BDGP Sequence Production Resources |
Search the DGRC for LD09158
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 91 |
Well: | 58 |
Vector: | pBS SK- |
Associated Gene/Transcript | VhaAC45-RA |
Protein status: | LD09158.pep: gold |
Preliminary Size: | 1951 |
Sequenced Size: | 1899 |
Gene | Date | Evidence |
---|---|---|
CG8029 | 2001-01-01 | Release 2 assignment |
CG8029 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8029 | 2003-01-14 | Blastp of sequenced clone |
CG8029 | 2008-04-29 | Release 5.5 accounting |
CG8029 | 2008-08-15 | Release 5.9 accounting |
CG8029 | 2008-12-18 | 5.12 accounting |
1899 bp (1899 high quality bases) assembled on 2003-01-14
GenBank Submission: BT003279
> LD09158.complete CGACGTCGAGCAAGGCAAAGCGAAAATTTTCACCACCATTTTTCGTTTGT AGTTTCAGTTCACTTTTCGGTTGGTTTTTAGTGCCTCTTGCGTTCTCCTT GGTTCCTTACTTATGCATTTTTCGTTCTCCTTTGTTTCCATTAAACCCCC ACCGAAGTAAGCGAATCCAGCGCGATGTTGTGGAAATCGCTGATTGCGTT GTGCGTCATTGGGGCTGCCGTGGCGGAGCAAACGCCCGTCTTTTTGTGGG GAGCCAACAGTGTGGCGAAACCCTCCCTGAAGACGGTGTCCCAAGTGGAG TTTGCCGAGCAGTTGGCTGCATTGCTGGAAGATCACATGGTCGTGGCCTT CGAGGAAAATGGCCTGAGCAGCAAGGACTTCCTGTGCTCCAACTCCCAGG CGCAGTCCTGCTACGCCCAGCTGCAGGGAGTGAGCCCCAAGACCTACTAC ACCAGCGTGGAGAACCCCTCGGAGGCACTGCGCTCAGTGGCCGCCAAGCG CGAGCACAACTCCATCGATGCCAGTGGAAAGCTGACCACGCCGGCCAAGT GTGCCGTAGGTACGGCCCTGTTTGTGACCTTCGAGGACGCCGCCGAGAGC CGGGAGGCCAGTCTGGAGTCACATGACGCCGCCATAGCTGCTATCAGCAA GCAGTTCGAGTGCAAGGTGGCTTATCTGTACCTGGCCGCCCCCTCCACGG CTCCTGTGGTGCAGCGTCGTACCCGCCGTGACACCGCCGCCACAACCGGT GGCATCATGTGGAAGTCGACCAATCAGTTTCAGATCTTCTACACTGCCCT GCTCTACAACGGCAACCCCATCACCGTCACCGACCTCAAGCTCACCAACT CTAGCTCTACCAAGCTATCCGTTGTTATGGACACATCTGTCGCCGACAAG CCAATCACCTTTGACGTTGTTTATAATGGCGGATACTTTAGTCTGAGCAA TTTGGTCTACGACAACAACAACTTCCGCTCCAGCGGCGTGAATGCCCCAA CCACGTTCTCTTACTCGTGCGGCAACCTCACCCTCGAGTCCGCGGCCGTC AACAACATGTACAACACCCTGAGCTTCAAGTCCCTGCAGCTGCAGGCTCC CTTCGATGGTACGTACAAGGAGGACTTTCCCTTCGGCGACTCCTGGGACT GTGTGGGCTTCGTGACGCCCGGTATCCTGATGGGACTGTTTGTGGTCGCC CTACTGCTGGTCATCATGTTCGTCGGCGTCTGCTGGATGATGGACATCAA CACGATGGACCGCTTCGACGATCCCAAGGGCAAGACTATCACCATCAATG CCGCCGCCGAGTAAACCGCCTACATCATCGGTTCACACCTTATTTGATTG TTCAATGCGCACTCAATATTCATTCCTTTATTCCTTCAGTCTATCCACAT GTATATGTTAACGAATCAATACTTAATACCGTACACGCATTACACATAAC ACATAACCGGGAAATTAGTCCTCACAATTTGTATCGTATCCGTAATTTTC GCCGCCAAGGATCAGTTTACGTTCAGCATCACAGCGTTGCTGATTCTTGT CGCCGACAAATTGCCTGAGGTTTTGCTTGCACCGACGCAGCATCCAGTAT TTCATTTAGAATAGCCCCTAAATGTCGTTTATCGAAGGAACTTTAAAAGA CGCACATGTGTGTGTGTGTTTAAGAGCGCGCGCGTGTGTGTGTGTGCACA TGGGCAGTAAATCTAATCCGAAGTATATCTAAGTGTTTTATAGTTTCTTG TTTGGCGCAAATATGCGAGACTAATTTATGCCTCTGTATGATAGTTTGTC ATTTGTGCAACCCTCCTGTTGTTCGCAGGCCCAACGAAAATAAAGTTTTT TTCAATTGTGTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5095987..5097224 | 625..1862 | 6175 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 5095162..5095421 | 1..260 | 1300 | 100 | Plus |
chr2R | 21145070 | chr2R | 5095654..5095915 | 364..625 | 1295 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 5095481..5095587 | 257..363 | 535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9208416..9209658 | 625..1867 | 6200 | 99.9 | Plus |
2R | 25286936 | 2R | 9208083..9208344 | 364..625 | 1310 | 100 | Plus |
2R | 25286936 | 2R | 9207591..9207850 | 1..260 | 1300 | 100 | Plus |
2R | 25286936 | 2R | 9207910..9208016 | 257..363 | 535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9209615..9210857 | 625..1867 | 6200 | 99.9 | Plus |
2R | 25260384 | 2R | 9209282..9209543 | 364..625 | 1310 | 100 | Plus |
2R | 25260384 | 2R | 9208790..9209049 | 1..260 | 1300 | 100 | Plus |
2R | 25260384 | 2R | 9209109..9209215 | 257..363 | 535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5095162..5095421 | 1..260 | 100 | -> | Plus |
chr2R | 5095485..5095587 | 261..363 | 100 | -> | Plus |
chr2R | 5095654..5095915 | 364..625 | 99 | -> | Plus |
chr2R | 5095988..5097226 | 626..1864 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8029-RA | 1..1140 | 175..1314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC45-RA | 1..1140 | 175..1314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC45-RB | 1..1140 | 175..1314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8029-RA | 1..1140 | 175..1314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC45-RB | 1..1140 | 175..1314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8029-RA | 29..1892 | 1..1864 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC45-RA | 29..1892 | 1..1864 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC45-RA | 31..1894 | 1..1864 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8029-RA | 29..1892 | 1..1864 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC45-RA | 31..1894 | 1..1864 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9208083..9208344 | 364..625 | 100 | -> | Plus |
2R | 9207591..9207850 | 1..260 | 100 | -> | Plus |
2R | 9207914..9208016 | 261..363 | 100 | -> | Plus |
2R | 9208417..9209655 | 626..1864 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9208083..9208344 | 364..625 | 100 | -> | Plus |
2R | 9207591..9207850 | 1..260 | 100 | -> | Plus |
2R | 9207914..9208016 | 261..363 | 100 | -> | Plus |
2R | 9208417..9209655 | 626..1864 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9208083..9208344 | 364..625 | 100 | -> | Plus |
2R | 9207591..9207850 | 1..260 | 100 | -> | Plus |
2R | 9207914..9208016 | 261..363 | 100 | -> | Plus |
2R | 9208417..9209655 | 626..1864 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5095096..5095355 | 1..260 | 100 | -> | Plus |
arm_2R | 5095419..5095521 | 261..363 | 100 | -> | Plus |
arm_2R | 5095588..5095849 | 364..625 | 100 | -> | Plus |
arm_2R | 5095922..5097160 | 626..1864 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9208790..9209049 | 1..260 | 100 | -> | Plus |
2R | 9209113..9209215 | 261..363 | 100 | -> | Plus |
2R | 9209282..9209543 | 364..625 | 100 | -> | Plus |
2R | 9209616..9210854 | 626..1864 | 99 | Plus |
Translation from 174 to 1313
> LD09158.pep MLWKSLIALCVIGAAVAEQTPVFLWGANSVAKPSLKTVSQVEFAEQLAAL LEDHMVVAFEENGLSSKDFLCSNSQAQSCYAQLQGVSPKTYYTSVENPSE ALRSVAAKREHNSIDASGKLTTPAKCAVGTALFVTFEDAAESREASLESH DAAIAAISKQFECKVAYLYLAAPSTAPVVQRRTRRDTAATTGGIMWKSTN QFQIFYTALLYNGNPITVTDLKLTNSSSTKLSVVMDTSVADKPITFDVVY NGGYFSLSNLVYDNNNFRSSGVNAPTTFSYSCGNLTLESAAVNNMYNTLS FKSLQLQAPFDGTYKEDFPFGDSWDCVGFVTPGILMGLFVVALLLVIMFV GVCWMMDINTMDRFDDPKGKTITINAAAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11814-PA | 378 | GF11814-PA | 1..378 | 1..379 | 1649 | 82.9 | Plus |
Dana\GF15670-PA | 423 | GF15670-PA | 8..407 | 6..360 | 189 | 22.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23426-PA | 379 | GG23426-PA | 1..379 | 1..379 | 1896 | 92.9 | Plus |
Dere\GG10259-PA | 428 | GG10259-PA | 10..408 | 6..358 | 185 | 21 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21865-PA | 382 | GH21865-PA | 1..382 | 1..379 | 1288 | 66.6 | Plus |
Dgri\GH11675-PA | 419 | GH11675-PA | 23..410 | 21..368 | 188 | 21.4 | Plus |
Dgri\GH18387-PA | 387 | GH18387-PA | 285..382 | 274..373 | 160 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
VhaAC45-PA | 379 | CG8029-PA | 1..379 | 1..379 | 1943 | 100 | Plus |
VhaAC45-PB | 379 | CG8029-PB | 1..379 | 1..379 | 1943 | 100 | Plus |
CG5421-PB | 426 | CG5421-PB | 10..418 | 6..367 | 183 | 21.5 | Plus |
CG5421-PA | 426 | CG5421-PA | 10..418 | 6..367 | 183 | 21.5 | Plus |
CG31030-PA | 384 | CG31030-PA | 281..379 | 273..373 | 153 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20366-PA | 387 | GI20366-PA | 1..387 | 1..379 | 1315 | 64.4 | Plus |
Dmoj\GI17120-PA | 415 | GI17120-PA | 4..174 | 13..189 | 180 | 27.6 | Plus |
Dmoj\GI23379-PA | 386 | GI23379-PA | 284..381 | 274..373 | 162 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17578-PA | 383 | GL17578-PA | 1..383 | 1..379 | 1610 | 77.5 | Plus |
Dper\GL18769-PA | 420 | GL18769-PA | 8..405 | 6..364 | 160 | 20.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20777-PA | 383 | GA20777-PA | 1..383 | 1..379 | 1612 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21109-PA | 379 | GM21109-PA | 1..379 | 1..379 | 1868 | 96.3 | Plus |
Dsec\GM26197-PA | 426 | GM26197-PA | 10..189 | 6..187 | 167 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10644-PA | 379 | GD10644-PA | 1..379 | 1..379 | 1965 | 96.8 | Plus |
Dsim\GD22118-PA | 426 | GD22118-PA | 10..406 | 6..358 | 173 | 20.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22093-PA | 389 | GJ22093-PA | 1..389 | 1..379 | 1349 | 66.9 | Plus |
Dvir\GJ16159-PA | 423 | GJ16159-PA | 8..179 | 7..185 | 203 | 27.3 | Plus |
Dvir\GJ10374-PA | 384 | GJ10374-PA | 280..379 | 274..373 | 156 | 37.5 | Plus |
Translation from 174 to 1313
> LD09158.hyp MLWKSLIALCVIGAAVAEQTPVFLWGANSVAKPSLKTVSQVEFAEQLAAL LEDHMVVAFEENGLSSKDFLCSNSQAQSCYAQLQGVSPKTYYTSVENPSE ALRSVAAKREHNSIDASGKLTTPAKCAVGTALFVTFEDAAESREASLESH DAAIAAISKQFECKVAYLYLAAPSTAPVVQRRTRRDTAATTGGIMWKSTN QFQIFYTALLYNGNPITVTDLKLTNSSSTKLSVVMDTSVADKPITFDVVY NGGYFSLSNLVYDNNNFRSSGVNAPTTFSYSCGNLTLESAAVNNMYNTLS FKSLQLQAPFDGTYKEDFPFGDSWDCVGFVTPGILMGLFVVALLLVIMFV GVCWMMDINTMDRFDDPKGKTITINAAAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
VhaAC45-PA | 379 | CG8029-PA | 1..379 | 1..379 | 1943 | 100 | Plus |
VhaAC45-PB | 379 | CG8029-PB | 1..379 | 1..379 | 1943 | 100 | Plus |
CG5421-PB | 426 | CG5421-PB | 10..418 | 6..367 | 183 | 21.5 | Plus |
CG5421-PA | 426 | CG5421-PA | 10..418 | 6..367 | 183 | 21.5 | Plus |
CG31030-PA | 384 | CG31030-PA | 281..379 | 273..373 | 153 | 35 | Plus |