BDGP Sequence Production Resources |
Search the DGRC for LD08826
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 88 |
Well: | 26 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG12935-RA |
Protein status: | LD08826.pep: gold |
Preliminary Size: | 1343 |
Sequenced Size: | 1232 |
Gene | Date | Evidence |
---|---|---|
CG12935 | 2001-01-01 | Release 2 assignment |
CG12935 | 2002-05-17 | Blastp of sequenced clone |
CG12935 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12935 | 2008-04-29 | Release 5.5 accounting |
CG12935 | 2008-08-15 | Release 5.9 accounting |
CG12935 | 2008-12-18 | 5.12 accounting |
1232 bp (1232 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118499
> LD08826.complete CAAAATCATATGTTGTTACTAGGGCTGTATAGCTAAACGTTTTATTTATG GGAGCAGAACTATTAAGTGCCAGTTGGAACTAAGACGTGATCTCCCCTGT CCCTTCTTTTGCTTAAAACTGAATCATATTGACAAATGTTTTCGGCCCGT TTAAGTAATGTGACGTTCTCATGAAATACAACGGTGAACATTGCAAAAAT CGTGTTATTTTCGTTAATTGTTCCAATGGGTGAACTAGTGAACGGAGTCA GCATGTGCCAGCCCTGATGGCTGCTTTGTTGAACTAGTTCCAGTTCCGGA GCTAGTGAACCAATAGCAAACGGAACAAAACAAAAACATCTGTAGATTAT AGGTTAATTTGTTTTATAATAACAAATGCGGGAATTATTCAATTAAGATG AGCAATCTGCTGAATTTTGCCCTGCGGCAGGGCGTCAACTCCATCAAGCG CCTTAGCCTCCAGAGTTTCAGACTGGCAGCTCCGGCCATTGTAACAAAAA CGCCGGTTACTTCCACGATAAAGAGATTCTCCTCCCAAGCCGCCCCCTTC GATGTGAACACCAGTGTCCCCAAGGACATAATACTTTTCAAGTATGAAAA CCCCCGATTCTACCAGATGCTTAACTTTTTCGGGGTGTGTCAGTTTGTTT TCTGGACATATCTCTCGCACTTCGCCTTCACGACGCTTAAGGATGCTCCA GTGGTGGAAAAACCCGGAGAGGAGCTGAAGTGGTTCCAGCGCATAAATCT GGGCGATAATAAGTACAGAAATGGCATTACAGCCTGTAGCTTTCTGATAG GATATGGCATACTGTTTGCTGTCTGGATGTTTACCCTGCGATCGGTGCGT TTTCTTATCTTGAGAAAGGGTGGTCAGAGCGTTTCCTTTGTGACCTACGG TCCCTTCAACCGGAATCGCATTATGACCGTGCCATTAAAGTGCGTCTCCG CCGAGGAATCACGGAACATGGCCAGGGTGCAGCTACCCATTAAGGTGAAG GGCAAGACACTGTATTACGTCCTGGATATGCGTGGCGAGTTTCGGAATGG CGAGTTATTCGATTACACGGCGGGCCTCAAGCGTCGCATTTAAAGGGCAA GTTTTGTTGTTTTGTAGCTTATTATTTGTAAATAAAGATGTACACTAATT AAAACTAAAATGCGGCTTAGTAAATGGGCTCCGGCTTCTGGGTGAGCAGC AGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
1360 | 3409 | 1360 1360 3409bp | 2986..3099 | 282..392 | 149 | 61.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 6696930..6697729 | 1..800 | 99 | -> | Plus |
chr2R | 6697789..6698193 | 801..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12935-RA | 1..696 | 398..1093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12935-RA | 1..696 | 398..1093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12935-RA | 1..696 | 398..1093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12935-RA | 1..696 | 398..1093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12935-RA | 1..696 | 398..1093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12935-RA | 1..1204 | 2..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12935-RA | 1..1204 | 2..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12935-RA | 1..1200 | 6..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12935-RA | 1..1204 | 2..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12935-RA | 1..1200 | 6..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10809392..10810191 | 1..800 | 100 | -> | Plus |
2R | 10810251..10810655 | 801..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10809392..10810191 | 1..800 | 100 | -> | Plus |
2R | 10810251..10810655 | 801..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10809392..10810191 | 1..800 | 100 | -> | Plus |
2R | 10810251..10810655 | 801..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 6696897..6697696 | 1..800 | 100 | -> | Plus |
arm_2R | 6697756..6698160 | 801..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10811450..10811854 | 801..1205 | 100 | Plus | |
2R | 10810591..10811390 | 1..800 | 100 | -> | Plus |
Translation from 397 to 1092
> LD08826.pep MSNLLNFALRQGVNSIKRLSLQSFRLAAPAIVTKTPVTSTIKRFSSQAAP FDVNTSVPKDIILFKYENPRFYQMLNFFGVCQFVFWTYLSHFAFTTLKDA PVVEKPGEELKWFQRINLGDNKYRNGITACSFLIGYGILFAVWMFTLRSV RFLILRKGGQSVSFVTYGPFNRNRIMTVPLKCVSAEESRNMARVQLPIKV KGKTLYYVLDMRGEFRNGELFDYTAGLKRRI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13775-PA | 233 | GF13775-PA | 1..233 | 1..231 | 1093 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20148-PA | 231 | GG20148-PA | 1..231 | 1..231 | 1190 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21270-PA | 229 | GH21270-PA | 1..229 | 1..231 | 977 | 79.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12935-PB | 231 | CG12935-PB | 1..231 | 1..231 | 1198 | 100 | Plus |
CG12935-PA | 231 | CG12935-PA | 1..231 | 1..231 | 1198 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20396-PA | 231 | GI20396-PA | 1..231 | 1..231 | 1009 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17306-PA | 231 | GL17306-PA | 1..231 | 1..231 | 1067 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11921-PA | 231 | GA11921-PA | 1..231 | 1..231 | 1067 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21237-PA | 231 | GM21237-PA | 1..231 | 1..231 | 1216 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10755-PA | 231 | GD10755-PA | 1..231 | 1..231 | 1216 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22225-PA | 231 | GJ22225-PA | 1..231 | 1..231 | 1029 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19663-PA | 229 | GK19663-PA | 1..229 | 1..231 | 961 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12837-PA | 231 | GE12837-PA | 1..231 | 1..231 | 1182 | 95.7 | Plus |
Translation from 397 to 1092
> LD08826.hyp MSNLLNFALRQGVNSIKRLSLQSFRLAAPAIVTKTPVTSTIKRFSSQAAP FDVNTSVPKDIILFKYENPRFYQMLNFFGVCQFVFWTYLSHFAFTTLKDA PVVEKPGEELKWFQRINLGDNKYRNGITACSFLIGYGILFAVWMFTLRSV RFLILRKGGQSVSFVTYGPFNRNRIMTVPLKCVSAEESRNMARVQLPIKV KGKTLYYVLDMRGEFRNGELFDYTAGLKRRI*