BDGP Sequence Production Resources |
Search the DGRC for LD08471
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 84 |
Well: | 71 |
Vector: | pBS SK- |
Associated Gene/Transcript | MESR3-RA |
Protein status: | LD08471.pep: gold |
Preliminary Size: | 2120 |
Sequenced Size: | 2094 |
Gene | Date | Evidence |
---|---|---|
CG15162 | 2001-01-01 | Release 2 assignment |
CG15162 | 2001-11-09 | Blastp of sequenced clone |
CG15162 | 2003-01-01 | Sim4 clustering to Release 3 |
MESR3 | 2008-04-29 | Release 5.5 accounting |
MESR3 | 2008-08-15 | Release 5.9 accounting |
MESR3 | 2008-12-18 | 5.12 accounting |
2094 bp (2094 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069379
> LD08471.complete GCGTGCGGACGTAAAGTAACTGCGACTGTTTCGTCTTTGGTGCGCGTATA CTGGTGCCGTTTTATCACGTTGTATCTTAATAATAAGCGATAACAGCAGC AGCATTGGCCACTAATTAAATGCTGAAGTGACTGTGTGTCAATTGAATCT GTACGACTTTTGATTGAATTAAATTGCGAATTACAAAACACAAAAGCAAA CGGCAATTAACGGTTATAAAGCCGGACCAGTGCGGCAATAAAAACAATTT GATCGGGTGCCAAAAGATATTTTTGCACACACTCCTTTTTTGGGATAATT AAAAGGACAGTGCTTGCCCGTGTGTGTCCTTCCGCTGGACTGGAGTGTGT GTGTGTGTAGTGGTTGTGAAGGAATTTCTCATTAAACCGACGCTAAAAGG ATTACGAACCCGTTCATCTTCATCAGACCCGCGTATCGAGTAACGTTCCT TCTTCGATTTTTTCATCGACCGGAAACTTAAACCCGAAAACGGATCTTGA AATTATGATGTCGCATCAACTGCAGCAGACACGCCGCCGTTTGGGCTCCG TTAGCGATTCGGCGCCACCATCGGAGTCCAGTGAGGGCACAGGCTCCTCC CTGGAGCCACGGGACGAGCTGATTCTCCATCCGGACTGGTCGGCCCACTC GCATTCGTCGGCACAGAGGAGCAGCGCCCATGGAACCACATCGCTGTACA ATGCCTCGGATATCGATGCGGATACCATCAGCACGGACACCACGAGCAAC ACAAATCTATCGGACTACGAACGTGGTCAGGTGGAGAGTTTCTTCGGCGG ATTGGGCACAGAGATATTCGTGAGCGGCGCTTTGGCCAATCTCTACGAGG GAACCGGAAACGATGGCGACTGGCGTTTGGTGTTCACCGGCATACCGGTG ATACTGCACGACAAGGGAAACTCCAAGGCCAGAGCCATACCCAGAGTGAC GCTGGTTCTGGCGGAGAGGGGCTCCTGCTTCGCCCTGTGGTCGGATCGGA TTGATAACCTGTCGAACTATCGGATCGCGGGTCCCTCGTTCCACACGATG TGCCGGTCCAGCAATCATCAGCAGATGATTGGCTTCAGCTTCGATTCCAC GGATGCGGCACGCGAATTGTGGCAGCACGTGGAGCGTTTGGTCAGCAATC CAGAGAATGAGGCTCTAACCGTGGCCGGAACCCGCAAGCCGAAGAAACAG AAGCGCGTCAAGCCGGCTCCCTTGCCACCGAAGTCCCAGATTTCGCATCC ATGCCAATTCCACCACGTGACCAGTGTGGTCAAGGAGGACAGCGAACGGT ACTACAGCATGCAGGCCTTCGGACCCCCCAATCCCCAGCAGCATCGTTGA GTAGGGTCGGGCGCGTGGATCTGGAACACGAGCGCCCTATGGTGGCAGAA CTGAATCTGCCTCGAAGCCACAACCCAACACAACCACGAAGAAATCCAGG AAAAACCAACCCTTAGTTCGTATGGCTAGTTATAGATCCATTTGTTATAG GCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACAT TTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATA ACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGC GAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGA TAAGCAAGTTTTTTGTAAAACCTTTTCTAATATCACACATATACCCTTAT GCATAATTATATTCGTACCATATAGTCCTGATATCTATCGAGTAATCTTT ATGTCCACACTCGAAGGCACTGCGAATGATTTTGATGCCTGAAAAGCTTG CTTTCCTATCGGATTATTGACTAAGCCCAGACAAAGATACAAAAACAGTT TTTTGAAATCTATGTATCATATAACACACATAAATATATATGCTATATTA CACCTATCTATATATTATATATAGCTCTAAGCATTACATCATAGCCACTT GTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAA ATAAAGCTGACAAAGAGAGCCAATTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MESR3-RA | 2157 | MESR3-RA | 36..2113 | 1..2078 | 10390 | 100 | Plus |
MESR3.a | 2125 | MESR3.a | 481..2081 | 478..2078 | 8005 | 100 | Plus |
MESR3.b | 1648 | MESR3.b | 70..1640 | 508..2078 | 7855 | 100 | Plus |
MESR3.a | 2125 | MESR3.a | 36..482 | 1..447 | 2235 | 100 | Plus |
MESR3.b | 1648 | MESR3.b | 37..69 | 445..477 | 165 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18615990..18616434 | 1..445 | 99 | -> | Plus |
chr2L | 18630466..18630497 | 446..477 | 96 | -> | Plus |
chr2L | 18648322..18648351 | 478..507 | 93 | -> | Plus |
chr2L | 18658918..18660485 | 508..2075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MESR3-RA | 1..846 | 505..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MESR3-RA | 1..846 | 505..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MESR3-RB | 1..900 | 505..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MESR3-RA | 1..846 | 505..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MESR3-RB | 1..900 | 505..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MESR3-RA | 24..2098 | 1..2075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MESR3-RA | 24..2098 | 1..2075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MESR3-RA | 25..2099 | 1..2075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MESR3-RA | 24..2098 | 1..2075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MESR3-RA | 25..2099 | 1..2075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18617280..18617724 | 1..445 | 100 | -> | Plus |
2L | 18631743..18631774 | 446..477 | 100 | -> | Plus |
2L | 18649598..18649627 | 478..507 | 100 | -> | Plus |
2L | 18660209..18661776 | 508..2075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18617280..18617724 | 1..445 | 100 | -> | Plus |
2L | 18631743..18631774 | 446..477 | 100 | -> | Plus |
2L | 18649598..18649627 | 478..507 | 100 | -> | Plus |
2L | 18660209..18661776 | 508..2075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18617280..18617724 | 1..445 | 100 | -> | Plus |
2L | 18631743..18631774 | 446..477 | 100 | -> | Plus |
2L | 18649598..18649627 | 478..507 | 100 | -> | Plus |
2L | 18660209..18661776 | 508..2075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18617280..18617724 | 1..445 | 100 | -> | Plus |
arm_2L | 18631743..18631774 | 446..477 | 100 | -> | Plus |
arm_2L | 18649598..18649627 | 478..507 | 100 | -> | Plus |
arm_2L | 18660209..18661776 | 508..2075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18617280..18617724 | 1..445 | 100 | -> | Plus |
2L | 18631743..18631774 | 446..477 | 100 | -> | Plus |
2L | 18649598..18649627 | 478..507 | 100 | -> | Plus |
2L | 18660209..18661776 | 508..2075 | 100 | Plus |
Translation from 504 to 1349
> LD08471.pep MMSHQLQQTRRRLGSVSDSAPPSESSEGTGSSLEPRDELILHPDWSAHSH SSAQRSSAHGTTSLYNASDIDADTISTDTTSNTNLSDYERGQVESFFGGL GTEIFVSGALANLYEGTGNDGDWRLVFTGIPVILHDKGNSKARAIPRVTL VLAERGSCFALWSDRIDNLSNYRIAGPSFHTMCRSSNHQQMIGFSFDSTD AARELWQHVERLVSNPENEALTVAGTRKPKKQKRVKPAPLPPKSQISHPC QFHHVTSVVKEDSERYYSMQAFGPPNPQQHR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15063-PA | 281 | GF15063-PA | 1..281 | 2..281 | 1372 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21123-PA | 280 | GG21123-PA | 1..280 | 2..281 | 1476 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11217-PA | 278 | GH11217-PA | 1..278 | 2..281 | 1232 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MESR3-PC | 281 | CG15162-PC | 1..281 | 1..281 | 1482 | 100 | Plus |
MESR3-PB | 299 | CG15162-PB | 1..281 | 1..281 | 1482 | 100 | Plus |
MESR3-PA | 281 | CG15162-PA | 1..281 | 1..281 | 1482 | 100 | Plus |
MESR3-PD | 280 | CG15162-PD | 1..280 | 2..281 | 1477 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21592-PA | 281 | GI21592-PA | 16..281 | 14..281 | 1196 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18823-PA | 285 | GL18823-PA | 7..285 | 7..281 | 1305 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13542-PA | 285 | GA13542-PA | 7..285 | 7..281 | 1305 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17284-PA | 280 | GM17284-PA | 1..280 | 2..281 | 1497 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24146-PA | 280 | GD24146-PA | 1..280 | 2..281 | 1497 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17769-PA | 278 | GJ17769-PA | 1..278 | 2..281 | 1270 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23891-PA | 326 | GK23891-PA | 53..326 | 7..281 | 1286 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13196-PA | 280 | GE13196-PA | 1..280 | 2..281 | 1493 | 98.9 | Plus |
Translation from 504 to 1349
> LD08471.hyp MMSHQLQQTRRRLGSVSDSAPPSESSEGTGSSLEPRDELILHPDWSAHSH SSAQRSSAHGTTSLYNASDIDADTISTDTTSNTNLSDYERGQVESFFGGL GTEIFVSGALANLYEGTGNDGDWRLVFTGIPVILHDKGNSKARAIPRVTL VLAERGSCFALWSDRIDNLSNYRIAGPSFHTMCRSSNHQQMIGFSFDSTD AARELWQHVERLVSNPENEALTVAGTRKPKKQKRVKPAPLPPKSQISHPC QFHHVTSVVKEDSERYYSMQAFGPPNPQQHR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MESR3-PC | 281 | CG15162-PC | 1..281 | 1..281 | 1482 | 100 | Plus |
MESR3-PA | 281 | CG15162-PA | 1..281 | 1..281 | 1482 | 100 | Plus |
MESR3-PB | 299 | CG15162-PB | 1..281 | 1..281 | 1482 | 100 | Plus |
MESR3-PD | 280 | CG15162-PD | 1..280 | 2..281 | 1477 | 100 | Plus |