BDGP Sequence Production Resources |
Search the DGRC for LD08814
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 88 |
Well: | 14 |
Vector: | pBS SK- |
Associated Gene/Transcript | IntS11-RA |
Protein status: | LD08814.pep: gold |
Preliminary Size: | 2120 |
Sequenced Size: | 2096 |
Gene | Date | Evidence |
---|---|---|
CG1972 | 2001-01-01 | Release 2 assignment |
CG1972 | 2001-10-10 | Blastp of sequenced clone |
CG1972 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1972 | 2008-04-29 | Release 5.5 accounting |
CG1972 | 2008-08-15 | Release 5.9 accounting |
CG1972 | 2008-12-18 | 5.12 accounting |
2096 bp (2096 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061097
> LD08814.complete GCCTTGCTGTTTACAAAAATCACGGTCGACTTTTTCGACAATTTCATTTA CCAGCGCAACAAGTGGCCGCAAGAAAGCAGGAGAGTGGAGCCGGGTGATC CTGATCCCTTCCAGAAATGCCGGACATCAAGATAACGCCCTTGGGCGCCG GCCAGGATGTGGGCCGCAGCTGTCTGCTGCTCTCGATGGGCGGGAAGAAC ATAATGCTCGACTGCGGGATGCATATGGGCTACAACGACGAGCGCCGCTT CCCGGACTTCTCCTACATAGTGCCGGAGGGTCCGATCACCAGCCACATTG ACTGTGTGATCATCTCGCACTTCCACCTGGATCACTGCGGGGCCTTGCCC TACATGTCAGAGATTGTGGGCTACACGGGGCCCATCTACATGACGCATCC GACCAAGGCCATAGCACCCATCCTCCTGGAGGACATGCGGAAGGTGGCCG TAGAGCGGAAAGGCGAGTCGAACTTCTTTACCACCCAGATGATCAAGGAC TGCATGAAGAAGGTGATTCCCGTCACACTTCACCAGAGTATGATGGTGGA CACGGACCTTGAGATCAAAGCCTACTATGCAGGCCATGTCCTGGGCGCCG CCATGTTCTGGATCAAGGTGGGCTCCCAGAGCGTTGTCTACACGGGGGAC TACAACATGACTCCAGACAGGCATCTGGGAGCCGCCTGGATAGACAAGTG CCGGCCGGACTTGCTGATCTCCGAGAGCACCTACGCCACTACCATTAGGG ACTCGAAGCGGTGTCGCGAGAGGGACTTCCTCAAGAAAGTTCACGAGTGC GTGGCTAAGGGCGGCAAGGTTTTAATCCCTGTTTTTGCCCTGGGTCGCGC CCAGGAGCTGTGCATCCTGCTGGAGACGTACTGGGAGCGCATGAACCTCA AGTACCCCATATACTTTGCTCTGGGTCTTACCGAGAAGGCCAATACCTAC TACAAAATGTTCATCACCTGGACGAACCAGAAGATCCGCAAGACCTTCGT TCACCGCAACATGTTCGACTTCAAGCACATCAAGCCCTTTGACAAGGCCT ACATCGACAATCCTGGCGCGATGGTAGTGTTCGCCACGCCAGGCATGCTG CACGCAGGTCTTTCCCTGCAGATCTTCAAGAAGTGGGCGCCGAATGAGAA CAACATGGTGATTATGCCCGGCTACTGTGTGCAGGGAACCGTGGGCAACA AGATTCTCGGTGGCGCCAAGAAGGTGGAGTTCGAGAACCGCCAGGTGGTC GAGGTCAAAATGGCCGTGGAGTACATGAGCTTCTCGGCCCATGCAGATGC CAAAGGCATTATGCAGCTAATTCAGAACTGTGAGCCAAAGAACGTCATGC TCGTCCATGGTGAAGCAGGGAAGATGAAGTTCCTGCGCTCGAAGATCAAA GACGAATTCAACCTGGAAACCTACATGCCGGCCAACGGCGAAACCTGTGT GATTTCTACGCCTGTGAAGATACCAGTAGATGCGTCCGTTTCCCTGCTTA AAGCAGAGGCCCGGTCCTACAACGCCCAGCCACCGGATCCCAAGAGGCGG CGACTAATCCATGGCGTCCTCGTAATGAAGGACAATCGAATAATGCTGCA AAACCTAACCGATGCCCTGAAGGAAATCGGAATTAATCGACATGTTATGC GATTTACATCCAAGGTCAAAATGGACGACTCCGGACCGGTCATTCGCACA AGCGAAAGACTGAAGACTCTGCTCGAAGAAAAGCTAGCCGGCTGGACGGT GACGATGCAGGAGAACGGCTCCATAGCCATCGAATCCGTTGAGGTGAAGG TGGAGGAGGACGAGAAGGATCCCAAGCAGAAGAACATTTTGATATCGTGG ACCAACCAGGACGAGGACATTGGAGCCTACATACTGAATGTGCTGCAGAA TATGTGCTAGGCAACGAAGAAGCATCCCATTGAAATCCCACGCCTTAATT CCATAGATAAGCACAAAGTGTAGATACCACCAATTTCTGAAAGTTTAAAG AGTATCAAAATATACATAAACGTTCCAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1972-RA | 2123 | CG1972-RA | 67..2094 | 1..2028 | 10140 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 25568365..25569341 | 330..1306 | 4705 | 98.8 | Plus |
chr3R | 27901430 | chr3R | 25569394..25570116 | 1304..2026 | 3450 | 98.5 | Plus |
chr3R | 27901430 | chr3R | 25567957..25568286 | 1..330 | 1650 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 29745762..29746738 | 330..1306 | 4885 | 100 | Plus |
3R | 32079331 | 3R | 29746791..29747515 | 1304..2028 | 3625 | 100 | Plus |
3R | 32079331 | 3R | 29745354..29745683 | 1..330 | 1650 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 29486593..29487569 | 330..1306 | 4885 | 100 | Plus |
3R | 31820162 | 3R | 29487622..29488346 | 1304..2028 | 3625 | 100 | Plus |
3R | 31820162 | 3R | 29486185..29486514 | 1..330 | 1650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 25567957..25568286 | 1..330 | 100 | -> | Plus |
chr3R | 25568366..25569340 | 331..1305 | 98 | -> | Plus |
chr3R | 25569396..25570116 | 1306..2026 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1972-RA | 1..1794 | 117..1910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1972-RA | 1..1794 | 117..1910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS11-RA | 1..1794 | 117..1910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1972-RA | 1..1794 | 117..1910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS11-RA | 1..1794 | 117..1910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1972-RA | 1..2026 | 1..2026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1972-RA | 1..2026 | 1..2026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS11-RA | 18..2043 | 1..2026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1972-RA | 1..2026 | 1..2026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS11-RA | 18..2043 | 1..2026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29745354..29745683 | 1..330 | 100 | -> | Plus |
3R | 29745763..29746737 | 331..1305 | 100 | -> | Plus |
3R | 29746793..29747513 | 1306..2026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29745354..29745683 | 1..330 | 100 | -> | Plus |
3R | 29745763..29746737 | 331..1305 | 100 | -> | Plus |
3R | 29746793..29747513 | 1306..2026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29745354..29745683 | 1..330 | 100 | -> | Plus |
3R | 29745763..29746737 | 331..1305 | 100 | -> | Plus |
3R | 29746793..29747513 | 1306..2026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 25571076..25571405 | 1..330 | 100 | -> | Plus |
arm_3R | 25571485..25572459 | 331..1305 | 100 | -> | Plus |
arm_3R | 25572515..25573235 | 1306..2026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29486185..29486514 | 1..330 | 100 | -> | Plus |
3R | 29486594..29487568 | 331..1305 | 100 | -> | Plus |
3R | 29487624..29488344 | 1306..2026 | 100 | Plus |
Translation from 116 to 1909
> LD08814.pep MPDIKITPLGAGQDVGRSCLLLSMGGKNIMLDCGMHMGYNDERRFPDFSY IVPEGPITSHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIA PILLEDMRKVAVERKGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEI KAYYAGHVLGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLL ISESTYATTIRDSKRCRERDFLKKVHECVAKGGKVLIPVFALGRAQELCI LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKTFVHRNMF DFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM PGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQ LIQNCEPKNVMLVHGEAGKMKFLRSKIKDEFNLETYMPANGETCVISTPV KIPVDASVSLLKAEARSYNAQPPDPKRRRLIHGVLVMKDNRIMLQNLTDA LKEIGINRHVMRFTSKVKMDDSGPVIRTSERLKTLLEEKLAGWTVTMQEN GSIAIESVEVKVEEDEKDPKQKNILISWTNQDEDIGAYILNVLQNMC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23370-PA | 597 | GF23370-PA | 1..597 | 1..597 | 3190 | 98.3 | Plus |
Dana\GF18101-PA | 684 | GF18101-PA | 18..505 | 4..499 | 838 | 36.8 | Plus |
Dana\GF16269-PA | 756 | GF16269-PA | 5..392 | 4..383 | 379 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11690-PA | 597 | GG11690-PA | 1..597 | 1..597 | 3214 | 99.3 | Plus |
Dere\GG16362-PA | 684 | GG16362-PA | 10..456 | 1..440 | 836 | 38.8 | Plus |
Dere\GG11633-PA | 756 | GG11633-PA | 5..392 | 4..383 | 374 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14325-PA | 597 | GH14325-PA | 1..597 | 1..597 | 3092 | 96 | Plus |
Dgri\GH19212-PA | 686 | GH19212-PA | 12..458 | 1..440 | 838 | 39.6 | Plus |
Dgri\GH10247-PA | 754 | GH10247-PA | 5..392 | 4..383 | 355 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
IntS11-PA | 597 | CG1972-PA | 1..597 | 1..597 | 3148 | 100 | Plus |
Cpsf73-PA | 684 | CG7698-PA | 10..456 | 1..440 | 817 | 39 | Plus |
Cpsf100-PA | 756 | CG1957-PA | 5..392 | 4..383 | 359 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10422-PA | 597 | GI10422-PA | 1..597 | 1..597 | 3115 | 95.5 | Plus |
Dmoj\GI24246-PA | 686 | GI24246-PA | 20..574 | 4..578 | 842 | 34.9 | Plus |
Dmoj\GI23051-PA | 754 | GI23051-PA | 5..392 | 4..383 | 354 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23717-PA | 597 | GL23717-PA | 1..597 | 1..597 | 3133 | 96.5 | Plus |
Dper\GL23169-PA | 684 | GL23169-PA | 18..572 | 4..578 | 842 | 34.5 | Plus |
Dper\GL24248-PA | 583 | GL24248-PA | 1..218 | 178..383 | 209 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15164-PA | 597 | GA15164-PA | 1..597 | 1..597 | 3151 | 97 | Plus |
Dpse\GA20526-PA | 684 | GA20526-PA | 18..572 | 4..578 | 841 | 34.5 | Plus |
Dpse\GA26549-PA | 731 | GA26549-PA | 5..392 | 4..383 | 365 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12816-PA | 597 | GM12816-PA | 1..597 | 1..597 | 3226 | 99.7 | Plus |
Dsec\GM18692-PA | 684 | GM18692-PA | 10..456 | 1..440 | 840 | 39 | Plus |
Dsec\GM12754-PA | 743 | GM12754-PA | 5..392 | 4..383 | 371 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21460-PA | 597 | GD21460-PA | 1..597 | 1..597 | 3226 | 99.7 | Plus |
Dsim\GD20157-PA | 684 | GD20157-PA | 10..456 | 1..440 | 837 | 39 | Plus |
Dsim\GD21403-PA | 664 | GD21403-PA | 17..300 | 116..383 | 280 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10637-PA | 597 | GJ10637-PA | 1..597 | 1..597 | 3151 | 96.5 | Plus |
Dvir\GJ10819-PA | 686 | GJ10819-PA | 20..574 | 4..578 | 840 | 34.9 | Plus |
Dvir\GJ24636-PA | 693 | GJ24636-PA | 5..392 | 4..383 | 356 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11920-PA | 597 | GK11920-PA | 1..597 | 1..597 | 3116 | 95.8 | Plus |
Dwil\GK13096-PA | 684 | GK13096-PA | 18..456 | 4..440 | 832 | 38.9 | Plus |
Dwil\GK22564-PA | 757 | GK22564-PA | 5..390 | 4..381 | 360 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23879-PA | 597 | GE23879-PA | 1..597 | 1..597 | 3216 | 99.5 | Plus |
Dyak\GE25184-PA | 684 | GE25184-PA | 10..456 | 1..440 | 839 | 39 | Plus |
Dyak\GE26465-PB | 548 | GE26465-PB | 5..392 | 4..383 | 374 | 26.8 | Plus |
Dyak\GE26465-PA | 756 | GE23822-PA | 5..392 | 4..383 | 374 | 26.8 | Plus |
Translation from 116 to 1909
> LD08814.hyp MPDIKITPLGAGQDVGRSCLLLSMGGKNIMLDCGMHMGYNDERRFPDFSY IVPEGPITSHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIA PILLEDMRKVAVERKGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEI KAYYAGHVLGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLL ISESTYATTIRDSKRCRERDFLKKVHECVAKGGKVLIPVFALGRAQELCI LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKTFVHRNMF DFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM PGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQ LIQNCEPKNVMLVHGEAGKMKFLRSKIKDEFNLETYMPANGETCVISTPV KIPVDASVSLLKAEARSYNAQPPDPKRRRLIHGVLVMKDNRIMLQNLTDA LKEIGINRHVMRFTSKVKMDDSGPVIRTSERLKTLLEEKLAGWTVTMQEN GSIAIESVEVKVEEDEKDPKQKNILISWTNQDEDIGAYILNVLQNMC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
IntS11-PA | 597 | CG1972-PA | 1..597 | 1..597 | 3148 | 100 | Plus |
Cpsf73-PA | 684 | CG7698-PA | 10..456 | 1..440 | 817 | 39 | Plus |
Cpsf100-PA | 756 | CG1957-PA | 5..392 | 4..383 | 359 | 26.5 | Plus |