BDGP Sequence Production Resources |
Search the DGRC for LD09025
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 90 |
Well: | 25 |
Vector: | pBS SK- |
Associated Gene/Transcript | eIF-2gamma-RB |
Protein status: | LD09025.pep: gold |
Preliminary Size: | 1838 |
Sequenced Size: | 1898 |
Gene | Date | Evidence |
---|---|---|
CG6476 | 2001-01-01 | Release 2 assignment |
CG6476 | 2001-10-10 | Blastp of sequenced clone |
CG6476 | 2003-01-01 | Sim4 clustering to Release 3 |
Su(var)3-9 | 2008-04-29 | Release 5.5 accounting |
Su(var)3-9 | 2008-08-15 | Release 5.9 accounting |
Su(var)3-9 | 2008-12-18 | 5.12 accounting |
1898 bp (1898 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061102
> LD09025.complete CCGAGCTGTAATAGCTGAAAATTATTATTTTCATTTTGCATACGCATCGT TTTTGAAAACATCAGCAACATGGCCACGGCTGAAGCCCAGATCGGTGTGA ACAGGAACTTGCAGAAGCAGGACCTCAGCAACTTGGACGTCTCTAAACTA ACGCCTCTATCACCGGAGGTCATCTCCCGACAGGCGACCATCAACATCGG CACCATCGGTCATGTGGCTCACGGCAAATCCACGGTGGTCAAAGCCATAT CCGGCGTGCAGACTGTGCGCTTCAAGAACGAACTGGAGCGCAACATCACA ATCAAGCTGGGTTATGCCAACGCCAAAATCTACAAGTGTGACAACCCCAA GTGCCCGCGCCCGGCCAGCTTCGTATCGGATGCATCCAGCAAGGACGACA GCTTGCCCTGCACTCGGCTCAACTGCTCCGGCAACTTCAGACTGGTGCGA CATGTGAGCTTCGTGGATTGCCCCGGTCACGACATTCTTATGGCTACCAT GTTGAACGGTGCTGCTGTGATGGACGCTGCTCTGCTGCTCATTGCTGGCA ATGAATCCTGTCCACAACCGCAAACCTCTGAGCATTTGGCCGCCATTGAG ATTATGAAGCTGAAACAGATTCTGATCTTGCAAAACAAGATCGATCTGAT CAAGGAGAGCCAGGCGAAAGAGCAGTACGAGGAGATCACCAAATTCGTCC AGGGCACCGTAGCTGAGGGCGCTCCGATCATTCCGATCTCGGCCCAGCTT AAGTACAACATCGATGTGCTCTGCGAGTACATTGTGAACAAGATACCAGT GCCGCCGCGTGACTTCAATGCCCCGCCCCGTCTGATCGTCATCCGATCCT TCGACGTGAACAAGCCAGGCTGTGAGGTGGCAGACCTTAAGGGCGGTGTG GCCGGTGGCTCCATTCTGAGCGGCGTGCTGAAGGTAGGCCAAGAGATCGA GGTGCGTCCGGGCGTTGTGACCAAGGATAGCGATGGCAACATCACCTGCC GTCCAATCTTCTCCCGTATCGTCTCGCTCTTCGCCGAACAGAATGAGCTG CAGTACGCCGTGCCCGGCGGTCTGATTGGTGTGGGCACCAAGATCGATCC TACGCTGTGCCGTGCCGATCGTTTGGTCGGTCAGGTGCTAGGCGCCGTTG GCCAGCTGCCGGACATCTACCAGGAGCTGGAAATCTCGTATTACCTGCTG CGTCGCCTTCTCGGCGTCCGTACCGATGGTGACAAGAAGGGAGCGCGCGT TGAGAAGCTGCAGAAGAACGAAATCCTGTTGGTTAATATCGGATCCCTCA GCACTGGTGGCCGCATCTCGGCCACCAAAGGTGATTTGGCCAAGATCGTT CTTACGACGCCTGTGTGCACGGAGAAGGGCGAGAAGATTGCACTCAGCAG ACGTGTGGAGAACCATTGGCGTTTGATTGGCTGGGGTCAGATCTTCGGAG GCAAGACAATCACACCCGTTCTGGACAGCCAGGTGGCAAAGAAGTAGAAT TTAGTTAGGATCCGAATGGTTCTACTTTTAAGAACAACATCAGCGGCAAA AGTGGCAGCATCATCTTTATTAGGCCTCTTCACACTGCTCCTTCTTGTCC CACAGCTCCATTCTTCCCGTGTCCGTTGATCAAACCGAAACTAATTAGTA CCAACATGAAATACATACCTAACTTAATTTATTTTATTGAATTTTGTTGT CGAGTATGTATATAATATGAAAACACACGATTCGCTTGCGAGTATTGTGC ATCTATAGCAGAATCAGGCATTAAAAAAGCAACTAATAGGGTATACCTTT ATATATTATAATAACTAAAGGCAAATCTGATACATCGTAAAATTGTTTTT ATGATTTAAATACAAAACAAAAACTAAACGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Su(var)3-9-RB | 2085 | Su(var)3-9-RB | 66..1960 | 1..1895 | 9460 | 99.9 | Plus |
Su(var)3-9-RC | 2095 | Su(var)3-9-RC | 210..1970 | 135..1895 | 8790 | 99.9 | Plus |
Su(var)3-9-RA | 2405 | Su(var)3-9-RA | 59..368 | 1..310 | 1550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11083140..11084018 | 1421..543 | 4380 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 11082614..11083073 | 1880..1421 | 2300 | 100 | Minus |
chr3R | 27901430 | chr3R | 11084079..11084317 | 548..310 | 1195 | 100 | Minus |
chr3R | 27901430 | chr3R | 11087175..11087352 | 312..135 | 890 | 100 | Minus |
chr3R | 27901430 | chr3R | 11087911..11088046 | 136..1 | 680 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15258510..15259388 | 1421..543 | 4380 | 99.9 | Minus |
3R | 32079331 | 3R | 15257969..15258443 | 1895..1421 | 2360 | 99.8 | Minus |
3R | 32079331 | 3R | 15259449..15259687 | 548..310 | 1195 | 100 | Minus |
3R | 32079331 | 3R | 15262545..15262722 | 312..135 | 890 | 100 | Minus |
3R | 32079331 | 3R | 15263281..15263416 | 136..1 | 680 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14999341..15000219 | 1421..543 | 4380 | 99.8 | Minus |
3R | 31820162 | 3R | 14998800..14999274 | 1895..1421 | 2360 | 99.7 | Minus |
3R | 31820162 | 3R | 15000280..15000518 | 548..310 | 1195 | 100 | Minus |
3R | 31820162 | 3R | 15003376..15003553 | 312..135 | 890 | 100 | Minus |
3R | 31820162 | 3R | 15004112..15004247 | 136..1 | 680 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11082614..11083072 | 1422..1880 | 100 | <- | Minus |
chr3R | 11083140..11084013 | 548..1421 | 100 | <- | Minus |
chr3R | 11084080..11084316 | 311..547 | 100 | <- | Minus |
chr3R | 11087177..11087351 | 136..310 | 100 | <- | Minus |
chr3R | 11087912..11088046 | 1..135 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-9-RB | 1..1428 | 70..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-9-RB | 1..1428 | 70..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2gamma-RB | 1..1428 | 70..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-9-RB | 1..1428 | 70..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2gamma-RB | 1..1428 | 70..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-9-RB | 59..1938 | 1..1880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-9-RB | 59..1938 | 1..1880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2gamma-RB | 43..1922 | 1..1880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-9-RB | 59..1938 | 1..1880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2gamma-RB | 43..1922 | 1..1880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15257984..15258442 | 1422..1880 | 100 | <- | Minus |
3R | 15258510..15259383 | 548..1421 | 100 | <- | Minus |
3R | 15259450..15259686 | 311..547 | 100 | <- | Minus |
3R | 15262547..15262721 | 136..310 | 100 | <- | Minus |
3R | 15263282..15263416 | 1..135 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15257984..15258442 | 1422..1880 | 100 | <- | Minus |
3R | 15258510..15259383 | 548..1421 | 100 | <- | Minus |
3R | 15259450..15259686 | 311..547 | 100 | <- | Minus |
3R | 15262547..15262721 | 136..310 | 100 | <- | Minus |
3R | 15263282..15263416 | 1..135 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15257984..15258442 | 1422..1880 | 100 | <- | Minus |
3R | 15258510..15259383 | 548..1421 | 100 | <- | Minus |
3R | 15259450..15259686 | 311..547 | 100 | <- | Minus |
3R | 15262547..15262721 | 136..310 | 100 | <- | Minus |
3R | 15263282..15263416 | 1..135 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11085172..11085408 | 311..547 | 100 | <- | Minus |
arm_3R | 11088269..11088443 | 136..310 | 100 | <- | Minus |
arm_3R | 11089004..11089138 | 1..135 | 100 | Minus | |
arm_3R | 11083706..11084164 | 1422..1880 | 100 | <- | Minus |
arm_3R | 11084232..11085105 | 548..1421 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14998815..14999273 | 1422..1880 | 100 | <- | Minus |
3R | 14999341..15000214 | 548..1421 | 100 | <- | Minus |
3R | 15000281..15000517 | 311..547 | 100 | <- | Minus |
3R | 15003378..15003552 | 136..310 | 100 | <- | Minus |
3R | 15004113..15004247 | 1..135 | 100 | Minus |
Translation from 69 to 1496
> LD09025.pep MATAEAQIGVNRNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVA HGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCDNPKCPRPAS FVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAV MDAALLLIAGNESCPQPQTSEHLAAIEIMKLKQILILQNKIDLIKESQAK EQYEEITKFVQGTVAEGAPIIPISAQLKYNIDVLCEYIVNKIPVPPRDFN APPRLIVIRSFDVNKPGCEVADLKGGVAGGSILSGVLKVGQEIEVRPGVV TKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTKIDPTLCRAD RLVGQVLGAVGQLPDIYQELEISYYLLRRLLGVRTDGDKKGARVEKLQKN EILLVNIGSLSTGGRISATKGDLAKIVLTTPVCTEKGEKIALSRRVENHW RLIGWGQIFGGKTITPVLDSQVAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11769-PA | 1020 | GF11769-PA | 617..1020 | 72..475 | 2061 | 96.3 | Plus |
Dana\GF11769-PA | 1020 | GF11769-PA | 1..80 | 1..80 | 384 | 95 | Plus |
Dana\GF13674-PA | 456 | GF13674-PA | 59..365 | 42..384 | 208 | 28.1 | Plus |
Dana\GF12096-PA | 440 | GF12096-PA | 5..226 | 41..295 | 199 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\eIF2gamma-PA | 475 | GG20759-PA | 1..475 | 1..475 | 2495 | 99.8 | Plus |
Dere\GG20777-PA | 512 | GG20777-PA | 5..230 | 41..295 | 195 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18750-PA | 1035 | GH18750-PA | 642..1035 | 82..475 | 2014 | 96.2 | Plus |
Dgri\GH18750-PA | 1035 | GH18750-PA | 1..80 | 1..80 | 360 | 90 | Plus |
Dgri\GH21181-PA | 525 | GH21181-PA | 2..236 | 37..295 | 188 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF2gamma-PD | 475 | CG43665-PD | 1..475 | 1..475 | 2416 | 100 | Plus |
eIF2gamma-PB | 475 | CG43665-PB | 1..475 | 1..475 | 2416 | 100 | Plus |
eIF2gamma-PC | 467 | CG43665-PC | 15..467 | 23..475 | 2310 | 100 | Plus |
Su(var)3-9-PA | 635 | CG43664-PA | 1..89 | 1..89 | 390 | 92.1 | Plus |
eEFSec-PA | 511 | CG9841-PA | 6..230 | 42..295 | 201 | 27.8 | Plus |
mEFTu2-PA | 456 | CG12736-PA | 59..365 | 42..384 | 198 | 26.9 | Plus |
mEFTu1-PB | 489 | CG6050-PB | 84..315 | 42..294 | 186 | 26.4 | Plus |
mEFTu1-PA | 489 | CG6050-PA | 84..315 | 42..294 | 186 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24667-PA | 1017 | GI24667-PA | 618..1017 | 76..475 | 2030 | 95.2 | Plus |
Dmoj\GI24667-PA | 1017 | GI24667-PA | 1..80 | 1..80 | 374 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12073-PA | 1004 | GL12073-PA | 622..991 | 82..451 | 1934 | 98.9 | Plus |
Dper\GL12073-PA | 1004 | GL12073-PA | 1..80 | 1..80 | 377 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19622-PB | 473 | GA19622-PB | 1..471 | 1..471 | 2422 | 97.9 | Plus |
Dpse\GA19622-PC | 633 | GA19622-PC | 1..80 | 1..80 | 378 | 93.8 | Plus |
Dpse\GA22068-PA | 512 | GA22068-PA | 5..230 | 41..295 | 181 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25792-PA | 1024 | GM25792-PA | 631..1024 | 82..475 | 2100 | 100 | Plus |
Dsec\GM25792-PA | 1024 | GM25792-PA | 1..80 | 1..80 | 387 | 97.5 | Plus |
Dsec\GM15722-PA | 512 | GM15722-PA | 5..230 | 41..295 | 194 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20368-PA | 1024 | GD20368-PA | 631..1024 | 82..475 | 2100 | 100 | Plus |
Dsim\GD20368-PA | 1024 | GD20368-PA | 1..80 | 1..80 | 399 | 100 | Plus |
Dsim\GD25199-PA | 512 | GD25199-PA | 5..230 | 41..295 | 183 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24041-PA | 1044 | GJ24041-PA | 645..1044 | 76..475 | 2038 | 96 | Plus |
Dvir\GJ24041-PA | 1044 | GJ24041-PA | 1..80 | 1..80 | 373 | 92.5 | Plus |
Dvir\GJ22318-PA | 516 | GJ22318-PA | 5..230 | 41..295 | 205 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12089-PA | 1007 | GK12089-PA | 607..1007 | 75..475 | 2026 | 95.3 | Plus |
Dwil\GK12089-PA | 1007 | GK12089-PA | 1..80 | 1..80 | 369 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26397-PA | 1026 | GE26397-PA | 633..1026 | 82..475 | 2094 | 100 | Plus |
Dyak\GE26397-PA | 1026 | GE26397-PA | 1..80 | 1..80 | 396 | 98.8 | Plus |
Dyak\GE13715-PA | 512 | GE13715-PA | 5..230 | 41..295 | 196 | 29.5 | Plus |
Translation from 69 to 1496
> LD09025.hyp MATAEAQIGVNRNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVA HGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCDNPKCPRPAS FVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAV MDAALLLIAGNESCPQPQTSEHLAAIEIMKLKQILILQNKIDLIKESQAK EQYEEITKFVQGTVAEGAPIIPISAQLKYNIDVLCEYIVNKIPVPPRDFN APPRLIVIRSFDVNKPGCEVADLKGGVAGGSILSGVLKVGQEIEVRPGVV TKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTKIDPTLCRAD RLVGQVLGAVGQLPDIYQELEISYYLLRRLLGVRTDGDKKGARVEKLQKN EILLVNIGSLSTGGRISATKGDLAKIVLTTPVCTEKGEKIALSRRVENHW RLIGWGQIFGGKTITPVLDSQVAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF-2gamma-PD | 475 | CG43665-PD | 1..475 | 1..475 | 2416 | 100 | Plus |
eIF-2gamma-PB | 475 | CG43665-PB | 1..475 | 1..475 | 2416 | 100 | Plus |
eIF-2gamma-PC | 467 | CG43665-PC | 15..467 | 23..475 | 2310 | 100 | Plus |
Su(var)3-9-PA | 635 | CG43664-PA | 1..89 | 1..89 | 390 | 92.1 | Plus |
EfSec-PA | 511 | CG9841-PA | 6..230 | 42..295 | 201 | 27.8 | Plus |