BDGP Sequence Production Resources |
Search the DGRC for LD08659
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 86 |
Well: | 59 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG3358-RE |
Protein status: | LD08659.pep: gold |
Preliminary Size: | 1165 |
Sequenced Size: | 969 |
Gene | Date | Evidence |
---|---|---|
CG3358 | 2001-01-01 | Release 2 assignment |
CG3358 | 2002-06-13 | Blastp of sequenced clone |
CG3358 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3358 | 2008-04-29 | Release 5.5 accounting |
CG3358 | 2008-08-15 | Release 5.9 accounting |
CG3358 | 2008-12-18 | 5.12 accounting |
969 bp (969 high quality bases) assembled on 2002-06-13
GenBank Submission: AY122155
> LD08659.complete GCTTGACTAGCTAACACCTGGCAATGCTCCACAGACATTGGGGCCAACCT GACGGACCCCATGTTCCAGGGCTGCTACGGCGGAACCCAGAAGCACGAGC CCGACCTGCACATCGTCTTGGAGCGCGCGTGGCAACAGGGACTGCAGAAA GTCATCGTTACCGCCGGCTGCCTGAAGGATGTGGATGAGGCACTGGAACT GGCCTCCAAGGATGAGCGCATCTACACGACAGTGGGAACACATCCCACCC GGTGCGAGGAATTCGTACCAGACCCAGAGGGCTACTATGACCAGTTGCGA TCCAGGATCAAGGCAAATCGAACCAAGGTGCGGGCCGTAGGAGAATGTGG TCTAGACTACGATCGCTTGCACTTCTGCGCCCAGGAAACCCAGCGTCTGT ACTTCGAGAAGCAGCTGGACCTAGCGGCCGAGTTCAAACTGCCTCTCTTT CTGCACATGAGAAATGCTGCCGAGGACTTCATGGGCATCCTGGAAAGAAA TCGGAACAAGATCGAGGAGTGCGGCGGCGGAGTGGTGCACAGCTTTACAG GAACTTTGGAGGAGGCCCAGCGCATCCTCGCCTTCGGCGGTCTCTACATA GGCTTCAATGGGTGCTCCCTAAAGACGGATGAAAACGCAGAAGTGGTGCG CAAGCTACCCAACGACAGGATAATGCTAGAAACCGACTGCCCGTGGTGTG GTATTCGACCCTCGCATGCTGGACACAAGCACGTGACCACCAAGTTTCCC ACCGTCAAGAAGAAAGAGAAATGGACAGCTGAATCCCTAATAGACGGACG CTGTGAGCCTTGCCAAATCAGCCAAGTTTTGGAGTCTATTGCCGGAATCA AACAAGAGCCTAAAGAACAGCTGGCTGCGTTATACTACCAAAACACATTG GACTTGTTCTTCGGCACAGGAGAGAGTAAAGAATAAAACAACATGCATTT AAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 2811270..2811877 | 214..821 | 3040 | 100 | Plus |
chr2R | 21145070 | chr2R | 2810837..2811050 | 1..214 | 1070 | 100 | Plus |
chr2R | 21145070 | chr2R | 2811942..2812072 | 820..950 | 655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 2810837..2811050 | 1..214 | 100 | -> | Plus |
chr2R | 2811271..2811877 | 215..821 | 100 | -> | Plus |
chr2R | 2811944..2812072 | 822..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3358-RC | 19..921 | 34..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3358-RC | 19..921 | 34..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3358-RE | 1..876 | 61..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3358-RC | 19..921 | 34..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3358-RE | 1..876 | 61..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3358-RA | 76..1025 | 1..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3358-RA | 77..1026 | 1..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3358-RE | 1..950 | 1..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3358-RA | 76..1025 | 1..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3358-RE | 1..950 | 1..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6923446..6923659 | 1..214 | 100 | -> | Plus |
2R | 6924553..6924681 | 822..950 | 100 | Plus | |
2R | 6923880..6924486 | 215..821 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6923446..6923659 | 1..214 | 100 | -> | Plus |
2R | 6924553..6924681 | 822..950 | 100 | Plus | |
2R | 6923880..6924486 | 215..821 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6923446..6923659 | 1..214 | 100 | -> | Plus |
2R | 6924553..6924681 | 822..950 | 100 | Plus | |
2R | 6923880..6924486 | 215..821 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 2810951..2811164 | 1..214 | 100 | -> | Plus |
arm_2R | 2811385..2811991 | 215..821 | 100 | -> | Plus |
arm_2R | 2812058..2812186 | 822..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6924645..6924858 | 1..214 | 100 | -> | Plus |
2R | 6925079..6925685 | 215..821 | 100 | -> | Plus |
2R | 6925752..6925880 | 822..950 | 100 | Plus |
Translation from 60 to 935
> LD08659.pep MFQGCYGGTQKHEPDLHIVLERAWQQGLQKVIVTAGCLKDVDEALELASK DERIYTTVGTHPTRCEEFVPDPEGYYDQLRSRIKANRTKVRAVGECGLDY DRLHFCAQETQRLYFEKQLDLAAEFKLPLFLHMRNAAEDFMGILERNRNK IEECGGGVVHSFTGTLEEAQRILAFGGLYIGFNGCSLKTDENAEVVRKLP NDRIMLETDCPWCGIRPSHAGHKHVTTKFPTVKKKEKWTAESLIDGRCEP CQISQVLESIAGIKQEPKEQLAALYYQNTLDLFFGTGESKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13149-PA | 305 | GF13149-PA | 16..299 | 1..284 | 1358 | 86.3 | Plus |
Dana\GF17261-PA | 318 | GF17261-PA | 40..315 | 4..283 | 294 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23234-PA | 347 | GG23234-PA | 60..347 | 1..288 | 1411 | 89.6 | Plus |
Dere\GG14738-PA | 319 | GG14738-PA | 41..316 | 4..283 | 286 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22015-PA | 273 | GH22015-PA | 16..269 | 1..284 | 1093 | 72.9 | Plus |
Dgri\GH18916-PA | 326 | GH18916-PA | 48..323 | 4..283 | 284 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3358-PG | 291 | CG3358-PG | 1..291 | 1..291 | 1559 | 100 | Plus |
CG3358-PF | 291 | CG3358-PF | 1..291 | 1..291 | 1559 | 100 | Plus |
CG3358-PE | 291 | CG3358-PE | 1..291 | 1..291 | 1559 | 100 | Plus |
CG3308-PA | 319 | CG3308-PA | 47..316 | 10..283 | 272 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19721-PA | 303 | GI19721-PA | 16..299 | 1..284 | 1257 | 79.9 | Plus |
Dmoj\GI10834-PA | 313 | GI10834-PA | 35..310 | 4..283 | 287 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11128-PA | 293 | GL11128-PA | 1..291 | 1..290 | 1333 | 82.5 | Plus |
Dper\GL15649-PA | 185 | GL15649-PA | 1..183 | 109..290 | 846 | 84.7 | Plus |
Dper\GL27162-PA | 321 | GL27162-PA | 43..318 | 4..283 | 287 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17403-PA | 293 | GA17403-PA | 1..291 | 1..290 | 1345 | 83.5 | Plus |
Dpse\GA17263-PA | 321 | GA17263-PA | 43..318 | 4..283 | 288 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20907-PA | 306 | GM20907-PA | 16..306 | 1..291 | 1493 | 94.8 | Plus |
Dsec\GM15087-PA | 310 | GM15087-PA | 41..301 | 4..267 | 268 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10435-PA | 306 | GD10435-PA | 16..306 | 1..291 | 1495 | 95.2 | Plus |
Dsim\GD19994-PA | 264 | GD19994-PA | 1..261 | 19..283 | 273 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17566-PA | 303 | GJ17566-PA | 16..299 | 1..284 | 1272 | 81 | Plus |
Dvir\GJ14441-PA | 324 | GJ14441-PA | 46..321 | 4..283 | 281 | 30.8 | Plus |
Translation from 60 to 935
> LD08659.hyp MFQGCYGGTQKHEPDLHIVLERAWQQGLQKVIVTAGCLKDVDEALELASK DERIYTTVGTHPTRCEEFVPDPEGYYDQLRSRIKANRTKVRAVGECGLDY DRLHFCAQETQRLYFEKQLDLAAEFKLPLFLHMRNAAEDFMGILERNRNK IEECGGGVVHSFTGTLEEAQRILAFGGLYIGFNGCSLKTDENAEVVRKLP NDRIMLETDCPWCGIRPSHAGHKHVTTKFPTVKKKEKWTAESLIDGRCEP CQISQVLESIAGIKQEPKEQLAALYYQNTLDLFFGTGESKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3358-PG | 291 | CG3358-PG | 1..291 | 1..291 | 1559 | 100 | Plus |
CG3358-PF | 291 | CG3358-PF | 1..291 | 1..291 | 1559 | 100 | Plus |
CG3358-PE | 291 | CG3358-PE | 1..291 | 1..291 | 1559 | 100 | Plus |
CG3308-PA | 319 | CG3308-PA | 47..316 | 10..283 | 272 | 31.4 | Plus |