BDGP Sequence Production Resources |
Search the DGRC for LD08638
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 86 |
Well: | 38 |
Vector: | pBS SK- |
Associated Gene/Transcript | mre11-RA |
Protein status: | LD08638.pep: gold |
Preliminary Size: | 1994 |
Sequenced Size: | 1997 |
Gene | Date | Evidence |
---|---|---|
CG16928 | 2000-02-14 | Blastp of sequenced clone |
CG16928 | 2001-01-01 | Release 2 assignment |
CG16928 | 2003-01-01 | Sim4 clustering to Release 3 |
mre11 | 2008-04-29 | Release 5.5 accounting |
mre11 | 2008-08-15 | Release 5.9 accounting |
mre11 | 2008-12-18 | 5.12 accounting |
1997 bp (1997 high quality bases) assembled on 2000-02-14
GenBank Submission: AF132144
> LD08638.complete TGGCGAAATAGGGCGTAATATCTTATTTTGTGAATTTTTAAGTTGCCCAG TTAACCATGAATGGCACCACGACAGCAGAGCAGGATGCTGACAACGTGAT TCGCATCCTGGTGGCTACCGACAACCACCTGGGCTATGGCGAAAAAGACG CGGTGCGCGGCGAGGACAGTTTCACGGCCTTCGAGGAGATCCTGGAACTG GCGGTGTCCGAGGATGTGGACATGATTCTGCTGGGAGGTGACCTCTTCCA CGACGCCGTGCCCAGCCAGAATGCGTTGCACAAATGCATTGAGCTCCTGC GGCGCTACACATTCGGTGATCGTCCTGTTTCCCTGGAGATTCTCAGCGAC CAGGGGCAATGCTTCCACAATGCCGTTAACCAGTCGGTGAATTACGAGGA TCCCAATCTGAACATTGCCATTCCAGTATTCTCTATTCATGGCAATCACG ACGATCCCAGTGGCTTCGGTCGTTTAAGTTCTCTGGATTTGCTGAGCACC TCGGGACTGGTTAACTATTTTGGTCGGTGGACCGATCTAACCCAGGTGGA GATCAGCCCCGTCCTGATGCGCAAGGGAGAGAGCCAATTGGCTTTGTACG GACTTAGCCACATCCACGACGGCCGACTGGCAAGGCTTATCAAGGATTTT AAGGTGAAGTTTAACTGTCCCGAGAACGTTGCTAATGGCGAAGACGGTAA TGAGTCCAAAGAGGAGGAGGATTGGTTCCATCTGTTAGTGGTACATCAGA ACCGCGCCGATCGGGGACCAAAGAACTATCTACCTGAGGACCTGTTGCCA TCGTTTTTGCACCTGGTGATTTGGGGTCACGAACACGATTGCCGCATCGA GCCAGAGGAGAATGCCAAAAAGCGCTTCTATGTCTCTCAGCCGGGCTCTT CGGTGCCCACCTCCTTGTCCGAGGGTGAGGCCAAGAAAAAGCACGTCGGC CTGCTCGAGATCTACAAGGGAAAATTCAAGCTTAAGCCGCTTCCGCTGGA GACTGTGCGGCCTTTCGTCTATGAATCCGTCGTACTGGCCGACCATGCCG ACGAATTAGGCCTTGTCGAAGGTGATGCCTCTACCAAGGTTTTTAAATTC GCCCAGGAACGAGTGGAGGCAATGATCGAGCGGGCGGTAGCCCAACACAC CGGTCATCCTAAGCAGCCAACGCTACCGCTCATTCGGTTGCGTCTCCTCT ACACAGATGAGTCCTGCATGTTTAATGCGATTCGGTTTGGAGAGATGTTG AGCACTCGGGTGGCCAACGTTCAGGATGTGGTGCAGTTCAGTAAGGTGGT TAAGCGTACCAAAACGGAGGCTGTCAATCTGGACAAAGAGGCATTGCGAC GTGCACTGGAAGCGGATAATGCCACTCGCGTGGAGGAGTTAGTGGATCGA TATTTCGAAGAGGCCAAGTCGAATAAGCCTCTCAAGTTATTCCACTCAAA GGCTCTTGCAGAGATGACCTATCGACTGTTGGAGCAAAGGGATGCCGATG CAGCTGAAAATATTGTCAAGTTCTACAAGGAAAAGGCAGTTGATCACTTG ATGGAAGCAATGCCCAACGACGAGAACATCGATGAGGAGCTTGAAAGATT TAGGGCGCTTCACAAGCATGGGGATCTACTGAAAATGCTTGACACACAGG GCTTGAAGGTGAAGAAAGAAGAAAAGTCCATGTCTGTGTTGGGTAGCGAA GTGAACGTCTCCACTGCCCCCGCGACGGGACGAGGAGCTGCTAGGGGTCG TGGAACTGCACGAACTCGTGCAGGTGCCACAGCTGCCACACGTGGAAAGG GCCAGCTAGATGTGACAGTCAGTAGTACGCGAACTTCCGGCAGGCAACAA ACGCTCCTTAGTAGCCTTATGGGCTCTCGTAATACTGCCAGCTATGTTAT ATCGGATGATTCCGATTGATTTGAATTCCGGAGACCTTGTTTACCACGAA GTTTAATAAACAGCAGTTTTCCTTTTTACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mre11-RA | 2248 | mre11-RA | 151..2131 | 1..1981 | 9890 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 11281197..11282272 | 284..1359 | 5335 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 11282547..11282856 | 1520..1829 | 1550 | 100 | Plus |
chr2L | 23010047 | chr2L | 11280862..11281144 | 1..283 | 1400 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 11282330..11282494 | 1358..1522 | 825 | 100 | Plus |
chr2L | 23010047 | chr2L | 11282923..11283073 | 1829..1979 | 755 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11282459..11283534 | 284..1359 | 5365 | 99.9 | Plus |
2L | 23513712 | 2L | 11283809..11284118 | 1520..1829 | 1550 | 100 | Plus |
2L | 23513712 | 2L | 11282124..11282406 | 1..283 | 1415 | 100 | Plus |
2L | 23513712 | 2L | 11283592..11283756 | 1358..1522 | 825 | 100 | Plus |
2L | 23513712 | 2L | 11284185..11284337 | 1829..1981 | 765 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11282459..11283534 | 284..1359 | 5365 | 99.9 | Plus |
2L | 23513712 | 2L | 11283809..11284118 | 1520..1829 | 1550 | 100 | Plus |
2L | 23513712 | 2L | 11282124..11282406 | 1..283 | 1415 | 100 | Plus |
2L | 23513712 | 2L | 11283592..11283756 | 1358..1522 | 825 | 100 | Plus |
2L | 23513712 | 2L | 11284185..11284337 | 1829..1981 | 765 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 6521..6590 | 959..891 | 113 | 66.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 11280862..11281144 | 1..283 | 99 | -> | Plus |
chr2L | 11281197..11282271 | 284..1358 | 99 | -> | Plus |
chr2L | 11282331..11282491 | 1359..1519 | 100 | -> | Plus |
chr2L | 11282547..11282856 | 1520..1829 | 100 | -> | Plus |
chr2L | 11282924..11283073 | 1830..1979 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mre11-RA | 1..1863 | 57..1919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mre11-RA | 1..1863 | 57..1919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mre11-RA | 1..1863 | 57..1919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mre11-RA | 1..1863 | 57..1919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mre11-RA | 1..1863 | 57..1919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mre11-RA | 32..2010 | 1..1979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mre11-RA | 32..2010 | 1..1979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mre11-RA | 35..2013 | 1..1979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mre11-RA | 32..2010 | 1..1979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mre11-RA | 35..2013 | 1..1979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11284186..11284335 | 1830..1979 | 100 | Plus | |
2L | 11283593..11283753 | 1359..1519 | 100 | -> | Plus |
2L | 11283809..11284118 | 1520..1829 | 100 | -> | Plus |
2L | 11282124..11282406 | 1..283 | 100 | -> | Plus |
2L | 11282459..11283533 | 284..1358 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11284186..11284335 | 1830..1979 | 100 | Plus | |
2L | 11283593..11283753 | 1359..1519 | 100 | -> | Plus |
2L | 11283809..11284118 | 1520..1829 | 100 | -> | Plus |
2L | 11282124..11282406 | 1..283 | 100 | -> | Plus |
2L | 11282459..11283533 | 284..1358 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11284186..11284335 | 1830..1979 | 100 | Plus | |
2L | 11283593..11283753 | 1359..1519 | 100 | -> | Plus |
2L | 11283809..11284118 | 1520..1829 | 100 | -> | Plus |
2L | 11282124..11282406 | 1..283 | 100 | -> | Plus |
2L | 11282459..11283533 | 284..1358 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 11282124..11282406 | 1..283 | 100 | -> | Plus |
arm_2L | 11282459..11283533 | 284..1358 | 99 | -> | Plus |
arm_2L | 11283593..11283753 | 1359..1519 | 100 | -> | Plus |
arm_2L | 11283809..11284118 | 1520..1829 | 100 | -> | Plus |
arm_2L | 11284186..11284335 | 1830..1979 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11282124..11282406 | 1..283 | 100 | -> | Plus |
2L | 11282459..11283533 | 284..1358 | 99 | -> | Plus |
2L | 11283593..11283753 | 1359..1519 | 100 | -> | Plus |
2L | 11283809..11284118 | 1520..1829 | 100 | -> | Plus |
2L | 11284186..11284335 | 1830..1979 | 100 | Plus |
Translation from 56 to 1918
> LD08638.pep MNGTTTAEQDADNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAV SEDVDMILLGGDLFHDAVPSQNALHKCIELLRRYTFGDRPVSLEILSDQG QCFHNAVNQSVNYEDPNLNIAIPVFSIHGNHDDPSGFGRLSSLDLLSTSG LVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHDGRLARLIKDFKV KFNCPENVANGEDGNESKEEEDWFHLLVVHQNRADRGPKNYLPEDLLPSF LHLVIWGHEHDCRIEPEENAKKRFYVSQPGSSVPTSLSEGEAKKKHVGLL EIYKGKFKLKPLPLETVRPFVYESVVLADHADELGLVEGDASTKVFKFAQ ERVEAMIERAVAQHTGHPKQPTLPLIRLRLLYTDESCMFNAIRFGEMLST RVANVQDVVQFSKVVKRTKTEAVNLDKEALRRALEADNATRVEELVDRYF EEAKSNKPLKLFHSKALAEMTYRLLEQRDADAAENIVKFYKEKAVDHLME AMPNDENIDEELERFRALHKHGDLLKMLDTQGLKVKKEEKSMSVLGSEVN VSTAPATGRGAARGRGTARTRAGATAATRGKGQLDVTVSSTRTSGRQQTL LSSLMGSRNTASYVISDDSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14771-PA | 606 | GF14771-PA | 1..606 | 1..620 | 2335 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23718-PA | 620 | GG23718-PA | 1..620 | 1..620 | 3008 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13392-PA | 621 | GH13392-PA | 5..621 | 4..620 | 2207 | 66.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mre11-PA | 620 | CG16928-PA | 1..620 | 1..620 | 3180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20705-PA | 617 | GI20705-PA | 1..617 | 1..620 | 2228 | 67.5 | Plus |
Dmoj\GI20694-PA | 517 | GI20694-PA | 1..497 | 1..543 | 1588 | 57 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19555-PA | 621 | GL19555-PA | 1..621 | 1..620 | 2478 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14221-PA | 621 | GA14221-PA | 1..621 | 1..620 | 2458 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19007-PA | 620 | GM19007-PA | 1..620 | 1..620 | 3276 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23775-PA | 620 | GD23775-PA | 1..620 | 1..620 | 3271 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13289-PA | 623 | GJ13289-PA | 1..623 | 1..620 | 2173 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21058-PA | 619 | GK21058-PA | 1..619 | 1..620 | 2229 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18523-PA | 621 | GE18523-PA | 1..621 | 1..620 | 2981 | 93.9 | Plus |
Translation from 56 to 1918
> LD08638.hyp MNGTTTAEQDADNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAV SEDVDMILLGGDLFHDAVPSQNALHKCIELLRRYTFGDRPVSLEILSDQG QCFHNAVNQSVNYEDPNLNIAIPVFSIHGNHDDPSGFGRLSSLDLLSTSG LVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHDGRLARLIKDFKV KFNCPENVANGEDGNESKEEEDWFHLLVVHQNRADRGPKNYLPEDLLPSF LHLVIWGHEHDCRIEPEENAKKRFYVSQPGSSVPTSLSEGEAKKKHVGLL EIYKGKFKLKPLPLETVRPFVYESVVLADHADELGLVEGDASTKVFKFAQ ERVEAMIERAVAQHTGHPKQPTLPLIRLRLLYTDESCMFNAIRFGEMLST RVANVQDVVQFSKVVKRTKTEAVNLDKEALRRALEADNATRVEELVDRYF EEAKSNKPLKLFHSKALAEMTYRLLEQRDADAAENIVKFYKEKAVDHLME AMPNDENIDEELERFRALHKHGDLLKMLDTQGLKVKKEEKSMSVLGSEVN VSTAPATGRGAARGRGTARTRAGATAATRGKGQLDVTVSSTRTSGRQQTL LSSLMGSRNTASYVISDDSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mre11-PA | 620 | CG16928-PA | 1..620 | 1..620 | 3180 | 100 | Plus |