BDGP Sequence Production Resources |
Search the DGRC for LD08717
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 87 |
Well: | 17 |
Vector: | pBS SK- |
Associated Gene/Transcript | Prosbeta5-RA |
Protein status: | LD08717.pep: gold |
Preliminary Size: | 1304 |
Sequenced Size: | 1136 |
Gene | Date | Evidence |
---|---|---|
CG12323 | 2001-01-01 | Release 2 assignment |
CG12323 | 2001-11-29 | Blastp of sequenced clone |
CG12323 | 2003-01-01 | Sim4 clustering to Release 3 |
Prosbeta5 | 2008-04-29 | Release 5.5 accounting |
Prosbeta5 | 2008-08-15 | Release 5.9 accounting |
Prosbeta5 | 2008-12-18 | 5.12 accounting |
1136 bp (1136 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069381
> LD08717.complete TAGGCAACGAATTTTGTTTGTCATCGGCATTTCGCATTCAACGTTTCCAA TTGTTTTTTAAGGAGCTTTAAGAATGGCTTTAGCTGAAATCTGCAAGATA TCGAATGCTCCGTACATGCGGCCCAATGCCTGGTCATCGGCGGATGTGGA GGAAGAGCAAAAAGGGCTTATGTGCAATCTGGCCAATCCCTACACACTGG CTGCTCCGCCATTCGAGAACCCCCTGCACAACCTTAATCAGATCCAGGCC AATGGCGACAAGACCGGCGTCAAAATCAACTTCGATCACGGCACCACAAC GTTGGGCTTCAAGTTCAAGGGCGGCGTTCTCCTGGCAGTCGATTCCCGTG CCACGGGTGGATCGTACATTGGCTCCCAGTCGATGAAGAAGATCGTGGAG ATCAATCAGTTCATGCTGGGCACCTTGGCCGGTGGCGCAGCCGATTGCGT TTACTGGGACAGGGTCCTTTCGAAGGAATGCCGCCTTCACGAGCTTCGAA ACAAGGAACGCATCTCGGTGGCCGCCGCCAGCAAGATAATGGCCAACATT GCCCACGAATACAAGGGAATGGGTCTGAGCATGGGCATGATGCTGGCCGG TTACGATAAGCGTGGTCCAGGCCTCTACTATGTGGACTCCGAGGGATCTC GCACGCCTGGCAATTTGTTCTCTGTTGGTAGTGGATCGCTGTACGCCTAC GGTGTCCTGGACTCTGGCTATCATTGGGACCTGGAGGACAAGGAGGCCCA GGAGCTGGGACGTCGCGCCATCTACCATGCCACCTTCAGGGATGCCTACT CCGGTGGTATCATTCGCGTGTATCACATTAAGGAGGACGGCTGGGTAAAC ATCTCCAACACCGACTGCATGGAGCTGCACTACATGTACCAGGAGCAGTT GAAGCAGCAGGCCGCTAAGTAGAGTTTTGATTAAGGGAATATAAGATATT CAGTTTGTATACGTTTGAATTTCTTGGAATAAATAAACGTGCTAGAGACT ATGTTTTGTGTATAATTGATTGGGCTAATTTGTTTTGCTTTTCATAGGTT TATTACTATAAATGTAGTTGTATGTATGTAATGTATTTTTGGTAAATATA ACAAGTACGCATATATTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosbeta5-RA | 1199 | Prosbeta5-RA | 81..1199 | 1..1119 | 5595 | 100 | Plus |
Prosbeta5-RB | 1126 | Prosbeta5-RB | 70..1126 | 63..1119 | 5285 | 100 | Plus |
Prosbeta5R-RA | 1129 | Prosbeta5R-RA | 392..523 | 364..495 | 210 | 77.2 | Plus |
Prosbeta5R-RA | 1129 | Prosbeta5R-RA | 588..628 | 560..600 | 145 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 6707819..6708715 | 221..1117 | 4470 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 6707537..6707756 | 1..220 | 1100 | 100 | Plus |
chr2R | 21145070 | chr2R | 19195520..19195756 | 600..364 | 255 | 73.8 | Minus |
chr2L | 23010047 | chr2L | 17989603..17989648 | 557..602 | 185 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 10820282..10821180 | 221..1119 | 4495 | 100 | Plus |
2R | 25286936 | 2R | 10820000..10820219 | 1..220 | 1100 | 100 | Plus |
2R | 25286936 | 2R | 23309152..23309388 | 600..364 | 255 | 73.8 | Minus |
2L | 23513712 | 2L | 17990976..17991021 | 557..602 | 185 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 10821481..10822379 | 221..1119 | 4495 | 100 | Plus |
2R | 25260384 | 2R | 10821199..10821418 | 1..220 | 1100 | 100 | Plus |
2R | 25260384 | 2R | 23310456..23310587 | 495..364 | 210 | 77.2 | Minus |
2R | 25260384 | 2R | 23310351..23310391 | 600..560 | 145 | 90.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 6707537..6707756 | 1..220 | 100 | -> | Plus |
chr2R | 6707819..6708715 | 221..1117 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta5-RA | 1..849 | 74..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta5-RA | 1..849 | 74..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta5-RB | 1..849 | 74..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta5-RA | 1..849 | 74..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta5-RB | 1..849 | 74..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta5-RA | 20..1136 | 1..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta5-RA | 20..1136 | 1..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta5-RA | 23..1139 | 1..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta5-RA | 20..1136 | 1..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta5-RA | 23..1139 | 1..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10820000..10820219 | 1..220 | 100 | -> | Plus |
2R | 10820282..10821178 | 221..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10820000..10820219 | 1..220 | 100 | -> | Plus |
2R | 10820282..10821178 | 221..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10820000..10820219 | 1..220 | 100 | -> | Plus |
2R | 10820282..10821178 | 221..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 6707505..6707724 | 1..220 | 100 | -> | Plus |
arm_2R | 6707787..6708683 | 221..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10821199..10821418 | 1..220 | 100 | -> | Plus |
2R | 10821481..10822377 | 221..1117 | 100 | Plus |
Translation from 73 to 921
> LD08717.pep MALAEICKISNAPYMRPNAWSSADVEEEQKGLMCNLANPYTLAAPPFENP LHNLNQIQANGDKTGVKINFDHGTTTLGFKFKGGVLLAVDSRATGGSYIG SQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVA AASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFS VGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVY HIKEDGWVNISNTDCMELHYMYQEQLKQQAAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13778-PA | 284 | GF13778-PA | 1..275 | 1..275 | 1322 | 88 | Plus |
Dana\GF13303-PA | 314 | GF13303-PA | 1..270 | 1..272 | 900 | 61.5 | Plus |
Dana\GF14807-PA | 308 | GF14807-PA | 1..267 | 1..269 | 713 | 49.6 | Plus |
Dana\GF21399-PA | 293 | GF21399-PA | 1..275 | 1..277 | 708 | 50.2 | Plus |
Dana\GF23798-PA | 272 | GF23798-PA | 43..219 | 77..254 | 221 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20151-PA | 282 | GG20151-PA | 1..269 | 1..269 | 1402 | 95.9 | Plus |
Dere\GG20051-PA | 390 | GG20051-PA | 1..270 | 1..272 | 902 | 61.5 | Plus |
Dere\GG21097-PA | 245 | GG21097-PA | 1..234 | 36..272 | 760 | 56.1 | Plus |
Dere\GG18789-PA | 307 | GG18789-PA | 48..230 | 73..256 | 223 | 31 | Plus |
Dere\GG15711-PA | 272 | GG15711-PA | 43..219 | 77..254 | 222 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20460-PA | 280 | GH20460-PA | 1..269 | 1..269 | 1289 | 85.9 | Plus |
Dgri\GH23050-PA | 315 | GH23050-PA | 1..270 | 1..272 | 876 | 59.6 | Plus |
Dgri\GH14538-PA | 275 | GH14538-PA | 1..259 | 1..275 | 473 | 40.9 | Plus |
Dgri\GH16666-PA | 272 | GH16666-PA | 43..227 | 77..262 | 228 | 31.7 | Plus |
Dgri\GH12772-PA | 300 | GH12772-PA | 29..226 | 56..256 | 216 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosbeta5-PA | 282 | CG12323-PA | 1..282 | 1..282 | 1493 | 100 | Plus |
Prosbeta5-PB | 282 | CG12323-PB | 1..282 | 1..282 | 1493 | 100 | Plus |
Prosbeta5R1-PA | 315 | CG9868-PA | 1..270 | 1..272 | 882 | 61.2 | Plus |
Prosbeta5R2-PB | 279 | CG31742-PB | 1..277 | 1..279 | 775 | 51.8 | Plus |
Prosbeta5R2-PA | 279 | CG31742-PA | 1..277 | 1..279 | 775 | 51.8 | Plus |
Prosbeta2-PA | 272 | CG3329-PA | 39..219 | 73..254 | 237 | 33 | Plus |
Prosbeta2R1-PA | 307 | CG18341-PA | 48..232 | 73..258 | 224 | 32.3 | Plus |
Prosbeta1-PA | 224 | CG8392-PA | 15..198 | 73..256 | 215 | 28.1 | Plus |
Prosbeta2R2-PA | 322 | CG12161-PA | 26..231 | 47..255 | 210 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18886-PA | 279 | GI18886-PA | 1..275 | 1..275 | 1327 | 86.9 | Plus |
Dmoj\GI21121-PA | 314 | GI21121-PA | 1..273 | 1..275 | 892 | 61.4 | Plus |
Dmoj\GI10892-PA | 322 | GI10892-PA | 1..273 | 1..273 | 757 | 49.3 | Plus |
Dmoj\GI11352-PA | 270 | GI11352-PA | 39..227 | 73..262 | 244 | 32.1 | Plus |
Dmoj\GI20414-PA | 222 | GI20414-PA | 15..198 | 73..256 | 215 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11283-PA | 305 | GL11283-PA | 1..254 | 1..272 | 818 | 58.6 | Plus |
Dper\GL14524-PA | 270 | GL14524-PA | 1..262 | 1..272 | 573 | 41.5 | Plus |
Dper\GL21838-PA | 312 | GL21838-PA | 49..235 | 73..260 | 229 | 30.3 | Plus |
Dper\GL24711-PA | 272 | GL24711-PA | 43..220 | 77..255 | 228 | 32.4 | Plus |
Dper\GL17309-PA | 991 | GL17309-PA | 1..62 | 1..62 | 223 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11556-PA | 279 | GA11556-PA | 1..279 | 1..279 | 1310 | 84.6 | Plus |
Dpse\GA22086-PA | 321 | GA22086-PA | 1..270 | 1..272 | 889 | 61.5 | Plus |
Dpse\GA25177-PA | 270 | GA25177-PA | 1..263 | 1..273 | 575 | 41.7 | Plus |
Dpse\GA26418-PA | 312 | GA26418-PA | 49..235 | 73..260 | 231 | 30.3 | Plus |
Dpse\GA17382-PA | 272 | GA17382-PA | 43..220 | 77..255 | 224 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21240-PA | 282 | GM21240-PA | 1..282 | 1..282 | 1494 | 97.5 | Plus |
Dsec\GM15565-PA | 315 | GM15565-PA | 1..270 | 1..272 | 891 | 60.8 | Plus |
Dsec\GM17255-PA | 279 | GM17255-PA | 1..278 | 1..280 | 791 | 50.9 | Plus |
Dsec\GM12440-PA | 307 | GM12440-PA | 48..232 | 73..258 | 231 | 31.7 | Plus |
Dsec\GM25498-PA | 272 | GM25498-PA | 43..219 | 77..254 | 224 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10758-PA | 282 | GD10758-PA | 1..282 | 1..282 | 1496 | 97.9 | Plus |
Dsim\GD24120-PA | 279 | GD24120-PA | 1..278 | 1..280 | 805 | 52.3 | Plus |
Dsim\GD16756-PA | 307 | GD16756-PA | 48..232 | 73..258 | 229 | 31.2 | Plus |
Dsim\GD14518-PA | 272 | GD14518-PA | 43..219 | 77..254 | 223 | 32 | Plus |
Dsim\GD19639-PA | 322 | GD19639-PA | 26..231 | 47..255 | 205 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21921-PA | 279 | GJ21921-PA | 1..279 | 1..279 | 1305 | 84.2 | Plus |
Dvir\GJ20967-PA | 312 | GJ20967-PA | 1..276 | 1..277 | 861 | 59 | Plus |
Dvir\GJ16567-PA | 328 | GJ16567-PA | 1..276 | 1..278 | 740 | 49.5 | Plus |
Dvir\GJ11606-PA | 270 | GJ11606-PA | 41..218 | 77..255 | 228 | 32.4 | Plus |
Dvir\GJ16628-PA | 304 | GJ16628-PA | 21..226 | 47..256 | 214 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15836-PA | 283 | GK15836-PA | 1..281 | 1..281 | 1352 | 85.8 | Plus |
Dwil\GK19557-PA | 362 | GK19557-PA | 1..277 | 1..279 | 902 | 60 | Plus |
Dwil\GK18059-PA | 311 | GK18059-PA | 1..270 | 1..273 | 667 | 48.7 | Plus |
Dwil\GK25153-PA | 353 | GK25153-PA | 50..224 | 73..247 | 253 | 34.7 | Plus |
Dwil\GK10550-PA | 272 | GK10550-PA | 39..220 | 73..255 | 235 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Prosbeta5-PA | 282 | GE12841-PA | 1..269 | 1..269 | 1403 | 95.9 | Plus |
Dyak\GE11586-PA | 315 | GE11586-PA | 1..270 | 1..272 | 901 | 61.5 | Plus |
Dyak\GE12802-PA | 246 | GE12802-PA | 1..243 | 36..281 | 767 | 55.3 | Plus |
Dyak\GE25306-PA | 324 | GE25306-PA | 26..231 | 47..255 | 229 | 29.5 | Plus |
Dyak\GE22042-PA | 272 | GE22042-PA | 43..219 | 77..254 | 221 | 32 | Plus |
Translation from 73 to 921
> LD08717.hyp MALAEICKISNAPYMRPNAWSSADVEEEQKGLMCNLANPYTLAAPPFENP LHNLNQIQANGDKTGVKINFDHGTTTLGFKFKGGVLLAVDSRATGGSYIG SQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVA AASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFS VGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVY HIKEDGWVNISNTDCMELHYMYQEQLKQQAAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosbeta5-PA | 282 | CG12323-PA | 1..282 | 1..282 | 1493 | 100 | Plus |
Prosbeta5-PB | 282 | CG12323-PB | 1..282 | 1..282 | 1493 | 100 | Plus |
Prosbeta5R1-PA | 315 | CG9868-PA | 1..270 | 1..272 | 882 | 61.2 | Plus |
Prosbeta5R2-PB | 279 | CG31742-PB | 1..277 | 1..279 | 775 | 51.8 | Plus |
Prosbeta5R2-PA | 279 | CG31742-PA | 1..277 | 1..279 | 775 | 51.8 | Plus |