BDGP Sequence Production Resources |
Search the DGRC for LD09376
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 93 |
Well: | 76 |
Vector: | pBS SK- |
Associated Gene/Transcript | sta-RA |
Protein status: | LD09376.pep: gold |
Preliminary Size: | 1168 |
Sequenced Size: | 1104 |
Gene | Date | Evidence |
---|---|---|
CG14792 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14792 | 2002-05-18 | Blastp of sequenced clone |
CG14792 | 2003-01-01 | Sim4 clustering to Release 3 |
sta | 2008-04-29 | Release 5.5 accounting |
sta | 2008-08-15 | Release 5.9 accounting |
sta | 2008-12-18 | 5.12 accounting |
1104 bp (1104 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118899
> LD09376.complete CTGCGTCGGAGTGAAAAAACCGAAAAAGTCGGAACGCGTCGCGATACGGA AAAAAACCGTTTAACGCGAACGCAACACCGATTCTCTGCATGCCAACGTC GCCAACTTCAACCCGGAAATCGGCCATTTTGTCAAAACTCCCAGCGGCAT CTAGACGTCCGTAACTCTTTCCACGTTAACATGTCGGGAGGCTTAGATAT TCTGTCCCTCAAGGAGGACGACATCACCAAGATGTTGGTGGCCACCACCC ATCTGGGTTCCGAGAACGTCAACTTCCAGATGGAGCAGTACGTGTACAAG CGCCGCGCTGATGGCGTCAACATCCTCAACCTGGGCAAGACCTGGGAGAA GCTGCAGCTGGCGGCCCGCGCCATCGTGGCCATCGATAACCCCTCGGACA TCTTCGTCATCTCGTCGCGTCCGATCGGCCAGCGCGCGGTGCTGAAGTTC GCCAAGTACACCGACACCACTCCGATCGCCGGCCGCTTCACGCCCGGTGC CTTCACCAACCAGATCCAGCCCGCTTTCCGCGAGCCGCGTCTGCTGGTGG TGACCGACCCCAACACCGATCACCAGCCCATCATGGAGGCCAGCTACGTG AACATCCCCGTGATTGCCTTCACGAACACCGACTCGCCTCTGCGCTACAT CGACATTGCCATTCCGTGCAACAACAAGTCGGCCCACTCTATCGGTCTGA TGTGGTGGCTGTTGGCCCGCGAAGTGCTCCGCCTGCGTGGCACCATCTCT CGCAGCGTCGAGTGGCCCGTAGTCGTCGATCTGTTCTTCTACCGCGATCC CGAGGAGGCCGAGAAGGAGGAGGCCGCCGCCAAGGAGCTGTTGCCGCCAC CCAAGATTGAGGAGGCCGTCGACCACCCGGTCGAGGAGACCACCAACTGG GCCGATGAGGTTGCCGCCGAGACCGTTGGCGGAGTGGAGGACTGGAACGA GGACACCGTCAAGACCTCCTGGGGTAGCGACGGCCAGTTCTAAGGAATCG TCCGGGCCACAGATGGCACTACATCAGCACAGCGTTTTGTCAGGAGCCTT TTCAACGGCATAAATAAACAGCTGTTTATATCTAAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sta.c | 1972 | sta.c | 748..1833 | 1..1086 | 5430 | 100 | Plus |
sta-RB | 1381 | sta-RB | 157..1242 | 1..1086 | 5430 | 100 | Plus |
sta-RA | 1232 | sta-RA | 304..1232 | 157..1085 | 4645 | 100 | Plus |
sta-RA | 1232 | sta-RA | 1..158 | 1..158 | 790 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1375691..1376374 | 1083..400 | 3405 | 99.9 | Minus |
chrX | 22417052 | chrX | 1376567..1376809 | 399..157 | 1200 | 99.6 | Minus |
chrX | 22417052 | chrX | 1377150..1377307 | 158..1 | 790 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1375691..1376374 | 400..1083 | 99 | <- | Minus |
chrX | 1376567..1376809 | 157..399 | 99 | <- | Minus |
chrX | 1377152..1377307 | 1..156 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sta-RD | 100..942 | 150..993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sta-RD | 100..942 | 150..993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sta-RB | 1..813 | 181..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sta-RD | 100..942 | 150..993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sta-RB | 1..813 | 181..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sta-RB | 1..1083 | 1..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sta-RB | 1..1083 | 1..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sta-RB | 1..1083 | 1..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sta-RB | 1..1083 | 1..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sta-RB | 1..1083 | 1..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1483258..1483413 | 1..156 | 100 | Minus | |
X | 1482673..1482915 | 157..399 | 100 | <- | Minus |
X | 1481797..1482480 | 400..1083 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1483258..1483413 | 1..156 | 100 | Minus | |
X | 1482673..1482915 | 157..399 | 100 | <- | Minus |
X | 1481797..1482480 | 400..1083 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1483258..1483413 | 1..156 | 100 | Minus | |
X | 1482673..1482915 | 157..399 | 100 | <- | Minus |
X | 1481797..1482480 | 400..1083 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1375830..1376513 | 400..1083 | 100 | <- | Minus |
arm_X | 1376706..1376948 | 157..399 | 100 | <- | Minus |
arm_X | 1377291..1377446 | 1..156 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1489895..1490578 | 400..1083 | 100 | <- | Minus |
X | 1490771..1491013 | 157..399 | 100 | <- | Minus |
X | 1491356..1491511 | 1..156 | 100 | Minus |
Translation from 0 to 992
> LD09376.hyp LRRSEKTEKVGTRRDTEKNRLTRTQHRFSACQRRQLQPGNRPFCQNSQRH LDVRNSFHVNMSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYK RRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRAVLKF AKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYV NIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTIS RSVEWPVVVDLFFYRDPEEAEKEEAAAKELLPPPKIEEAVDHPVEETTNW ADEVAAETVGGVEDWNEDTVKTSWGSDGQF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sta-PF | 270 | CG14792-PF | 1..270 | 61..330 | 1409 | 100 | Plus |
sta-PE | 270 | CG14792-PE | 1..270 | 61..330 | 1409 | 100 | Plus |
sta-PB | 270 | CG14792-PB | 1..270 | 61..330 | 1409 | 100 | Plus |
sta-PA | 270 | CG14792-PA | 1..270 | 61..330 | 1409 | 100 | Plus |
Translation from 180 to 992
> LD09376.pep MSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILN LGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIA GRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNT DSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVD LFFYRDPEEAEKEEAAAKELLPPPKIEEAVDHPVEETTNWADEVAAETVG GVEDWNEDTVKTSWGSDGQF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21363-PA | 270 | GF21363-PA | 1..270 | 1..270 | 1423 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\sta-PA | 270 | GG12694-PA | 1..270 | 1..270 | 1426 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17574-PA | 272 | GH17574-PA | 1..272 | 1..270 | 1299 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sta-PF | 270 | CG14792-PF | 1..270 | 1..270 | 1409 | 100 | Plus |
sta-PE | 270 | CG14792-PE | 1..270 | 1..270 | 1409 | 100 | Plus |
sta-PB | 270 | CG14792-PB | 1..270 | 1..270 | 1409 | 100 | Plus |
sta-PA | 270 | CG14792-PA | 1..270 | 1..270 | 1409 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16040-PA | 271 | GI16040-PA | 1..271 | 1..270 | 1381 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14373-PA | 270 | GL14373-PA | 1..270 | 1..270 | 1399 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13249-PA | 270 | GA13249-PA | 1..270 | 1..270 | 1399 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18969-PA | 270 | GM18969-PA | 1..270 | 1..270 | 1432 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\sta-PA | 133 | GD16420-PA | 1..75 | 1..75 | 388 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15549-PA | 271 | GJ15549-PA | 1..271 | 1..270 | 1381 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14587-PA | 270 | GK14587-PA | 1..270 | 1..270 | 1389 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\sta-PA | 270 | GE16523-PA | 1..270 | 1..270 | 1432 | 100 | Plus |