | Sim4 clustering to Release 3 |
Crk | 2008-04-29 | Release 5.5 accounting |
Crk | 2008-08-15 | Release 5.9 accounting |
Crk | 2008-12-18 | 5.12 accounting |
1046 bp (1046 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061094
> LD08427.complete AATTCTGGTATATAATAGGCTGTATGCTATATTTGCATTATATCACATAA TTTCTATTTATTTAATCTGGACGGAATTTGTTGTAATTTGTCTAAGATAA ACCTTAAACGGAAATGGATACATTTGACGTTTCTGATAGGAACAGCTGGT ACTTTGGTCCCATGTCTAGACAGGATGCTACTGAAGTTTTGATGAACGAA CGCGAGCGGGGAGTGTTTTTAGTCCGTGATAGTAACTCGATAGCAGGGGA TTATGTACTTTGTGATCAAATCGTTTACCGCATTGGGGATCAGTCTTTTG ACAATCTACCGAAACTCTTAACTTTTTACACTCTTCATTATTTGGATACA ACCCCTTTAAAACGGCCTGCGTGTAGAAGGGTGGAAAAAGTAATAGGAAA GTTCGATTTCGTTGGCAGCGATCAAGATGATTTACCTTTTCAAAGAGGTG AAGTTTTAACAATAGTTCGAAAAGACGAGGATCAATGGTGGACTGCGCGT AACTCCTCGGGGAAAATTGGTCAAATACCGGTTCCCTATATACAACAGTA TGACGATTATATGGATGAAGATGCTATTGATAAAAACGAACCTTCCATTT CGGGATCTAGCAATGTATTTGAAAGTACTCTTAAAAGGACAGATTTAAAT CGAAAACTACCTGCATACGCCCGCGTAAAACAGTCAAGGGTCCCTAACGC ATACGATAAGACTGCATTAAAATTGGAAATAGGTGACATTATTAAAGTCA CTAAAACAAACATTAATGGGCAATGGGAGGGAGAATTAAATGGAAAAAAT GGTCATTTTCCCTTCACGCACGTTGAATTTGTCGATGATTGTGATTTAAG CAAAAACTCCACAGAAATATGCTAAATAGGAAGGAATGGAAGGAATTTCT TTTGATAATTTTGATTTTTGAGCTAATTGTATGATTAATAAGTTGTGCAT ACCAATTGTTAACATAATCAGAAAATTAAAATCTTATTAAGTAAAATAAA AATAAACGGGTACGAAGGACATAATAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Crk-RA | 1503 | Crk-RA | 690..1455 | 264..1029 | 3830 | 100 | Plus |
Crk.e | 1232 | Crk.e | 419..1184 | 264..1029 | 3830 | 100 | Plus |
Crk.a | 1387 | Crk.a | 859..1339 | 549..1029 | 2405 | 100 | Plus |
Crk.a | 1387 | Crk.a | 434..719 | 264..549 | 1430 | 100 | Plus |
Crk.a | 1387 | Crk.a | 117..380 | 1..264 | 1320 | 100 | Plus |
Crk-RA | 1503 | Crk-RA | 373..636 | 1..264 | 1320 | 100 | Plus |
Crk.e | 1232 | Crk.e | 87..350 | 1..264 | 1320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr4 | 1351717 | chr4 | 233385..233759 | 651..1025 | 1875 | 100 | Plus |
chr4 | 1351717 | chr4 | 232233..232389 | 264..420 | 785 | 100 | Plus |
chr4 | 1351717 | chr4 | 230936..231080 | 1..145 | 725 | 100 | Plus |
chr4 | 1351717 | chr4 | 232448..232576 | 420..548 | 645 | 100 | Plus |
chr4 | 1351717 | chr4 | 231150..231270 | 144..264 | 605 | 100 | Plus |
chr4 | 1351717 | chr4 | 233219..233323 | 546..650 | 525 | 100 | Plus |
chr4 | 1351717 | chr4 | 236762..236820 | 420..478 | 280 | 98.3 | Plus |
chr4 | 1351717 | chr4 | 236645..236705 | 358..418 | 275 | 96.7 | Plus |
chr4 | 1351717 | chr4 | 236602..236646 | 264..308 | 195 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1348131 | 4 | 212791..213169 | 651..1029 | 1895 | 100 | Plus |
4 | 1348131 | 4 | 211639..211795 | 264..420 | 785 | 100 | Plus |
4 | 1348131 | 4 | 210342..210486 | 1..145 | 725 | 100 | Plus |
4 | 1348131 | 4 | 211854..211982 | 420..548 | 645 | 100 | Plus |
4 | 1348131 | 4 | 210556..210676 | 144..264 | 605 | 100 | Plus |
4 | 1348131 | 4 | 212625..212729 | 546..650 | 525 | 100 | Plus |
4 | 1348131 | 4 | 216168..216226 | 420..478 | 280 | 98.3 | Plus |
4 | 1348131 | 4 | 216051..216111 | 358..418 | 275 | 96.7 | Plus |
4 | 1348131 | 4 | 216008..216052 | 264..308 | 195 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1331231 | 4 | 212791..213169 | 651..1029 | 1895 | 100 | Plus |
4 | 1331231 | 4 | 211639..211795 | 264..420 | 785 | 100 | Plus |
4 | 1331231 | 4 | 210342..210486 | 1..145 | 725 | 100 | Plus |
4 | 1331231 | 4 | 211854..211982 | 420..548 | 645 | 100 | Plus |
4 | 1331231 | 4 | 210556..210676 | 144..264 | 605 | 100 | Plus |
4 | 1331231 | 4 | 212625..212729 | 546..650 | 525 | 100 | Plus |
4 | 1331231 | 4 | 216168..216226 | 420..478 | 280 | 98.3 | Plus |
4 | 1331231 | 4 | 216051..216111 | 358..418 | 275 | 96.7 | Plus |
4 | 1331231 | 4 | 216008..216052 | 264..308 | 195 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 1553..1607 | 949..890 | 118 | 70 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr4 | 230936..231080 | 1..145 | 100 | -> | Plus |
chr4 | 231152..231269 | 146..263 | 100 | -> | Plus |
chr4 | 232233..232388 | 264..419 | 100 | -> | Plus |
chr4 | 232448..232576 | 420..548 | 100 | -> | Plus |
chr4 | 233222..233323 | 549..650 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Crk-RB | 1..762 | 114..875 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Crk-RB | 1..762 | 114..875 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Crk-RB | 1..762 | 114..875 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Crk-RB | 1..762 | 114..875 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Crk-RB | 1..762 | 114..875 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Crk-RB | 1..1025 | 1..1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Crk-RB | 117..1141 | 1..1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Crk-RB | 119..1143 | 1..1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Crk-RB | 1..1025 | 1..1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Crk-RB | 119..1143 | 1..1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 212791..213165 | 651..1025 | 100 | Plus | |
4 | 210342..210486 | 1..145 | 100 | -> | Plus |
4 | 210558..210675 | 146..263 | 100 | -> | Plus |
4 | 211639..211794 | 264..419 | 100 | -> | Plus |
4 | 211854..211982 | 420..548 | 100 | -> | Plus |
4 | 212628..212729 | 549..650 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 212791..213165 | 651..1025 | 100 | Plus | |
4 | 210342..210486 | 1..145 | 100 | -> | Plus |
4 | 210558..210675 | 146..263 | 100 | -> | Plus |
4 | 211639..211794 | 264..419 | 100 | -> | Plus |
4 | 211854..211982 | 420..548 | 100 | -> | Plus |
4 | 212628..212729 | 549..650 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 212791..213165 | 651..1025 | 100 | Plus | |
4 | 210342..210486 | 1..145 | 100 | -> | Plus |
4 | 210558..210675 | 146..263 | 100 | -> | Plus |
4 | 211639..211794 | 264..419 | 100 | -> | Plus |
4 | 211854..211982 | 420..548 | 100 | -> | Plus |
4 | 212628..212729 | 549..650 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_4 | 230968..231112 | 1..145 | 100 | -> | Plus |
arm_4 | 231184..231301 | 146..263 | 100 | -> | Plus |
arm_4 | 232265..232420 | 264..419 | 100 | -> | Plus |
arm_4 | 232480..232608 | 420..548 | 100 | -> | Plus |
arm_4 | 233254..233355 | 549..650 | 100 | -> | Plus |
arm_4 | 233417..233791 | 651..1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 212791..213165 | 651..1025 | 100 | Plus | |
4 | 210342..210486 | 1..145 | 100 | -> | Plus |
4 | 210558..210675 | 146..263 | 100 | -> | Plus |
4 | 211639..211794 | 264..419 | 100 | -> | Plus |
4 | 211854..211982 | 420..548 | 100 | -> | Plus |
4 | 212628..212729 | 549..650 | 100 | -> | Plus |
Translation from 113 to 874
> LD08427.pep MDTFDVSDRNSWYFGPMSRQDATEVLMNERERGVFLVRDSNSIAGDYVLC DQIVYRIGDQSFDNLPKLLTFYTLHYLDTTPLKRPACRRVEKVIGKFDFV GSDQDDLPFQRGEVLTIVRKDEDQWWTARNSSGKIGQIPVPYIQQYDDYM DEDAIDKNEPSISGSSNVFESTLKRTDLNRKLPAYARVKQSRVPNAYDKT ALKLEIGDIIKVTKTNINGQWEGELNGKNGHFPFTHVEFVDDCDLSKNST EIC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23415-PA | 342 | GF23415-PA | 1..256 | 1..243 | 993 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16379-PA | 269 | GG16379-PA | 1..268 | 1..252 | 1257 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23941-PA | 277 | GH23941-PA | 1..267 | 1..248 | 1111 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Crk-PB | 253 | CG1587-PB | 1..253 | 1..253 | 1347 | 100 | Plus |
Crk-PA | 271 | CG1587-PA | 1..271 | 1..253 | 1318 | 93.4 | Plus |
Crk-PC | 271 | CG1587-PC | 1..271 | 1..253 | 1318 | 93.4 | Plus |
Crk-PE | 263 | CG1587-PE | 1..263 | 1..253 | 1249 | 90.4 | Plus |
Crk-PD | 184 | CG1587-PD | 1..168 | 1..150 | 746 | 86.3 | Plus |
Crk-PH | 64 | CG1587-PH | 1..53 | 1..53 | 267 | 96.2 | Plus |
Crk-PG | 84 | CG1587-PG | 1..50 | 1..50 | 265 | 100 | Plus |
drk-PD | 211 | CG6033-PD | 58..209 | 10..146 | 146 | 27 | Plus |
drk-PF | 211 | CG6033-PF | 58..209 | 10..146 | 146 | 27 | Plus |
drk-PA | 211 | CG6033-PA | 58..209 | 10..146 | 146 | 27 | Plus |
drk-PB | 211 | CG6033-PB | 58..209 | 10..146 | 146 | 27 | Plus |
drk-PC | 211 | CG6033-PC | 58..209 | 10..146 | 146 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14066-PA | 293 | GI14066-PA | 1..279 | 1..253 | 1060 | 73.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18154-PA | 297 | GL18154-PA | 1..285 | 1..252 | 1125 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13993-PA | 297 | GA13993-PA | 1..285 | 1..252 | 1125 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23242-PA | 271 | GM23242-PA | 1..270 | 1..252 | 1322 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14194-PA | 108 | GD14194-PA | 1..107 | 146..252 | 565 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18986-PA | 298 | GJ18986-PA | 1..283 | 1..246 | 1084 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13611-PA | 280 | GK13611-PA | 1..267 | 1..252 | 1129 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14540-PA | 271 | GE14540-PA | 1..270 | 1..252 | 1309 | 92.2 | Plus |
Translation from 113 to 874
> LD08427.hyp MDTFDVSDRNSWYFGPMSRQDATEVLMNERERGVFLVRDSNSIAGDYVLC DQIVYRIGDQSFDNLPKLLTFYTLHYLDTTPLKRPACRRVEKVIGKFDFV GSDQDDLPFQRGEVLTIVRKDEDQWWTARNSSGKIGQIPVPYIQQYDDYM DEDAIDKNEPSISGSSNVFESTLKRTDLNRKLPAYARVKQSRVPNAYDKT ALKLEIGDIIKVTKTNINGQWEGELNGKNGHFPFTHVEFVDDCDLSKNST EIC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Crk-PB | 253 | CG1587-PB | 1..253 | 1..253 | 1347 | 100 | Plus |
Crk-PA | 271 | CG1587-PA | 1..271 | 1..253 | 1318 | 93.4 | Plus |
Crk-PC | 271 | CG1587-PC | 1..271 | 1..253 | 1318 | 93.4 | Plus |
Crk-PE | 263 | CG1587-PE | 1..263 | 1..253 | 1249 | 90.4 | Plus |
Crk-PD | 184 | CG1587-PD | 1..168 | 1..150 | 746 | 86.3 | Plus |