BDGP Sequence Production Resources |
Search the DGRC for LD08718
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 87 |
Well: | 18 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG10889-RA |
Protein status: | LD08718.pep: gold |
Preliminary Size: | 2106 |
Sequenced Size: | 2149 |
Gene | Date | Evidence |
---|---|---|
CG10889 | 2001-01-01 | Release 2 assignment |
CG10889 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10889 | 2003-01-13 | Blastp of sequenced clone |
CG10889 | 2008-04-29 | Release 5.5 accounting |
CG10889 | 2008-08-15 | Release 5.9 accounting |
CG10889 | 2008-12-18 | 5.12 accounting |
2149 bp (2149 high quality bases) assembled on 2003-01-13
GenBank Submission: AY069382
> LD08718.complete CTTGCTGCAGAGAACAGCTAAAAACGCAAGGAAGCGGGCAAAACAAACAA CAGGAGCGAGCAGCCGAGGGAAAGCCAGCCGCTGGTCAGTTAGATGCGCA TCAAGATGGATTGCGAAGTGCAGGAGCAACACAAACAGCAGCAACAACAA CAGCAGGTCCACCAGCAACAACAAAAACACGGCAGCAGCAACAAGTTGCC AGTGAGAAAGCAGGAAAGCTGCTCCGACGACGATGAGAGCCAGAGTCCCA GCCGCACAACGGAGCGCCAGAACCTGGAGTTCGCCAAAAAGCTAGGCTAC AGCGAACAGTCCATCCATTCGGCGCTGACGCGCCTCGGCTCGGAAGCCAA GCAGAACGAGCTGCTGGCGGAGCTGATCAAGCTGACGGCCGATGCACCGC GGCCCGCCCACATAGGCGGAGGCGGCAGTCCATCCAGCATGACCAGCACT CTGTCCTCCCCGACCGGCGGTAGCAACAGCTCTGGCTTGAGACACATCGT AATCGATGGCAGTAATGTCGCCCTTTCTCACGGCAACAATCTAGTATTCT CTTGCCGCGGCATTCGCATCTGTGTGGACTGGTTCCGGCAGCGTGGCCAT CGCGACATCACCGCTTTCGTGCCCAACTGGCGCAAGGAGATGGCGAACAA CAACATAGCCGACCAGGAGCTGCTCTACGAGCTGGAGCACGAAAGATACC TGGTGTTCACGCCATCGCGACATCTGGATGGCAAGCGTGTGTCCTGCTAC GATGATCGCTTCATACTCAAGCTGGCAGTGGAAACTGACGGCATTGTAGT CTCCAACGACAACTACAGGGATCTGATCCTGGAGAGTAACGAGTTTAGGC GCGTGGTGCAGGAGCGCCTGTTGATGTACTCTTTTGTAAATGACATCTTC ATGCCACCCGACGATCCGCTGGGCAGATCGGGTCCAAATCTGGACCTCTT CCTGTGCTCGCAGACGCAGCAGAAAATGGCGGATGCGCAGCAGTTGTGTC CGTACGGCAAGAAGTGCACCTACGGCCAGAAGTGCAAGTTCCGGCATCAC AATCAGGCGCCACTGCTGCAGCGCCTCCCGCTGCAGGCCTCCCACAGCGC GCCCCTGCACACGAACGGTGGCCAACAGTTGGTCAGTCCGGGTGGCAATA ATAACAATGTTAAGATCAACTCACTGATTAGCCGGGAGCCGCTGGGGCGC ACCAAGTCAAATACCATCGAGCAGGTATGTCAGGGCTTCTCCGCTCAAAT GGATCTTTCAGAGGGTGCCGTGGAATCCAGCCAGCCCAATCGCCACAAGA AGCTGCAGCGCCAACAACCGCCGCCCGCCTACCGCCTGCTGGTGCCCACC TACAGTGCTCCCCTCCAGCAACAACAACACCAGGCACAGCAGCAGCATCA ACAGTCCAACTCCAGCACCAACTATCACCACCAGTATCTGACGCGCACGC CATCCGCCCCGGTCACGGATCAGGGACTGGGTCTGCCACTGCCCGCTCAC AACTTCGCCCATCTGTCTGCCTCCGATTCGCGCATCAACGAGGAGCTGCA CGCCTCGCAGCAGCTTCCGCGGGAGGAGCAGCGCCGATTGCTGCGCTATC ACCTGGGCAGCCTTTTCCCACCGCACCAGGTGCATGCCGTACTGCAGCTC TATCCGGAGGAGACCGACGCCAAGACCATATGCGCGGCTATTCTTAATTT ATTTCCGCATAATTAGGCTAGGCTTAAATTTCATCAATATAATTAGATGT GTAATTACACGCGTGTTTCTGCTTAAAGTGTAAAGTGTCGCTTTGGGACG ACGTGGAGTCCTCGCTCGAAATTTACATATCCAGGCCAACGATGTTGGCC GTGTCGTAGGACACCAGCCCGGCTACGGATTCCCGTGCGGACTGGCCGCG CCTCTCGTGGATGACCCGGTGGTTACGCAGTTTGTACGCCTGCGGGAATC CCTTGCCGCACACATCGCAGCTAAAGAGAGAGAGCAAACGTGTTTTAAAT TGATTAGAATCCTTGATTAATTTATGTCTTCCTTATAACTTATAATATTT AAACACTAATACTTCATTCCCTGTTTATCTAATGTTATTTACGCCTCAGG CACCTAATAAACAATCAACTAAACTCAAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 15857812..15859944 | 2131..1 | 10525 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 20033880..20036011 | 2132..1 | 10660 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 19774711..19776842 | 2132..1 | 10660 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1516..1591 | 1364..1442 | 180 | 73.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6857 | 1301..1438 | 175 | 63.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2466 | 1282..1444 | 171 | 60 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1073..1163 | 1366..1457 | 169 | 70.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2406 | 1366..1438 | 166 | 73 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6933 | 1282..1478 | 166 | 58.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2388..2551 | 1278..1435 | 165 | 61.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2251..2394 | 1298..1438 | 162 | 62.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6917 | 1282..1438 | 162 | 60 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6805 | 1366..1440 | 160 | 72 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6838 | 1366..1440 | 160 | 72 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6806..6946 | 1294..1424 | 158 | 63.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6794 | 1362..1438 | 152 | 70.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6819 | 1366..1433 | 152 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6746..6817 | 1366..1440 | 151 | 70.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1524..1606 | 1347..1437 | 148 | 69.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2328..2502 | 1278..1457 | 148 | 59.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2439..2511 | 1366..1444 | 146 | 70.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1115..1152 | 1366..1403 | 145 | 86.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6851 | 1366..1444 | 144 | 68.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2376..2538 | 1278..1444 | 139 | 57.7 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7964..8076 | 1366..1484 | 139 | 61.3 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 9408..9520 | 1366..1484 | 139 | 61.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6836..6900 | 1366..1433 | 134 | 70.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2343..2417 | 1366..1440 | 131 | 67.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1060..1125 | 1365..1433 | 130 | 69.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2811..2868 | 1366..1422 | 125 | 75 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2613..2689 | 1363..1442 | 123 | 67.1 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 522..599 | 1360..1437 | 120 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1554..1630 | 1363..1437 | 119 | 63.6 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 6059..6097 | 1362..1400 | 114 | 76.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15859826..15859944 | 1..119 | 99 | Minus | |
chr3R | 15857812..15859751 | 194..2131 | 99 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10889-RA | 1..1623 | 94..1716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10889-RA | 1..1623 | 94..1716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10889-RA | 1..1623 | 94..1716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10889-RA | 1..1623 | 94..1716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10889-RA | 1..1623 | 94..1716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10889-RA | 45..2175 | 1..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10889-RA | 45..2175 | 1..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10889-RA | 45..2175 | 1..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10889-RA | 45..2175 | 1..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10889-RA | 46..2176 | 1..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20033881..20036011 | 1..2131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20033881..20036011 | 1..2131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20033881..20036011 | 1..2131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15859603..15861733 | 1..2131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19774712..19776842 | 1..2131 | 100 | Minus |
Translation from 93 to 1715
> LD08718.pep MRIKMDCEVQEQHKQQQQQQQVHQQQQKHGSSNKLPVRKQESCSDDDESQ SPSRTTERQNLEFAKKLGYSEQSIHSALTRLGSEAKQNELLAELIKLTAD APRPAHIGGGGSPSSMTSTLSSPTGGSNSSGLRHIVIDGSNVALSHGNNL VFSCRGIRICVDWFRQRGHRDITAFVPNWRKEMANNNIADQELLYELEHE RYLVFTPSRHLDGKRVSCYDDRFILKLAVETDGIVVSNDNYRDLILESNE FRRVVQERLLMYSFVNDIFMPPDDPLGRSGPNLDLFLCSQTQQKMADAQQ LCPYGKKCTYGQKCKFRHHNQAPLLQRLPLQASHSAPLHTNGGQQLVSPG GNNNNVKINSLISREPLGRTKSNTIEQVCQGFSAQMDLSEGAVESSQPNR HKKLQRQQPPPAYRLLVPTYSAPLQQQQHQAQQQHQQSNSSTNYHHQYLT RTPSAPVTDQGLGLPLPAHNFAHLSASDSRINEELHASQQLPREEQRRLL RYHLGSLFPPHQVHAVLQLYPEETDAKTICAAILNLFPHN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17338-PA | 524 | GF17338-PA | 1..524 | 1..540 | 2246 | 82.8 | Plus |
Dana\GF12995-PA | 420 | GF12995-PA | 241..418 | 107..287 | 398 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15642-PA | 537 | GG15642-PA | 1..537 | 1..540 | 2493 | 93.7 | Plus |
Dere\GG22993-PA | 428 | GG22993-PA | 275..426 | 133..287 | 395 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23228-PA | 548 | GH23228-PA | 1..548 | 1..540 | 1794 | 68.5 | Plus |
Dgri\GH20323-PA | 392 | GH20323-PA | 108..390 | 6..287 | 360 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10889-PA | 540 | CG10889-PA | 1..540 | 1..540 | 2846 | 100 | Plus |
CG42360-PA | 496 | CG42360-PA | 343..494 | 133..287 | 371 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10314-PA | 549 | GI10314-PA | 1..549 | 1..540 | 1747 | 69.3 | Plus |
Dmoj\GI19995-PA | 352 | GI19995-PA | 199..346 | 133..283 | 363 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12518-PA | 531 | GL12518-PA | 43..531 | 45..540 | 2108 | 83.1 | Plus |
Dper\GL10231-PA | 383 | GL10231-PA | 221..381 | 124..287 | 389 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10620-PA | 531 | GA10620-PA | 43..531 | 45..540 | 2101 | 82.7 | Plus |
Dpse\GA24129-PA | 446 | GA24129-PA | 284..444 | 124..287 | 391 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17697-PA | 534 | GM17697-PA | 1..534 | 5..540 | 2760 | 96.3 | Plus |
Dsec\GM11886-PA | 429 | GM11886-PA | 276..427 | 133..287 | 386 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20083-PA | 538 | GD20083-PA | 1..538 | 1..540 | 2822 | 97.6 | Plus |
Dsim\GD11884-PA | 429 | GD11884-PA | 276..427 | 133..287 | 385 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10168-PA | 565 | GJ10168-PA | 1..565 | 1..540 | 1843 | 68.4 | Plus |
Dvir\GJ21244-PA | 455 | GJ21244-PA | 302..449 | 133..283 | 355 | 45.7 | Plus |
Translation from 93 to 1715
> LD08718.hyp MRIKMDCEVQEQHKQQQQQQQVHQQQQKHGSSNKLPVRKQESCSDDDESQ SPSRTTERQNLEFAKKLGYSEQSIHSALTRLGSEAKQNELLAELIKLTAD APRPAHIGGGGSPSSMTSTLSSPTGGSNSSGLRHIVIDGSNVALSHGNNL VFSCRGIRICVDWFRQRGHRDITAFVPNWRKEMANNNIADQELLYELEHE RYLVFTPSRHLDGKRVSCYDDRFILKLAVETDGIVVSNDNYRDLILESNE FRRVVQERLLMYSFVNDIFMPPDDPLGRSGPNLDLFLCSQTQQKMADAQQ LCPYGKKCTYGQKCKFRHHNQAPLLQRLPLQASHSAPLHTNGGQQLVSPG GNNNNVKINSLISREPLGRTKSNTIEQVCQGFSAQMDLSEGAVESSQPNR HKKLQRQQPPPAYRLLVPTYSAPLQQQQHQAQQQHQQSNSSTNYHHQYLT RTPSAPVTDQGLGLPLPAHNFAHLSASDSRINEELHASQQLPREEQRRLL RYHLGSLFPPHQVHAVLQLYPEETDAKTICAAILNLFPHN*