Clone LD08529 Report

Search the DGRC for LD08529

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:85
Well:29
Vector:pBS SK-
Associated Gene/TranscriptSry-beta-RA
Protein status:LD08529.pep: gold
Preliminary Size:1453
Sequenced Size:1265

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7938 2001-01-01 Release 2 assignment
CG7938 2002-05-30 Blastp of sequenced clone
CG7938 2003-01-01 Sim4 clustering to Release 3
Sry-beta 2008-04-29 Release 5.5 accounting
Sry-beta 2008-08-15 Release 5.9 accounting
Sry-beta 2008-12-18 5.12 accounting

Clone Sequence Records

LD08529.complete Sequence

1265 bp (1265 high quality bases) assembled on 2002-05-30

GenBank Submission: AY118322

> LD08529.complete
CACAGCTCTGGCGTTCACAACAAAATATACACAAATTAAATTGTTTAAGC
CGAATTTTCGATTGGATTCCACGGCGACTAGATGAGCTCCACGCGTCCGT
TTTGCTTCGTTTGCGGCAAGGAGAAGTCCGTGGGGGTGTTCCAGCTGATA
GAAGGCTGCATTGTGCCAGGAACCTTTAAGCCCATCAAGGATATACTGAA
ATACTTCGAGAAGATCATAAACCAGCGGCTGGAGCTCCTGCCCAACTCGG
CCGCCTGCCGGGACTGCCTGGAGTACCTCTTCAACTACGACAGGCTGGTG
AGGAATCTCAGCCAAGTGCAGCGCCAGATTGCGGACGCACTGCTCGGCTG
CAGGCAGGTGGAGGGCAAGGCGGAGACCAAGCAACAGGCGGCAAAGAGGG
CCCGCGTCCAGGTGCCGGCCTTCAAGATCGTCCAGGCCACCGCCCTCAAG
GAGCCCGAAAGGCAGCCGGGCGAGGAGGATGAGTGCGAGGAATTCATGAA
GGAGGAGATGCTGGACGAGGAGTTCCAGTTCAGCGAGCCGGACGACAGCA
TGCCGTCGTCGGAGGAGGAGTTCTTCACCGAGACCACCGAGATACCCTGC
CATATCTGCGGCGAGATGTTTTCCAGCCAGGAGGTGCTCGAGCGGCACAT
CAAGGCGGACACCTGCCAGAAGAGCGAGCAGGCCACCTGCAACGTGTGTG
GCTTGAAAGTGAAGGACGACGAGGTACTCGATCTGCATATGAACTTGCAC
GAGGGCAAAACAGAACTTGAATGCCGCTACTGCGACAAAAAGTTCTCGCA
CAAGCGGAACGTCCTGCGCCACATGGAGGTGCACTGGGACAAGAAGAAGT
ACCAGTGCGACAAGTGCGGCGAACGCTTCTCGCTCTCCTGGCTGATGTAC
AACCATCTGATGCGCCACGACGCCGAGGAGAACGCCCTGATCTGCGAGGT
GTGCCACCAGCAGTTCAAGACCAAGCGCACCTACAAGCACCACTTGCGCA
CCCACCAGACGGACCGGCCGCGCTACCCCTGCCCCGACTGCGAGAAATCG
TTCGTGGACAAGTACACCCTGAAGGTGCACAAGCGGGTCCACCAGCCGGT
CGAGAAGCCAGAGTCGGCGGAGGCCAAGGAAGCCACCGTCACGTTCTTTT
AGGGTAGTCCTTTGCTAGATTAATCTAAGAAGCCCAGCTCATGGGTGCAT
TAGCGCGCGTATGTATCATAAAATTAAATCTAAACAATTATTGACGGAAA
AAAAAAAAAAAAAAA

LD08529.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:57:53
Subject Length Description Subject Range Query Range Score Percent Strand
Sry-beta.c 5242 Sry-beta.c 71..1320 1..1250 6250 100 Plus
Sry-beta-RA 1459 Sry-beta-RA 71..1320 1..1250 6250 100 Plus
Sry-beta.d 1673 Sry-beta.d 71..1320 1..1250 6250 100 Plus
Sry-beta.c 5242 Sry-beta.c 4482..4619 733..870 300 81.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25862352..25863446 153..1247 5430 99.7 Plus
chr3R 27901430 chr3R 25862147..25862301 1..155 775 100 Plus
chr3R 27901430 chr3R 25866611..25866748 733..870 300 81.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:54:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:05:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30039937..30041034 153..1250 5490 100 Plus
3R 32079331 3R 30039732..30039886 1..155 775 100 Plus
3R 32079331 3R 30044196..30044333 733..870 300 81.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:30:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 29780768..29781865 153..1250 5490 100 Plus
3R 31820162 3R 29780563..29780717 1..155 775 100 Plus
3R 31820162 3R 29785027..29785164 733..870 300 81.1 Plus
Blast to na_te.dros performed 2019-03-16 19:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmir\TRIM 3111 Dmir\TRIM DMTRIM 3126bp Derived from X59239 (Rel. 35, Last updated, Version 3). 127..162 552..587 117 80.6 Plus

LD08529.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:06:10 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 25862147..25862300 1..154 100 -> Plus
chr3R 25862354..25863446 155..1247 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:41:18 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-beta-RA 1..1071 82..1152 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:37:00 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-beta-RA 1..1071 82..1152 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:22:48 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-beta-RA 1..1071 82..1152 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:28:38 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-beta-RA 1..1071 82..1152 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:00:30 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-beta-RA 1..1071 82..1152 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:09:19 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-beta-RA 1..1247 1..1247 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:37:00 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-beta-RA 1..1247 1..1247 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:22:48 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-beta-RA 14..1260 1..1247 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:28:38 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-beta-RA 1..1247 1..1247 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:00:30 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-beta-RA 14..1260 1..1247 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:06:10 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30039732..30039885 1..154 100 -> Plus
3R 30039939..30041031 155..1247 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:06:10 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30039732..30039885 1..154 100 -> Plus
3R 30039939..30041031 155..1247 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:06:10 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30039732..30039885 1..154 100 -> Plus
3R 30039939..30041031 155..1247 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:22:48 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25865454..25865607 1..154 100 -> Plus
arm_3R 25865661..25866753 155..1247 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:01:10 Download gff for LD08529.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29780770..29781862 155..1247 100   Plus
3R 29780563..29780716 1..154 100 -> Plus

LD08529.pep Sequence

Translation from 81 to 1151

> LD08529.pep
MSSTRPFCFVCGKEKSVGVFQLIEGCIVPGTFKPIKDILKYFEKIINQRL
ELLPNSAACRDCLEYLFNYDRLVRNLSQVQRQIADALLGCRQVEGKAETK
QQAAKRARVQVPAFKIVQATALKEPERQPGEEDECEEFMKEEMLDEEFQF
SEPDDSMPSSEEEFFTETTEIPCHICGEMFSSQEVLERHIKADTCQKSEQ
ATCNVCGLKVKDDEVLDLHMNLHEGKTELECRYCDKKFSHKRNVLRHMEV
HWDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQFKTKRT
YKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKPESAEAKE
ATVTFF*

LD08529.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:28:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22992-PA 357 GF22992-PA 1..357 1..346 1459 78 Plus
Dana\GF22993-PA 430 GF22993-PA 193..357 173..338 494 52.4 Plus
Dana\GF14340-PA 593 GF14340-PA 334..496 173..337 248 32.7 Plus
Dana\GF13861-PA 559 GF13861-PA 341..521 159..338 240 29.7 Plus
Dana\GF23243-PA 438 GF23243-PA 235..401 168..338 238 33.3 Plus
Dana\GF14340-PA 593 GF14340-PA 297..472 158..341 222 30.6 Plus
Dana\GF13861-PA 559 GF13861-PA 331..497 174..343 203 30 Plus
Dana\GF14340-PA 593 GF14340-PA 420..522 173..275 151 32.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:28:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11722-PA 356 GG11722-PA 1..356 1..356 1791 96.6 Plus
Dere\GG11724-PA 431 GG11724-PA 30..358 28..338 534 35.6 Plus
Dere\GG25148-PA 606 GG25148-PA 344..506 173..337 248 32.1 Plus
Dere\GG11973-PA 450 GG11973-PA 207..413 136..338 241 30.7 Plus
Dere\GG21465-PA 560 GG21465-PA 338..522 155..338 239 29.1 Plus
Dere\GG25148-PA 606 GG25148-PA 317..482 173..341 215 30.4 Plus
Dere\GG21465-PA 560 GG21465-PA 344..498 186..343 197 31 Plus
Dere\GG25148-PA 606 GG25148-PA 430..532 173..275 155 32.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:28:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19170-PA 347 GH19170-PA 1..345 1..346 1326 70.3 Plus
Dgri\GH19172-PA 419 GH19172-PA 4..344 8..337 488 35 Plus
Dgri\GH10919-PA 579 GH10919-PA 316..478 173..337 247 32.7 Plus
Dgri\GH18403-PA 454 GH18403-PA 235..417 147..338 236 31.2 Plus
Dgri\GH10979-PA 578 GH10979-PA 360..540 159..338 236 29.7 Plus
Dgri\GH10979-PA 578 GH10979-PA 357..516 181..343 200 31.3 Plus
Dgri\GH10979-PA 578 GH10979-PA 407..553 173..319 189 30.7 Plus
Dgri\GH10979-PA 578 GH10979-PA 248..488 122..343 170 26.1 Plus
Dgri\GH10919-PA 579 GH10919-PA 402..504 173..275 150 32.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:31
Subject Length Description Subject Range Query Range Score Percent Strand
Sry-beta-PB 356 CG7938-PB 1..356 1..356 1928 100 Plus
Sry-beta-PA 356 CG7938-PA 1..356 1..356 1928 100 Plus
Sry-delta-PA 433 CG17958-PA 30..360 28..338 597 35.9 Plus
ZIPIC-PA 457 CG7928-PA 195..420 119..338 295 30.3 Plus
Opbp-PA 562 CG30443-PA 188..405 136..337 273 27.5 Plus
CG15269-PA 587 CG15269-PA 327..489 173..337 264 32.1 Plus
Clamp-PA 561 CG1832-PA 344..523 160..338 253 29.9 Plus
Clamp-PB 566 CG1832-PB 367..528 173..338 251 30.1 Plus
CG6654-PA 639 CG6654-PA 414..575 173..338 248 30.1 Plus
CG15269-PA 587 CG15269-PA 294..465 167..341 243 29.9 Plus
Meics-PB 571 CG8474-PB 230..436 173..351 243 26.9 Plus
Meics-PA 583 CG8474-PA 242..448 173..351 243 26.9 Plus
su(Hw)-PC 941 CG8573-PC 412..585 170..345 242 30.2 Plus
su(Hw)-PB 941 CG8573-PB 412..585 170..345 242 30.2 Plus
su(Hw)-PA 941 CG8573-PA 412..585 170..345 242 30.2 Plus
crol-PG 878 CG14938-PG 279..439 173..337 241 30.3 Plus
crol-PF 907 CG14938-PF 291..468 159..337 238 29.8 Plus
CG15436-PA 346 CG15436-PA 155..316 172..337 237 30.7 Plus
CG14711-PA 377 CG14711-PA 214..363 156..309 237 30.1 Plus
crol-PH 686 CG14938-PH 206..390 166..354 236 30.2 Plus
crol-PD 878 CG14938-PD 279..439 173..337 236 31.5 Plus
crol-PF 907 CG14938-PF 448..622 173..347 235 30.7 Plus
crol-PD 878 CG14938-PD 419..593 173..347 235 30.7 Plus
crol-PC 756 CG14938-PC 206..389 166..354 235 30.2 Plus
crol-PB 891 CG14938-PB 412..595 166..354 235 30.2 Plus
crol-PI 962 CG14938-PI 412..595 166..354 235 30.2 Plus
crol-PE 962 CG14938-PE 412..595 166..354 235 30.2 Plus
crol-PA 962 CG14938-PA 412..595 166..354 235 30.2 Plus
crol-PG 878 CG14938-PG 412..593 166..347 234 29 Plus
crol-PH 686 CG14938-PH 291..472 166..347 234 29 Plus
crol-PC 756 CG14938-PC 290..471 166..347 234 29 Plus
crol-PB 891 CG14938-PB 496..677 166..347 234 29 Plus
crol-PI 962 CG14938-PI 496..677 166..347 234 29 Plus
crol-PE 962 CG14938-PE 496..677 166..347 234 29 Plus
crol-PA 962 CG14938-PA 496..677 166..347 234 29 Plus
su(Hw)-PC 941 CG8573-PC 338..519 161..337 233 29.9 Plus
su(Hw)-PB 941 CG8573-PB 338..519 161..337 233 29.9 Plus
su(Hw)-PA 941 CG8573-PA 338..519 161..337 233 29.9 Plus
crol-PB 891 CG14938-PB 279..429 173..327 233 31 Plus
crol-PI 962 CG14938-PI 279..429 173..327 233 31 Plus
crol-PE 962 CG14938-PE 279..429 173..327 233 31 Plus
crol-PA 962 CG14938-PA 279..429 173..327 233 31 Plus
CG11247-PC 522 CG11247-PC 179..360 172..355 232 28.6 Plus
CG11247-PA 522 CG11247-PA 179..360 172..355 232 28.6 Plus
CG11247-PB 522 CG11247-PB 179..360 172..355 232 28.6 Plus
crol-PG 878 CG14938-PG 293..511 136..354 231 27.2 Plus
Meics-PB 571 CG8474-PB 313..516 152..345 230 25.5 Plus
Meics-PA 583 CG8474-PA 325..528 152..345 230 25.5 Plus
crol-PD 878 CG14938-PD 293..511 136..354 230 26.8 Plus
Kr-h1-PA 791 CG45074-PA 208..358 192..343 230 34.4 Plus
Kr-h1-PB 845 CG45074-PB 262..412 192..343 230 34.4 Plus
crol-PF 907 CG14938-PF 384..552 166..337 229 29.7 Plus
CG42726-PA 441 CG42726-PA 103..269 173..342 228 29.8 Plus
crol-PB 891 CG14938-PB 384..551 166..337 227 28.5 Plus
crol-PI 962 CG14938-PI 384..551 166..337 227 28.5 Plus
crol-PE 962 CG14938-PE 384..551 166..337 227 28.5 Plus
crol-PA 962 CG14938-PA 384..551 166..337 227 28.5 Plus
Kr-PB 502 CG3340-PB 224..376 173..332 227 30 Plus
Kr-PA 502 CG3340-PA 224..376 173..332 227 30 Plus
CG2712-PA 501 CG2712-PA 310..485 169..347 226 28.3 Plus
crol-PG 878 CG14938-PG 447..619 173..345 225 29.4 Plus
crol-PF 907 CG14938-PF 476..648 173..345 225 29.4 Plus
crol-PD 878 CG14938-PD 447..619 173..345 225 29.4 Plus
crol-PC 756 CG14938-PC 185..345 173..337 225 28.5 Plus
crol-PC 756 CG14938-PC 325..497 173..345 225 29.4 Plus
crol-PB 891 CG14938-PB 356..523 168..337 225 32 Plus
crol-PI 962 CG14938-PI 356..523 168..337 225 32 Plus
crol-PI 962 CG14938-PI 531..703 173..345 225 29.4 Plus
crol-PE 962 CG14938-PE 356..523 168..337 225 32 Plus
crol-PE 962 CG14938-PE 531..703 173..345 225 29.4 Plus
crol-PA 962 CG14938-PA 356..523 168..337 225 32 Plus
crol-PA 962 CG14938-PA 531..703 173..345 225 29.4 Plus
CG9215-PA 560 CG9215-PA 296..453 191..351 225 31.7 Plus
CG8301-PA 607 CG8301-PA 377..595 150..347 225 25 Plus
cg-PK 665 CG8367-PK 94..334 89..337 225 27.1 Plus
cg-PN 686 CG8367-PN 128..349 109..337 225 26.8 Plus
CG4854-PA 319 CG4854-PA 141..314 141..314 224 26 Plus
Kr-h1-PA 791 CG45074-PA 238..429 166..354 224 29.6 Plus
Kr-h1-PB 845 CG45074-PB 292..483 166..354 224 29.6 Plus
Meics-PB 571 CG8474-PB 368..567 167..337 222 24.3 Plus
Meics-PA 583 CG8474-PA 380..579 167..337 222 24.3 Plus
CG31365-PA 639 CG31365-PA 406..614 126..333 222 26.2 Plus
CG2202-PA 889 CG2202-PA 600..755 173..333 222 29.2 Plus
CG2712-PA 501 CG2712-PA 255..456 142..347 221 25.6 Plus
CG6654-PA 639 CG6654-PA 360..518 173..337 220 31.7 Plus
pita-PB 623 CG3941-PB 200..388 142..337 220 30.1 Plus
pita-PA 683 CG3941-PA 260..448 142..337 220 30.1 Plus
CG7987-PB 1283 CG7987-PB 482..673 156..343 220 29.7 Plus
CG15436-PA 346 CG15436-PA 80..290 127..339 219 25.1 Plus
CG10366-PA 578 CG10366-PA 180..412 124..337 219 26.7 Plus
erm-PB 603 CG31670-PB 295..470 154..335 219 28.6 Plus
erm-PA 611 CG31670-PA 303..478 154..335 219 28.6 Plus
erm-PC 654 CG31670-PC 303..478 154..335 219 28.6 Plus
CG4854-PA 319 CG4854-PA 179..313 202..338 217 32.1 Plus
CG42726-PA 441 CG42726-PA 48..241 147..342 217 25.8 Plus
Neu2-PB 308 CG7204-PB 120..254 202..338 217 31.4 Plus
Neu2-PA 382 CG7204-PA 120..254 202..338 217 31.4 Plus
CG14710-PB 415 CG14710-PB 235..395 145..307 217 27.4 Plus
crol-PF 907 CG14938-PF 242..428 164..354 216 26.7 Plus
crol-PD 878 CG14938-PD 242..411 164..337 216 28.2 Plus
crol-PH 686 CG14938-PH 185..346 173..337 213 28.3 Plus
Clamp-PA 561 CG1832-PA 345..503 186..347 212 30.9 Plus
crol-PG 878 CG14938-PG 475..642 173..339 212 28.1 Plus
crol-PF 907 CG14938-PF 504..671 173..339 212 28.1 Plus
crol-PD 878 CG14938-PD 475..642 173..339 212 28.1 Plus
crol-PC 756 CG14938-PC 353..520 173..339 212 28.1 Plus
crol-PI 962 CG14938-PI 559..726 173..339 212 28.1 Plus
crol-PE 962 CG14938-PE 559..726 173..339 212 28.1 Plus
crol-PA 962 CG14938-PA 559..726 173..339 212 28.1 Plus
crol-PB 891 CG14938-PB 242..411 164..337 211 27.6 Plus
crol-PI 962 CG14938-PI 242..411 164..337 211 27.6 Plus
crol-PE 962 CG14938-PE 242..411 164..337 211 27.6 Plus
crol-PA 962 CG14938-PA 242..411 164..337 211 27.6 Plus
Clamp-PB 566 CG1832-PB 362..508 198..347 209 32.7 Plus
crol-PG 878 CG14938-PG 242..411 164..337 209 28.2 Plus
crol-PH 686 CG14938-PH 326..481 173..327 208 28.3 Plus
crol-PB 891 CG14938-PB 531..686 173..327 208 28.3 Plus
CG6654-PA 639 CG6654-PA 442..607 173..342 205 28.2 Plus
erm-PB 603 CG31670-PB 306..444 197..337 203 31.2 Plus
erm-PA 611 CG31670-PA 314..452 197..337 203 31.2 Plus
erm-PC 654 CG31670-PC 314..452 197..337 203 31.2 Plus
pita-PB 623 CG3941-PB 301..478 162..342 202 25.8 Plus
pita-PA 683 CG3941-PA 361..538 162..342 202 25.8 Plus
CG11247-PC 522 CG11247-PC 238..422 173..353 200 26.7 Plus
CG11247-PA 522 CG11247-PA 238..422 173..353 200 26.7 Plus
CG11247-PB 522 CG11247-PB 238..422 173..353 200 26.7 Plus
CG15436-PA 346 CG15436-PA 44..232 177..337 195 28.8 Plus
Kr-PB 502 CG3340-PB 218..353 197..334 193 28.3 Plus
Kr-PA 502 CG3340-PA 218..353 197..334 193 28.3 Plus
CG10366-PA 578 CG10366-PA 306..472 173..341 192 25.9 Plus
CG11247-PC 522 CG11247-PC 58..254 124..333 190 23.1 Plus
CG11247-PA 522 CG11247-PA 58..254 124..333 190 23.1 Plus
CG11247-PB 522 CG11247-PB 58..254 124..333 190 23.1 Plus
CG2202-PA 889 CG2202-PA 563..732 163..337 188 28.6 Plus
CG7987-PB 1283 CG7987-PB 368..583 129..338 186 28.3 Plus
crol-PH 686 CG14938-PH 179..290 225..337 185 32.7 Plus
Opbp-PA 562 CG30443-PA 295..492 167..345 184 23.6 Plus
CG10366-PA 578 CG10366-PA 23..387 2..339 184 23.6 Plus
CG8301-PA 607 CG8301-PA 154..383 132..333 183 25.8 Plus
CG11247-PC 522 CG11247-PC 95..200 231..337 178 29.9 Plus
CG11247-PA 522 CG11247-PA 95..200 231..337 178 29.9 Plus
CG11247-PB 522 CG11247-PB 95..200 231..337 178 29.9 Plus
su(Hw)-PC 941 CG8573-PC 290..470 171..345 177 27.2 Plus
su(Hw)-PB 941 CG8573-PB 290..470 171..345 177 27.2 Plus
su(Hw)-PA 941 CG8573-PA 290..470 171..345 177 27.2 Plus
Kr-PB 502 CG3340-PB 224..337 231..347 177 32.5 Plus
Kr-PA 502 CG3340-PA 224..337 231..347 177 32.5 Plus
ZIPIC-PA 457 CG7928-PA 70..367 44..342 173 25.6 Plus
crol-PC 756 CG14938-PC 179..289 225..337 171 31.9 Plus
Opbp-PA 562 CG30443-PA 104..330 151..347 170 21.5 Plus
CG15436-PA 346 CG15436-PA 199..341 160..305 170 26 Plus
CG7987-PB 1283 CG7987-PB 587..775 171..351 168 24.2 Plus
crol-PG 878 CG14938-PG 223..355 203..337 166 25.2 Plus
crol-PF 907 CG14938-PF 223..355 203..337 166 25.2 Plus
crol-PD 878 CG14938-PD 223..355 203..337 166 25.2 Plus
crol-PB 891 CG14938-PB 223..355 203..337 166 25.2 Plus
crol-PI 962 CG14938-PI 223..355 203..337 166 25.2 Plus
crol-PE 962 CG14938-PE 223..355 203..337 166 25.2 Plus
crol-PA 962 CG14938-PA 223..355 203..337 166 25.2 Plus
ZIPIC-PA 457 CG7928-PA 311..450 170..306 165 28.2 Plus
crol-PG 878 CG14938-PG 503..650 173..318 159 26.5 Plus
crol-PF 907 CG14938-PF 532..679 173..318 159 26.5 Plus
crol-PD 878 CG14938-PD 503..650 173..318 159 26.5 Plus
crol-PC 756 CG14938-PC 381..528 173..318 159 26.5 Plus
crol-PI 962 CG14938-PI 587..734 173..318 159 26.5 Plus
crol-PE 962 CG14938-PE 587..734 173..318 159 26.5 Plus
crol-PA 962 CG14938-PA 587..734 173..318 159 26.5 Plus
CG15269-PA 587 CG15269-PA 413..515 173..275 158 32.4 Plus
su(Hw)-PC 941 CG8573-PC 471..622 173..311 155 25.6 Plus
su(Hw)-PB 941 CG8573-PB 471..622 173..311 155 25.6 Plus
su(Hw)-PA 941 CG8573-PA 471..622 173..311 155 25.6 Plus
Neu2-PA 382 CG7204-PA 168..373 166..337 155 22.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:28:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24206-PA 346 GI24206-PA 1..343 1..351 1302 70.7 Plus
Dmoj\GI24208-PA 411 GI24208-PA 4..338 8..338 522 35.7 Plus
Dmoj\GI13302-PA 606 GI13302-PA 338..500 173..337 246 32.7 Plus
Dmoj\GI23393-PA 449 GI23393-PA 246..412 168..338 241 33.3 Plus
Dmoj\GI18627-PA 612 GI18627-PA 254..453 155..337 240 29.3 Plus
Dmoj\GI13302-PA 606 GI13302-PA 311..476 173..341 221 31 Plus
Dmoj\GI18627-PA 612 GI18627-PA 349..537 173..353 156 24.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:28:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14020-PA 393 GL14020-PA 1..239 1..226 722 63.7 Plus
Dper\GL14023-PA 421 GL14023-PA 4..348 8..338 525 36.4 Plus
Dper\GL14020-PA 393 GL14020-PA 328..393 278..343 326 90.9 Plus
Dper\GL26031-PA 597 GL26031-PA 343..505 173..337 250 32.7 Plus
Dper\GL26169-PA 557 GL26169-PA 339..519 159..338 238 29.7 Plus
Dper\GL13484-PA 436 GL13484-PA 199..399 136..338 232 30.7 Plus
Dper\GL26031-PA 597 GL26031-PA 316..481 173..341 221 31 Plus
Dper\GL26169-PA 557 GL26169-PA 357..495 202..343 197 33.1 Plus
Dper\GL26169-PA 557 GL26169-PA 386..532 173..319 191 30.7 Plus
Dper\GL26031-PA 597 GL26031-PA 429..531 173..275 153 32.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:28:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26935-PA 356 GA26935-PA 1..356 1..343 1351 74.2 Plus
Dpse\GA14741-PA 419 GA14741-PA 4..346 8..338 525 36.5 Plus
Dpse\GA13615-PA 599 GA13615-PA 345..507 173..337 250 32.7 Plus
Dpse\GA14887-PA 557 GA14887-PA 339..519 159..338 238 29.7 Plus
Dpse\GA20696-PA 436 GA20696-PA 199..399 136..338 232 30.7 Plus
Dpse\GA13615-PA 599 GA13615-PA 318..483 173..341 221 31 Plus
Dpse\GA14887-PA 557 GA14887-PA 357..495 202..343 197 33.1 Plus
Dpse\GA14887-PA 557 GA14887-PA 386..532 173..319 191 30.7 Plus
Dpse\GA13615-PA 599 GA13615-PA 431..533 173..275 153 32.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:28:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12853-PA 356 GM12853-PA 1..356 1..356 1868 98 Plus
Dsec\GM12855-PA 434 GM12855-PA 30..361 28..338 533 35.6 Plus
Dsec\GM15938-PA 643 GM15938-PA 383..545 173..337 247 32.1 Plus
Dsec\GM16114-PA 561 GM16114-PA 339..523 155..338 240 29.1 Plus
Dsec\GM23958-PA 377 GM23958-PA 223..359 168..307 221 29.3 Plus
Dsec\GM15938-PA 643 GM15938-PA 356..521 173..341 215 30.4 Plus
Dsec\GM16114-PA 561 GM16114-PA 345..499 186..343 198 31 Plus
Dsec\GM15938-PA 643 GM15938-PA 469..571 173..275 152 32.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:28:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Sry-beta-PA 356 GD21495-PA 1..356 1..356 1874 98.3 Plus
Dsim\Sry-delta-PA 300 GD21498-PA 63..227 173..338 474 51.2 Plus
Dsim\GD23994-PA 592 GD23994-PA 332..494 173..337 247 32.1 Plus
Dsim\GD17432-PA 450 GD17432-PA 191..413 116..338 244 31.7 Plus
Dsim\GD18768-PA 377 GD18768-PA 223..359 168..307 221 29.3 Plus
Dsim\GD23994-PA 592 GD23994-PA 305..470 173..341 216 30.4 Plus
Dsim\GD23994-PA 592 GD23994-PA 418..520 173..275 152 32.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:28:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Sry-beta-PA 346 GJ10775-PA 1..336 1..346 1341 73.4 Plus
Dvir\GJ10777-PA 412 GJ10777-PA 4..338 8..337 527 34.8 Plus
Dvir\GJ11932-PA 596 GJ11932-PA 336..498 173..337 245 32.7 Plus
Dvir\GJ10388-PA 435 GJ10388-PA 199..398 131..338 243 31.6 Plus
Dvir\GJ15143-PA 584 GJ15143-PA 366..546 159..338 237 29.7 Plus
Dvir\GJ11932-PA 596 GJ11932-PA 309..474 173..341 220 31 Plus
Dvir\GJ15143-PA 584 GJ15143-PA 363..522 181..343 196 30.7 Plus
Dvir\GJ15143-PA 584 GJ15143-PA 413..559 173..319 190 30.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:28:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13865-PA 402 GK13865-PA 1..383 1..342 1341 70.2 Plus
Dwil\GK13867-PA 427 GK13867-PA 4..374 8..354 526 34.5 Plus
Dwil\GK13423-PA 276 GK13423-PA 139..273 203..337 412 53.3 Plus
Dwil\GK18315-PA 593 GK18315-PA 340..502 173..337 247 32.7 Plus
Dwil\GK15349-PA 566 GK15349-PA 294..528 116..338 247 26.8 Plus
Dwil\GK18315-PA 593 GK18315-PA 313..478 173..341 221 31 Plus
Dwil\GK15349-PA 566 GK15349-PA 366..504 202..343 195 33.1 Plus
Dwil\GK18315-PA 593 GK18315-PA 426..528 173..275 150 32.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:28:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10851-PA 356 GE10851-PA 1..356 1..356 1873 97.8 Plus
Dyak\GE10853-PA 433 GE10853-PA 4..360 8..338 525 33.4 Plus
Dyak\GE20880-PA 596 GE20880-PA 335..497 173..337 246 32.1 Plus
Dyak\GE23423-PA 453 GE23423-PA 210..416 136..338 241 30.7 Plus
Dyak\GE12967-PA 561 GE12967-PA 339..523 155..338 241 29.1 Plus
Dyak\GE20880-PA 596 GE20880-PA 308..473 173..341 215 30.4 Plus
Dyak\GE12967-PA 561 GE12967-PA 361..499 202..343 197 33.1 Plus
Dyak\GE20880-PA 596 GE20880-PA 421..523 173..275 152 32.4 Plus

LD08529.hyp Sequence

Translation from 81 to 1151

> LD08529.hyp
MSSTRPFCFVCGKEKSVGVFQLIEGCIVPGTFKPIKDILKYFEKIINQRL
ELLPNSAACRDCLEYLFNYDRLVRNLSQVQRQIADALLGCRQVEGKAETK
QQAAKRARVQVPAFKIVQATALKEPERQPGEEDECEEFMKEEMLDEEFQF
SEPDDSMPSSEEEFFTETTEIPCHICGEMFSSQEVLERHIKADTCQKSEQ
ATCNVCGLKVKDDEVLDLHMNLHEGKTELECRYCDKKFSHKRNVLRHMEV
HWDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQFKTKRT
YKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKPESAEAKE
ATVTFF*

LD08529.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:58:04
Subject Length Description Subject Range Query Range Score Percent Strand
Sry-beta-PB 356 CG7938-PB 1..356 1..356 1928 100 Plus
Sry-beta-PA 356 CG7938-PA 1..356 1..356 1928 100 Plus
Sry-delta-PA 433 CG17958-PA 30..360 28..338 597 35.9 Plus
CG7928-PA 457 CG7928-PA 195..420 119..338 295 30.3 Plus
Opbp-PA 562 CG30443-PA 188..405 136..337 273 27.5 Plus
CG7928-PA 457 CG7928-PA 70..367 44..342 173 25.6 Plus
CG7928-PA 457 CG7928-PA 311..450 170..306 165 28.2 Plus