Clone LD09306 Report

Search the DGRC for LD09306

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:93
Well:6
Vector:pBS SK-
Associated Gene/TranscriptSema-2a-RA
Protein status:LD09306.pep: gold
Preliminary Size:3068
Sequenced Size:3443

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4700 2002-06-26 Blastp of sequenced clone
CG4700 2003-01-01 Sim4 clustering to Release 3
Sema-2a 2008-04-29 Release 5.5 accounting
Sema-2a 2008-08-15 Release 5.9 accounting
Sema-2a 2008-12-18 5.12 accounting

Clone Sequence Records

LD09306.complete Sequence

3443 bp (3443 high quality bases) assembled on 2002-06-26

GenBank Submission: AY128437

> LD09306.complete
TTCCGCTCGAGATTCTTGGGCATTTTACCAGTGTTCCCTTTCGTGGCGGA
ACTTGTTTCGCATCGTTATTCGTGGGAAAAAACGTGCCGGTTTTTATTCA
TCAAACGGTAAAATCAACAAGCAACCGCCTCTCGCTCGCTCTTGCACTTT
AATCCAATTGAGGTTGGTGGGGTCGCATTCGGCCCCCGGTCGACCACCCC
TCTCGCTCGCACCGCCCTCGCAATGTCGCTTCTACAGCTATCGCCGCTCC
TCGCACTCCTGCTACTCCTCTGCAGTAGTGTGAGCGAGACAGCTGCGGAC
TACGAGAACACCTGGAACTTCTACTACGAGCGTCCCTGTTGCACTGGAAA
CGATCAGGGGAACAACAATTACGGGAAACACGGCGCAGATCATGTGCGGG
AGTTCAACTGCGGCAAGCTGTACTATCGTACATTCCATATGAACGAAGAT
CGAGATACGCTCTATGTGGGAGCCATGGATCGCGTATTCCGTGTGAACCT
GCAGAATATCTCCTCATCCAATTGTAATCGGGATGTGATCAACTTGGAGC
CAACACGGGATGATGTGGTTAGCTGCGTCTCCAAAGGCAAAAGTCAGATC
TTCGACTGCAAGAACCATGTGCGTGTCATCCAGTCAATGGACCAGGGGGA
TAGGCTCTATGTATGCGGCACCAACGCCCACAATCCCAAGGATTATGTTA
TCTATGCGAATCTAACCCACCTGCCGCGCTCGGAATATGTGATTGGCGTG
GGTCTGGGCATTGCCAAGTGCCCCTACGATCCCCTCGACAACTCAACTGC
GATTTATGTGGAGAATGGCAATCCGGGTGGTCTGCCCGGTTTGTACTCCG
GCACCAATGCGGAGTTCACCAAGGCGGATACGGTTATTTTCCGCACTGAT
CTGTATAATACTTCGGCTAAACGTTTGGAATATAAATTCAAGAGGACTCT
GAAATACGACTCCAAGTGGTTGGACAAACCAAACTTTGTCGGCTCCTTTG
ATATTGGGGAGTACGTGTATTTCTTTTTCCGTGAAACCGCCGTGGAATAC
ATCAACTGCGGCAAGGCTGTCTATTCGCGCATCGCACGGGTGTGCAAGAA
GGATGTGGGTGGAAAGAATCTGCTGGCCCACAACTGGGCCACCTACCTGA
AGGCCAGACTCAACTGCAGCATCTCCGGCGAATTTCCGTTCTATTTCAAC
GAGATCCAATCGGTCTACCAGCTGCCCTCCGATAAGAGTCGATTCTTCGC
CACATTCACGACGAGCACTAATGGCCTGATTGGATCTGCCGTATGCAGTT
TCCACATTAACGAGATTCAGGCTGCCTTCAATGGCAAATTCAAGGAGCAA
TCTTCATCGAATTCCGCATGGCTGCCGGTGCTTAACTCCCGGGTGCCGGA
ACCACGGCCGGGTACATGTGTCAACGATACATCAAACCTGCCCGATACCG
TACTGAATTTCATCAGATCCCATCCACTTATGGACAAAGCCGTAAATCAC
GAGCACAACAATCCAGTCTATTATAAAAGGGATTTGGTCTTCACCAAGCT
CGTCGTTGACAAAATTCGCATTGACATCCTCAATCAGGAATACATTGTGT
ACTATGTGGGCACCAATCTGGGTCGCATTTACAAAATCGTGCAGTACTAC
CGTAACGGAGAGTCGCTGTCCAAGCTGCTGGATATCTTCGAGGTGGCTCC
AAACGAGGCCATCCAAGTGATGGAAATCAGCCAGACACGTAAGAGCCTCT
ACATTGGCACCGATCATCGCATCAAGCAAATCGACCTGGCCATGTGCAAT
CGCCGTTACGACAACTGCTTCCGCTGCGTCCGTGATCCCTACTGCGGCTG
GGATAAGGAGGCCAATACGTGCCGACCGTACGAGCTGGATTTACTGCAGG
ATGTGGCCAATGAAACGAGTGACATTTGCGATTCGAGTGTGCTGAAAAAG
AAGATTGTGGTGACCTATGGCCAGAGTGTACATCTGGGCTGTTTCGTCAA
AATACCCGAAGTGCTGAAGAATGAGCAAGTGACCTGGTATCATCACTCCA
AGGACAAGGGACGCTACGAGATTCGTTACTCGCCGACCAAATACATTGAG
ACCACCGAACGTGGCCTGGTTGTGGTTTCCGTGAACGAAGCCGATGGTGG
TCGGTACGATTGCCATTTGGGCGGCTCGCTTTTGTGCAGCTACAACATTA
CGGTGGATGCCCACAGATGCACTCCGCCGAACAAGAGTAATGACTATCAG
AAAATCTACTCGGACTGGTGCCACGAGTTCGAGAAATACAAAACAGCAAT
GAAGTCCTGGGAAAAGAAGCAAGCGCAATGCTCGACACGGCAGAACTTCA
GCAGCAATCAGCATCCGAATGAGATTTTCCGTAAGCCCAATGTCTGATAT
CACGAAGAGAGTATCGCCCTCAAAATGCCGTCATCGTCGTCCAATCAATT
TTAGTTAATCGAAAGCGAAGAGGATAATAACAATGCGGAATAAAAAGCCC
AGGACGAGAAGAACTCATTATAATCATTATTATCAGCGACATCATCATAG
ACATACTTTCTTCAGCAATGAACAGAAAACTCTTCCTAAAGGATTATGCA
TTTACCGAAGCATTTACAATGCATCCATTGACTTAGACTTAGACATTAGG
GTATTATCGCATGACACAGCTCCTCCCATACGGTGCAATTCACCCACTTA
AATCGATTCACATAAAATACGATAACAAAAGCCACAACCCATAGTTAGTT
ACGACAATTGAACAATGAAGATACTTAAACAACTGCCGCAGAATCGCACA
TTCATATCGTTATTTGAATCTAGACTTTGATCAGTTTCAGCATAACAACG
TACGAGTATATTATATATATACAGATATCCAAACTTTGAACTTTCAAGGC
TTACTTATAAATATGGCAAACTAATGTAATCGAGAAGCAATGTGATGTTA
AGTTTTGATAAATTTATGAACAGCCTAACTAACATAATCGCCATGAACTC
GGTTTGAATGTACTATAGCGAAACAATTATAAAAATTGTACACACATGCA
TGCACATCATACGGATATATGAATCAGCCCCAAATCGAATCTAATTCTAA
AACTTAAAGGAACGATCCTTAGATAAACCTCAATCACAAGCAATACTCGC
CTAACGTGCATCTAAATACATAAATAACTCGAATCGGTCCATAGCTTATA
TACTTCACGATATATGTAACAGTGTTCAGTTGATATCTAATACGTATGTG
TACTTCAAATGCCAGTTTATATTGTAAAATCCATTCCCATCTTGCCCACA
AAAAACGATTTGGAAGATTATGATTTTTAGTGACTTGCACTCTCTTCACA
CTAAATGTACTTAAGGTAATTTGCAAAAATCTTTAGTTCTTAAGCGTTTA
GTTATAATAAAATGAGACAAAAACCAAAAAAAAAAAAAAAAAA

LD09306.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:45:03
Subject Length Description Subject Range Query Range Score Percent Strand
Sema-2a.p 3626 Sema-2a.p 265..3626 65..3426 16810 100 Plus
Sema-2a.k 3664 Sema-2a.k 201..3562 65..3426 16810 100 Plus
Sema-2a.o 3559 Sema-2a.o 199..3559 66..3426 16805 100 Plus
Sema-2a.p 3626 Sema-2a.p 70..136 1..67 335 100 Plus
Sema-2a.o 3559 Sema-2a.o 70..136 1..67 335 100 Plus
Sema-2a.k 3664 Sema-2a.k 70..135 1..66 330 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 12419608..12420705 2325..3425 5380 99.5 Plus
chr2R 21145070 chr2R 12416639..12416996 977..1334 1790 100 Plus
chr2R 21145070 chr2R 12418009..12418346 1563..1900 1675 99.7 Plus
chr2R 21145070 chr2R 12404298..12404621 65..388 1560 98.8 Plus
chr2R 21145070 chr2R 12417529..12417758 1333..1562 1150 100 Plus
chr2R 21145070 chr2R 12418506..12418675 1894..2063 835 99.4 Plus
chr2R 21145070 chr2R 12418738..12418891 2063..2216 770 100 Plus
chr2R 21145070 chr2R 12416179..12416316 706..843 690 100 Plus
chr2R 21145070 chr2R 12416387..12416520 843..976 670 100 Plus
chr2R 21145070 chr2R 12419070..12419182 2213..2325 565 100 Plus
chr2R 21145070 chr2R 12415819..12415930 595..706 560 100 Plus
chr2R 21145070 chr2R 12412659..12412750 386..477 460 100 Plus
chr2R 21145070 chr2R 12311587..12311903 982..1298 430 75.7 Plus
chr2R 21145070 chr2R 12313980..12314139 1758..1917 365 81.9 Plus
chr2R 21145070 chr2R 12414894..12414962 529..597 345 100 Plus
chr2R 21145070 chr2R 12403487..12403551 1..65 310 98.5 Plus
chr2R 21145070 chr2R 12412997..12413052 473..528 265 98.2 Plus
chr2R 21145070 chr2R 12315736..12315798 2242..2304 210 88.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:55:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:15:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16532328..16533429 2325..3426 5510 100 Plus
2R 25286936 2R 16529359..16529716 977..1334 1790 100 Plus
2R 25286936 2R 16530729..16531066 1563..1900 1690 100 Plus
2R 25286936 2R 16517018..16517341 65..388 1620 100 Plus
2R 25286936 2R 16530249..16530478 1333..1562 1150 100 Plus
2R 25286936 2R 16531226..16531395 1894..2063 850 100 Plus
2R 25286936 2R 16531458..16531611 2063..2216 770 100 Plus
2R 25286936 2R 16528899..16529036 706..843 690 100 Plus
2R 25286936 2R 16529107..16529240 843..976 670 100 Plus
2R 25286936 2R 16531790..16531902 2213..2325 565 100 Plus
2R 25286936 2R 16528539..16528650 595..706 560 100 Plus
2R 25286936 2R 16525371..16525462 386..477 460 100 Plus
2R 25286936 2R 16424300..16424616 982..1298 415 75.4 Plus
2R 25286936 2R 16426693..16426852 1758..1917 365 81.9 Plus
2R 25286936 2R 16527614..16527682 529..597 345 100 Plus
2R 25286936 2R 16516206..16516270 1..65 325 100 Plus
2R 25286936 2R 16525709..16525764 473..528 265 98.2 Plus
2R 25286936 2R 16428449..16428511 2242..2304 210 88.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:18:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 16533527..16534628 2325..3426 5510 100 Plus
2R 25260384 2R 16530558..16530915 977..1334 1790 100 Plus
2R 25260384 2R 16531928..16532265 1563..1900 1690 100 Plus
2R 25260384 2R 16518217..16518540 65..388 1620 100 Plus
2R 25260384 2R 16531448..16531677 1333..1562 1150 100 Plus
2R 25260384 2R 16532425..16532594 1894..2063 850 100 Plus
2R 25260384 2R 16532657..16532810 2063..2216 770 100 Plus
2R 25260384 2R 16530098..16530235 706..843 690 100 Plus
2R 25260384 2R 16530306..16530439 843..976 670 100 Plus
2R 25260384 2R 16532989..16533101 2213..2325 565 100 Plus
2R 25260384 2R 16529738..16529849 595..706 560 100 Plus
2R 25260384 2R 16526570..16526661 386..477 460 100 Plus
2R 25260384 2R 16427892..16428051 1758..1917 365 81.8 Plus
2R 25260384 2R 16528813..16528881 529..597 345 100 Plus
2R 25260384 2R 16517405..16517469 1..65 325 100 Plus
2R 25260384 2R 16526908..16526963 473..528 265 98.2 Plus
2R 25260384 2R 16425645..16425743 1128..1226 240 82.8 Plus
2R 25260384 2R 16429648..16429710 2242..2304 210 88.8 Plus
2R 25260384 2R 16425499..16425614 982..1097 205 78.4 Plus
2R 25260384 2R 16424698..16424768 754..824 175 83 Plus
2R 25260384 2R 16424272..16424313 654..695 165 92.8 Plus
2R 25260384 2R 16426939..16427069 1333..1463 160 74.8 Plus
2R 25260384 2R 16425236..16425298 843..905 150 82.5 Plus
Blast to na_te.dros performed 2019-03-15 22:15:07
Subject Length Description Subject Range Query Range Score Percent Strand
TART-A 13424 TART-A 13424bp 6037..6142 2842..2945 138 60.4 Plus

LD09306.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:15:51 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 12403487..12403551 1..65 98 -> Plus
chr2R 12404299..12404621 66..388 98 -> Plus
chr2R 12412662..12412749 389..476 100 -> Plus
chr2R 12413001..12413052 477..528 100 -> Plus
chr2R 12414894..12414962 529..597 100 -> Plus
chr2R 12415822..12415929 598..705 100 -> Plus
chr2R 12416179..12416316 706..843 100 -> Plus
chr2R 12416388..12416520 844..976 100 -> Plus
chr2R 12416639..12416995 977..1333 100 -> Plus
chr2R 12417530..12417758 1334..1562 100 -> Plus
chr2R 12418009..12418345 1563..1899 99 -> Plus
chr2R 12418512..12418675 1900..2063 99 -> Plus
chr2R 12418739..12418891 2064..2216 100 -> Plus
chr2R 12419074..12419182 2217..2325 100 -> Plus
chr2R 12419609..12420705 2326..3425 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:49:48 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2a-RA 1..2175 223..2397 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:19:07 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2a-RA 1..2175 223..2397 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:12:52 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2a-RB 1..2175 223..2397 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:10:11 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2a-RA 1..2175 223..2397 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:15:55 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2a-RB 1..2175 223..2397 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:49:47 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2a-RB 1..3425 1..3425 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:19:07 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2a-RB 1..3425 1..3425 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:12:52 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2a-RB 57..3481 1..3425 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:10:11 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2a-RB 1..3425 1..3425 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:15:55 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2a-RB 57..3481 1..3425 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:15:51 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16531794..16531902 2217..2325 100 -> Plus
2R 16530729..16531065 1563..1899 100 -> Plus
2R 16531232..16531395 1900..2063 100 -> Plus
2R 16531459..16531611 2064..2216 100 -> Plus
2R 16530250..16530478 1334..1562 100 -> Plus
2R 16529359..16529715 977..1333 100 -> Plus
2R 16516206..16516270 1..65 100 -> Plus
2R 16517019..16517341 66..388 100 -> Plus
2R 16525374..16525461 389..476 100 -> Plus
2R 16525713..16525764 477..528 100 -> Plus
2R 16527614..16527682 529..597 100 -> Plus
2R 16528542..16528649 598..705 100 -> Plus
2R 16528899..16529036 706..843 100 -> Plus
2R 16529108..16529240 844..976 100 -> Plus
2R 16532329..16533428 2326..3425 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:15:51 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16531794..16531902 2217..2325 100 -> Plus
2R 16530729..16531065 1563..1899 100 -> Plus
2R 16531232..16531395 1900..2063 100 -> Plus
2R 16531459..16531611 2064..2216 100 -> Plus
2R 16530250..16530478 1334..1562 100 -> Plus
2R 16529359..16529715 977..1333 100 -> Plus
2R 16516206..16516270 1..65 100 -> Plus
2R 16517019..16517341 66..388 100 -> Plus
2R 16525374..16525461 389..476 100 -> Plus
2R 16525713..16525764 477..528 100 -> Plus
2R 16527614..16527682 529..597 100 -> Plus
2R 16528542..16528649 598..705 100 -> Plus
2R 16528899..16529036 706..843 100 -> Plus
2R 16529108..16529240 844..976 100 -> Plus
2R 16532329..16533428 2326..3425 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:15:51 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16531794..16531902 2217..2325 100 -> Plus
2R 16530729..16531065 1563..1899 100 -> Plus
2R 16531232..16531395 1900..2063 100 -> Plus
2R 16531459..16531611 2064..2216 100 -> Plus
2R 16530250..16530478 1334..1562 100 -> Plus
2R 16529359..16529715 977..1333 100 -> Plus
2R 16516206..16516270 1..65 100 -> Plus
2R 16517019..16517341 66..388 100 -> Plus
2R 16525374..16525461 389..476 100 -> Plus
2R 16525713..16525764 477..528 100 -> Plus
2R 16527614..16527682 529..597 100 -> Plus
2R 16528542..16528649 598..705 100 -> Plus
2R 16528899..16529036 706..843 100 -> Plus
2R 16529108..16529240 844..976 100 -> Plus
2R 16532329..16533428 2326..3425 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:12:52 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12413218..12413269 477..528 100 -> Plus
arm_2R 12415119..12415187 529..597 100 -> Plus
arm_2R 12416047..12416154 598..705 100 -> Plus
arm_2R 12416404..12416541 706..843 100 -> Plus
arm_2R 12416613..12416745 844..976 100 -> Plus
arm_2R 12418737..12418900 1900..2063 100 -> Plus
arm_2R 12404524..12404846 66..388 100 -> Plus
arm_2R 12403711..12403775 1..65 100 -> Plus
arm_2R 12412879..12412966 389..476 100 -> Plus
arm_2R 12416864..12417220 977..1333 100 -> Plus
arm_2R 12417755..12417983 1334..1562 100 -> Plus
arm_2R 12418234..12418570 1563..1899 100 -> Plus
arm_2R 12418964..12419116 2064..2216 100 -> Plus
arm_2R 12419299..12419407 2217..2325 100 -> Plus
arm_2R 12419834..12420933 2326..3425 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:42:24 Download gff for LD09306.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16518218..16518540 66..388 100 -> Plus
2R 16526573..16526660 389..476 100 -> Plus
2R 16526912..16526963 477..528 100 -> Plus
2R 16528813..16528881 529..597 100 -> Plus
2R 16529741..16529848 598..705 100 -> Plus
2R 16530098..16530235 706..843 100 -> Plus
2R 16530307..16530439 844..976 100 -> Plus
2R 16530558..16530914 977..1333 100 -> Plus
2R 16531449..16531677 1334..1562 100 -> Plus
2R 16531928..16532264 1563..1899 100 -> Plus
2R 16532431..16532594 1900..2063 100 -> Plus
2R 16532658..16532810 2064..2216 100 -> Plus
2R 16532993..16533101 2217..2325 100 -> Plus
2R 16533528..16534627 2326..3425 100   Plus
2R 16517405..16517469 1..65 100 -> Plus

LD09306.pep Sequence

Translation from 222 to 2396

> LD09306.pep
MSLLQLSPLLALLLLLCSSVSETAADYENTWNFYYERPCCTGNDQGNNNY
GKHGADHVREFNCGKLYYRTFHMNEDRDTLYVGAMDRVFRVNLQNISSSN
CNRDVINLEPTRDDVVSCVSKGKSQIFDCKNHVRVIQSMDQGDRLYVCGT
NAHNPKDYVIYANLTHLPRSEYVIGVGLGIAKCPYDPLDNSTAIYVENGN
PGGLPGLYSGTNAEFTKADTVIFRTDLYNTSAKRLEYKFKRTLKYDSKWL
DKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL
LAHNWATYLKARLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTN
GLIGSAVCSFHINEIQAAFNGKFKEQSSSNSAWLPVLNSRVPEPRPGTCV
NDTSNLPDTVLNFIRSHPLMDKAVNHEHNNPVYYKRDLVFTKLVVDKIRI
DILNQEYIVYYVGTNLGRIYKIVQYYRNGESLSKLLDIFEVAPNEAIQVM
EISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFRCVRDPYCGWDKEANTC
RPYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKN
EQVTWYHHSKDKGRYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLG
GSLLCSYNITVDAHRCTPPNKSNDYQKIYSDWCHEFEKYKTAMKSWEKKQ
AQCSTRQNFSSNQHPNEIFRKPNV*

LD09306.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:55:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13604-PA 721 GF13604-PA 1..721 1..724 3778 96.8 Plus
Dana\GF13596-PA 742 GF13596-PA 15..736 2..719 2731 67.4 Plus
Dana\GF15536-PA 917 GF15536-PA 117..625 73..577 834 37.7 Plus
Dana\GF13235-PA 753 GF13235-PA 47..525 67..551 742 36.1 Plus
Dana\GF10396-PA 1088 GF10396-PA 66..525 67..556 689 32.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:55:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20610-PA 697 GG20610-PA 29..697 56..724 3617 99.9 Plus
Dere\GG20603-PA 783 GG20603-PA 75..777 20..719 2703 68.6 Plus
Dere\GG25296-PA 902 GG25296-PA 104..612 73..577 841 37.8 Plus
Dere\GG21030-PA 769 GG21030-PA 60..537 67..551 760 37 Plus
Dere\GG13858-PA 1097 GG13858-PA 72..534 67..556 710 33.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:55:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21241-PA 701 GH21241-PA 33..701 56..724 3506 95.8 Plus
Dgri\GH21236-PA 735 GH21236-PA 4..729 7..719 2711 66.9 Plus
Dgri\GH21142-PA 762 GH21142-PA 44..528 67..551 745 34.3 Plus
Dgri\GH11272-PA 774 GH11272-PA 123..514 207..577 737 41.8 Plus
Dgri\GH16920-PA 1061 GH16920-PA 39..506 67..559 724 33.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:44
Subject Length Description Subject Range Query Range Score Percent Strand
Sema2a-PE 724 CG4700-PE 1..724 1..724 3914 100 Plus
Sema2a-PA 724 CG4700-PA 1..724 1..724 3914 100 Plus
Sema2a-PB 724 CG4700-PB 1..724 1..724 3914 100 Plus
Sema2a-PC 697 CG4700-PC 29..697 56..724 3613 100 Plus
Sema2b-PD 824 CG33960-PD 59..779 3..719 2722 67.4 Plus
Sema2b-PB 785 CG33960-PB 59..779 3..719 2722 67.4 Plus
Sema2b-PA 784 CG33960-PA 59..778 3..719 2717 67.4 Plus
Sema2b-PC 784 CG33960-PC 59..778 3..719 2717 67.4 Plus
Sema1a-PI 817 CG18405-PI 100..608 73..577 835 37.7 Plus
Sema1a-PH 820 CG18405-PH 100..608 73..577 835 37.7 Plus
Sema1a-PF 826 CG18405-PF 100..608 73..577 835 37.7 Plus
Sema1a-PA 899 CG18405-PA 100..608 73..577 835 37.7 Plus
Sema1a-PE 905 CG18405-PE 100..608 73..577 835 37.7 Plus
Sema1a-PD 905 CG18405-PD 100..608 73..577 835 37.7 Plus
Sema1a-PG 1131 CG18405-PG 100..608 73..577 835 37.7 Plus
Sema1b-PC 770 CG6446-PC 60..538 67..551 734 36 Plus
Sema1b-PB 770 CG6446-PB 60..538 67..551 734 36 Plus
Sema1b-PA 770 CG6446-PA 60..538 67..551 734 36 Plus
Sema5c-PB 1091 CG5661-PB 70..528 67..556 688 33.6 Plus
Sema5c-PA 1093 CG5661-PA 72..530 67..556 688 33.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:55:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20528-PA 720 GI20528-PA 4..720 5..724 3629 93.6 Plus
Dmoj\GI20523-PA 749 GI20523-PA 23..710 20..706 2715 69.7 Plus
Dmoj\GI21441-PA 865 GI21441-PA 66..574 73..577 855 38.6 Plus
Dmoj\GI18743-PA 782 GI18743-PA 66..547 67..551 751 35.1 Plus
Dmoj\GI13674-PA 1081 GI13674-PA 63..539 67..569 703 33 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:55:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10746-PA 658 GL10746-PA 17..658 18..724 3211 86.1 Plus
Dper\GL10736-PA 465 GL10736-PA 49..462 20..434 1670 72.8 Plus
Dper\GL25556-PA 905 GL25556-PA 104..579 75..553 843 39.1 Plus
Dper\GL10737-PA 206 GL10737-PA 1..200 524..719 775 65.5 Plus
Dper\GL17680-PA 773 GL17680-PA 64..542 67..551 754 36 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:55:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24470-PA 722 GA24470-PA 17..722 18..724 3721 97 Plus
Dpse\GA30014-PB 766 GA30014-PB 46..736 20..711 2719 69.7 Plus
Dpse\Sema-1a-PA 838 GA14922-PA 35..512 73..553 842 38.9 Plus
Dpse\GA19600-PA 774 GA19600-PA 65..543 67..551 758 36 Plus
Dpse\GA23503-PA 1094 GA23503-PA 71..530 67..556 727 34.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:55:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21705-PA 697 GM21705-PA 29..697 56..724 3609 99.7 Plus
Dsec\GM21695-PA 784 GM21695-PA 76..778 20..719 2719 68.6 Plus
Dsec\GM17077-PA 897 GM17077-PA 100..608 73..577 840 37.9 Plus
Dsec\GM19960-PA 770 GM19960-PA 60..538 67..551 742 35.6 Plus
Dsec\GM24682-PA 1378 GM24682-PA 353..815 67..556 709 33.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 04:55:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11202-PA 697 GD11202-PA 29..697 56..724 3615 99.9 Plus
Dsim\GD11191-PA 784 GD11191-PA 76..778 20..719 2718 68.6 Plus
Dsim\GD23556-PA 897 GD23556-PA 100..608 73..577 840 37.9 Plus
Dsim\GD25452-PA 579 GD25452-PA 60..538 67..551 752 36 Plus
Dsim\GD12751-PA 1097 GD12751-PA 72..534 67..556 722 33.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:55:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22377-PA 701 GJ22377-PA 33..701 56..724 3525 96.4 Plus
Dvir\GJ22373-PA 744 GJ22373-PA 5..714 1..706 2717 68.5 Plus
Dvir\GJ11247-PA 868 GJ11247-PA 42..574 50..577 857 38 Plus
Dvir\GJ21763-PA 757 GJ21763-PA 50..522 73..551 757 35.2 Plus
Dvir\GJ14011-PA 1098 GJ14011-PA 71..533 67..554 703 32.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:55:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21702-PA 721 GK21702-PA 16..721 17..724 3674 95.3 Plus
Dwil\GK21697-PA 731 GK21697-PA 21..717 20..716 2719 69.4 Plus
Dwil\GK18750-PA 851 GK18750-PA 51..559 73..577 843 38 Plus
Dwil\GK15918-PA 775 GK15918-PA 66..539 67..551 762 36.7 Plus
Dwil\GK17220-PA 1098 GK17220-PA 60..523 67..556 680 33.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:55:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11800-PA 697 GE11800-PA 29..697 56..724 3616 99.9 Plus
Dyak\GE11790-PA 783 GE11790-PA 75..777 20..719 2717 68.6 Plus
Dyak\GE18787-PA 901 GE18787-PA 102..610 73..577 842 37.8 Plus
Dyak\GE13973-PA 770 GE13973-PA 60..538 67..551 751 35.8 Plus
Dyak\GE20151-PA 1088 GE20151-PA 63..525 67..556 716 33.4 Plus

LD09306.hyp Sequence

Translation from 222 to 2396

> LD09306.hyp
MSLLQLSPLLALLLLLCSSVSETAADYENTWNFYYERPCCTGNDQGNNNY
GKHGADHVREFNCGKLYYRTFHMNEDRDTLYVGAMDRVFRVNLQNISSSN
CNRDVINLEPTRDDVVSCVSKGKSQIFDCKNHVRVIQSMDQGDRLYVCGT
NAHNPKDYVIYANLTHLPRSEYVIGVGLGIAKCPYDPLDNSTAIYVENGN
PGGLPGLYSGTNAEFTKADTVIFRTDLYNTSAKRLEYKFKRTLKYDSKWL
DKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL
LAHNWATYLKARLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTN
GLIGSAVCSFHINEIQAAFNGKFKEQSSSNSAWLPVLNSRVPEPRPGTCV
NDTSNLPDTVLNFIRSHPLMDKAVNHEHNNPVYYKRDLVFTKLVVDKIRI
DILNQEYIVYYVGTNLGRIYKIVQYYRNGESLSKLLDIFEVAPNEAIQVM
EISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFRCVRDPYCGWDKEANTC
RPYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKN
EQVTWYHHSKDKGRYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLG
GSLLCSYNITVDAHRCTPPNKSNDYQKIYSDWCHEFEKYKTAMKSWEKKQ
AQCSTRQNFSSNQHPNEIFRKPNV*

LD09306.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:01:06
Subject Length Description Subject Range Query Range Score Percent Strand
Sema-2a-PE 724 CG4700-PE 1..724 1..724 3914 100 Plus
Sema-2a-PA 724 CG4700-PA 1..724 1..724 3914 100 Plus
Sema-2a-PB 724 CG4700-PB 1..724 1..724 3914 100 Plus
Sema-2a-PC 697 CG4700-PC 29..697 56..724 3613 100 Plus
Sema-2b-PD 824 CG33960-PD 59..779 3..719 2722 67.4 Plus