BDGP Sequence Production Resources |
Search the DGRC for LD09078
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 90 |
Well: | 78 |
Vector: | pBS SK- |
Associated Gene/Transcript | Bap60-RA |
Protein status: | LD09078.pep: gold |
Preliminary Size: | 2112 |
Sequenced Size: | 2026 |
Gene | Date | Evidence |
---|---|---|
CG4303 | 2001-01-01 | Release 2 assignment |
CG4303 | 2001-11-09 | Blastp of sequenced clone |
CG4303 | 2003-01-01 | Sim4 clustering to Release 3 |
Bap60 | 2008-04-29 | Release 5.5 accounting |
Bap60 | 2008-08-15 | Release 5.9 accounting |
Bap60 | 2008-12-18 | 5.12 accounting |
2026 bp (2026 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069383
> LD09078.complete CCGCAGCCCTGCCAAACGTTGTAATATCTATCGCCCAGTCGACCACCACC AGTAATAGTGCATCCCTGTTTTGACGCCATTTTACAGGCGAAATTGTGTG TGTGTTTGACGCGTTGTTGTATTGAAACAAAAAGGCAGAAATTTTCCTTC GTCTGCAAAGGGCAATTGTTTACGGCTGGAAAAAAGGGAGGACTTCGTAG CAAAGATGTCGCAACGCTTTGCACCTGGCCAAGCGCCGGTGCAGTCGCGT TATCAGCCACCACCACCGGCGCCCGGCATGCGTCCCTATCCGCCGCCAGG CGCCTCTTTTCCACCGCGCGGGTTTCCCCTGCATCCGAACACTACTCAAC CTGTTCCCGGCACGGCGAACGTGGCCGGGGTACCGGGAGTTCCTGGAGTA CCCGGCGTACCGGGACCATCGCTACTGCAGCGCGCCGCCCAACAGCCGGG CTTTCAGAGCAGCCTTCGCGGTACTGGAGCCGGAGGTGGCGGTGTTGGAT CCGGCGGAGGCAGCAAGAGGTCAAATGAATCCCGCAGTTTGGGTGGCGGT GGTAGCAAAAGTGATTTTGCGACGGCCAAAAAGAAAAAGAAGCTGGCCGA AAAGATACTGCCGCAGAAGGTGCGGGATCTGGTGCCCGAATCGCAAGCGT ACATGGATCTGCTGACGTTTGAGCGAAAACTGGATGCCACCATAATGCGC AAACGTCTGGACATCCAGGAGGCCCTCAAGCGCCCCATGAAGCAGAAGCG CAAGCTGCGCATCTTCATCTCGAACACATTCTATCCCAGCAAGGAGCCCA CAAATGATGGCGAGGAGGGCGCCGTTGCCTCTTGGGAATTGCGGGTGGAG GGTCGCCTGTTAGAGGATGGCAAGGGCGATCCCAATACAAAGATCAAACG CAAGTTTTCGTCGTTTTTCAAGTCGCTGGTTATCGAGCTGGATAAGGAAC TGTACGGTCCGGACAACCATCTGGTCGAGTGGCATCGCACTCACACCACC CAGGAGACGGACGGGTTCCAGGTGAAGCGGCCGGGCGATCGCAATGTGCG CTGCACCATCCTCCTGCTGCTTGACTACCAGCCGCTGCAGTTCAAGCTGG ACCCGCGACTCGCCAGGTTGCTGGGCGTACACACACAGACCAGGCCGGTG ATCATATCCGCCCTGTGGCAGTACATCAAGACGCACAAGCTACAGGATGC CCACGAGCGGGAGTACATCAATTGCGACAAGTATCTGGAGCAGATATTCA GTTGCCAGCGGATGAAGTTTGCCGAGATACCGCAACGCCTCAATCCGCTG CTGCATCCGCCCGATCCGATTGTGATCAATCATTTCATTGAGAGCGGTGC AGAGAACAAGCAGACTGCCTGCTACGACATCGATGTGGAGGTGGATGATA CGCTCAAAAACCAGATGAACAGCTTCCTGATGAGCACTGCGAGCCAACAG GAGATCCAGGGGCTGGACACCAAGATCCACGAGACGGTGGACACGATCAA CCAGATGAAGACGAACAGGGAGTTCTTCCTAAGCTTCGCCAAGGATCCAC AAATGTTTATTCATCGCTGGATCATCAGTGAGACGAGGGATTTGAAGCTG ATGACCGATGTAGCTGGCAATCCGGAGGAGGAGCGTCGGGCGGAGTTCTA TTACCAGCCATGGACGCACGAGGCCGTTTCGCGCTACTTCTTCACCAAGG TCAACCAGAAGCGGGCCGAATTGGAGCAGGCGCTGGGCATACGCAACGGC TAGGTGAATGATGAGCTGATCATCTCCACCAGCCAATTCGTGGAGTCCAC CGTCAAGAGACCTCCATAAACCGTGCGCACGGCAAACTCTTTTTCCTTCG CCAGTTTAGTTTAAGCTTAAAATATTTCCTTTTTTTCCGACAAGCCGAAC TCCATCCCGTTCCAAAACGAAAATCCCCTTTGCAGTTGTCCCAAATACCC ACATCCAGCACAAATATTGGACTTAACTGTAAGCTAATAAAATGGCATAC AAATATAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Bap60-RA | 2067 | Bap60-RA | 40..2049 | 1..2010 | 10050 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13048810..13050093 | 1597..314 | 6405 | 99.9 | Minus |
chrX | 22417052 | chrX | 13048341..13048751 | 2006..1596 | 2025 | 99.5 | Minus |
chrX | 22417052 | chrX | 13050162..13050474 | 313..1 | 1565 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13157914..13159197 | 1597..314 | 6420 | 100 | Minus |
X | 23542271 | X | 13157441..13157855 | 2010..1596 | 2075 | 100 | Minus |
X | 23542271 | X | 13159266..13159578 | 313..1 | 1565 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13166012..13167295 | 1597..314 | 6420 | 100 | Minus |
X | 23527363 | X | 13165539..13165953 | 2010..1596 | 2075 | 100 | Minus |
X | 23527363 | X | 13167364..13167676 | 313..1 | 1565 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
invader1 | 4032 | invader1 INVADER 4032bp | 2175..2215 | 1890..1929 | 121 | 80.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13048341..13048749 | 1598..2006 | 99 | <- | Minus |
chrX | 13048810..13050093 | 314..1597 | 99 | <- | Minus |
chrX | 13050162..13050474 | 1..313 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bap60-RA | 1..1548 | 206..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bap60-RA | 1..1548 | 206..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bap60-RA | 1..1548 | 206..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bap60-RA | 1..1548 | 206..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bap60-RA | 1..1548 | 206..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bap60-RA | 1..2006 | 1..2006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bap60-RA | 1..2006 | 1..2006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bap60-RA | 1..1936 | 71..2006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bap60-RA | 1..2006 | 1..2006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bap60-RA | 1..1936 | 71..2006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13159266..13159578 | 1..313 | 100 | Minus | |
X | 13157445..13157853 | 1598..2006 | 100 | <- | Minus |
X | 13157914..13159197 | 314..1597 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13159266..13159578 | 1..313 | 100 | Minus | |
X | 13157445..13157853 | 1598..2006 | 100 | <- | Minus |
X | 13157914..13159197 | 314..1597 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13159266..13159578 | 1..313 | 100 | Minus | |
X | 13157445..13157853 | 1598..2006 | 100 | <- | Minus |
X | 13157914..13159197 | 314..1597 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13051478..13051886 | 1598..2006 | 100 | <- | Minus |
arm_X | 13051947..13053230 | 314..1597 | 100 | <- | Minus |
arm_X | 13053299..13053611 | 1..313 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13165543..13165951 | 1598..2006 | 100 | <- | Minus |
X | 13166012..13167295 | 314..1597 | 100 | <- | Minus |
X | 13167364..13167676 | 1..313 | 100 | Minus |
Translation from 205 to 1752
> LD09078.hyp MSQRFAPGQAPVQSRYQPPPPAPGMRPYPPPGASFPPRGFPLHPNTTQPV PGTANVAGVPGVPGVPGVPGPSLLQRAAQQPGFQSSLRGTGAGGGGVGSG GGSKRSNESRSLGGGGSKSDFATAKKKKKLAEKILPQKVRDLVPESQAYM DLLTFERKLDATIMRKRLDIQEALKRPMKQKRKLRIFISNTFYPSKEPTN DGEEGAVASWELRVEGRLLEDGKGDPNTKIKRKFSSFFKSLVIELDKELY GPDNHLVEWHRTHTTQETDGFQVKRPGDRNVRCTILLLLDYQPLQFKLDP RLARLLGVHTQTRPVIISALWQYIKTHKLQDAHEREYINCDKYLEQIFSC QRMKFAEIPQRLNPLLHPPDPIVINHFIESGAENKQTACYDIDVEVDDTL KNQMNSFLMSTASQQEIQGLDTKIHETVDTINQMKTNREFFLSFAKDPQM FIHRWIISETRDLKLMTDVAGNPEEERRAEFYYQPWTHEAVSRYFFTKVN QKRAELEQALGIRNG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Bap60-PA | 515 | CG4303-PA | 1..515 | 1..515 | 2722 | 100 | Plus |
Translation from 205 to 1752
> LD09078.pep MSQRFAPGQAPVQSRYQPPPPAPGMRPYPPPGASFPPRGFPLHPNTTQPV PGTANVAGVPGVPGVPGVPGPSLLQRAAQQPGFQSSLRGTGAGGGGVGSG GGSKRSNESRSLGGGGSKSDFATAKKKKKLAEKILPQKVRDLVPESQAYM DLLTFERKLDATIMRKRLDIQEALKRPMKQKRKLRIFISNTFYPSKEPTN DGEEGAVASWELRVEGRLLEDGKGDPNTKIKRKFSSFFKSLVIELDKELY GPDNHLVEWHRTHTTQETDGFQVKRPGDRNVRCTILLLLDYQPLQFKLDP RLARLLGVHTQTRPVIISALWQYIKTHKLQDAHEREYINCDKYLEQIFSC QRMKFAEIPQRLNPLLHPPDPIVINHFIESGAENKQTACYDIDVEVDDTL KNQMNSFLMSTASQQEIQGLDTKIHETVDTINQMKTNREFFLSFAKDPQM FIHRWIISETRDLKLMTDVAGNPEEERRAEFYYQPWTHEAVSRYFFTKVN QKRAELEQALGIRNG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20965-PA | 509 | GF20965-PA | 1..509 | 1..515 | 2372 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19519-PA | 515 | GG19519-PA | 1..515 | 1..515 | 2740 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24118-PA | 515 | GH24118-PA | 1..515 | 1..515 | 2341 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Bap60-PA | 515 | CG4303-PA | 1..515 | 1..515 | 2722 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16377-PA | 504 | GI16377-PA | 1..504 | 1..515 | 2375 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15872-PA | 506 | GL15872-PA | 1..506 | 1..515 | 2371 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18095-PA | 506 | GA18095-PA | 1..506 | 1..515 | 2371 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11510-PA | 509 | GM11510-PA | 31..509 | 37..515 | 2579 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15903-PA | 515 | GD15903-PA | 1..515 | 1..515 | 2762 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16750-PA | 505 | GJ16750-PA | 1..505 | 1..515 | 2366 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16421-PA | 529 | GK16421-PA | 1..529 | 1..515 | 2345 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Bap60-PA | 515 | GE16174-PA | 1..515 | 1..515 | 2734 | 98.6 | Plus |