BDGP Sequence Production Resources |
Search the DGRC for LD09531
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 95 |
Well: | 31 |
Vector: | pBS SK- |
Associated Gene/Transcript | Larp7-RA |
Protein status: | LD09531.pep: gold |
Preliminary Size: | 2035 |
Sequenced Size: | 2050 |
Gene | Date | Evidence |
---|---|---|
CG12058 | 2001-01-01 | Release 2 assignment |
CG12058 | 2001-10-10 | Blastp of sequenced clone |
CG12058 | 2003-01-01 | Sim4 clustering to Release 3 |
mxc | 2008-04-29 | Release 5.5 accounting |
mxc | 2008-08-15 | Release 5.9 accounting |
mxc | 2008-12-18 | 5.12 accounting |
2050 bp (2050 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061107
> LD09531.complete ATTTTATTCGAGTGACTTAGATTACTGGTTAACTGGCACTCAATGGCTGC CAAGAGTATCGAGAAGGAGAAGGGCGAGGGTCAGGAGCCCGCGACATCAG CGGAGAAACCCGATCCAGCCGCACCCACTGAACCAGCTGAGGAAAATTCC AAAGAACCGGCGCCGGAAGACGCATCGCCGGATAAAAAGGATGGTGGACG CAAAAGGAAGAGGCATTTGTTCAATTCGATTCGCGGTCAAATGGAATTCT ACTTCGGTGACGCCAACTTGAGCAAGGATCGCTTCCTTCGGCGCTACGTA GAGCAGGATCCATATGTACCATTGGAAATCTTTCTCACTTTCAATAAGAT AAAGACGCTCACCCAGGATGTGCAGCAGATAGCCAAGGCACTAAGCAACT CCCAGCTTCTGGAGCTGGATGAGACCGAACTAAAGGTCAAGCGACGTACC AAGCTACCAGATCAGCGCGATGTCAACGACAAAACCTTGTATGTAGAGGC CCTGCCTGCAAATGCCACTCACGATTGGCTGAAGGAGGTATTCAGCCGCT ACGGACCGGTGGCCTACGTGTCCCTGCCCCACTATCCGGGCACTAAGAAG ATCAAGGAATTTGCCTTTATCGAGTTCGAAAAGAGCGGGTCCTTGGAGAA AGCTGTGAAGGCTTTTGCCCAGATACAGGGCGTTTTGTCCGTAGAAACCG ATCCCAGTGATCTGGCCAGTGTGCGCTCCTTTCAGCAGCAGCAGCAGATA CAACAGAAAGCGGAGCAGCCGCAGTCAGAGGCTGAACAGGTTGAGTTGCC AAAGCGAAATCTAAAAAGGGAGGCCACCGACAAGGATCGCGAGGAGATAC ACGAGGTGAAACGGGTTAAGTTGGAGGAGGGCCAGCCTAGCGAGACCTCT ACAGCTGGGGAAACAGCGAGTGAAACGGATGCAGAGGGCACAGCCGAAGC CTCCGAGCAGGAGGACAAAACAGAGGCAACCGATGGCGATGAAGCTGCCA AAAAGCGCCGTCGCAAGCGCAAGAAGAAGGCGATCGTGGACAAGCCAAAC ATTGAGCCCAGTGCCCTGGAGCTCAAGGTGCTACCCAAGACTAGTTGGAG CAGTATGCGCAATAAGTACTTGAATCTACAGCGTCGCATCGTCAGTGAGG CAAAGAGCAAGCTGTGGCGAGAAAATCACCCACAAAATCAGCAGCACCCT CACCACCAGCAGACCAGTCATCCAAACCATCCGAAACCTTCACAGCTGCC CGAGGCAGTTAAAGAGGAGGAAACCGGAGGCGAGGTCCCTAGCGATGGCG GTGAAGGTGCCGTAGAAGCAGCGCCTGTGCCAGCCAAGCGTCGCAAGGCG GTGCACAAGATGAACATGAATTTCTACGGCGCCGGCGGCGTGGAATCCAC CAAATCCGAAGAACCTTCGCAGGAACGCACGCCGCTCTTTAAATACGAGC CCGGGCTGATTGTGGAGTGCTCCCTGCTAAAACCATGCACCAATGTTAAA GAATTTAAGGCTGAAATGCGCCAATATCCGGATATTAAATATGTGGATAT TAAGGAGGGCGACCAAGTGGCCCTACTACGTTTGGGCACGCCTGCCGCAG CCGAGGAACTGCTACGCCAGGTCAACTGCTCCGAGAGGCAGCTGAAAGTG CTCTCTGGCCAGCAGGAGACGCTCTATTGGCGAAAAATCGAGCAGGATCG CGAGGCGAAACTCTCGAAAAAGGTGCGCGTGCAGCAAAAACGCGGTCGCG AGAAAGTGGGCAAAATGCTGGGCAAGCACATTAAGTTTGATGATGGCGAT GATGAAGTGCAGGCGGCCGCCATGGACTGAGTCACTTTCAGTTGAGGGGT GAGTTTGGATTTCATTTCAGGAAACTCTATAATATAAGCTATATAAATTT ATAAATGTAAGCAAAAGATACATTTAGATCTAGCACAAGATTTCGTAATA TTAGAGTAATATTGTAAAAACAAATTGAATTTTTAAAAAAGAAACTTCCT AGTGAAATTGAAATAAATCTTCTGAATGAAACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42569-RA | 2105 | CG42569-RA | 69..2103 | 1..2035 | 10175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9135651..9135963 | 1..313 | 100 | -> | Plus |
chrX | 9136024..9137743 | 314..2032 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mxc-RA | 1..1788 | 43..1830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42569-RA | 1..1788 | 43..1830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Larp7-RA | 1..1788 | 43..1830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mxc-RA | 1..1788 | 43..1830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Larp7-RA | 1..1788 | 43..1830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mxc-RA | 10..2041 | 1..2032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42569-RA | 10..2041 | 1..2032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Larp7-RA | 18..2049 | 1..2032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mxc-RA | 10..2041 | 1..2032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Larp7-RA | 18..2049 | 1..2032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9243834..9244146 | 1..313 | 100 | -> | Plus |
X | 9244207..9245925 | 314..2032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9243834..9244146 | 1..313 | 100 | -> | Plus |
X | 9244207..9245925 | 314..2032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9243834..9244146 | 1..313 | 100 | -> | Plus |
X | 9244207..9245925 | 314..2032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9137867..9138179 | 1..313 | 100 | -> | Plus |
arm_X | 9138240..9139958 | 314..2032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9251932..9252244 | 1..313 | 100 | -> | Plus |
X | 9252305..9254023 | 314..2032 | 100 | Plus |
Translation from 42 to 1829
> LD09531.pep MAAKSIEKEKGEGQEPATSAEKPDPAAPTEPAEENSKEPAPEDASPDKKD GGRKRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTF NKIKTLTQDVQQIAKALSNSQLLELDETELKVKRRTKLPDQRDVNDKTLY VEALPANATHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSGS LEKAVKAFAQIQGVLSVETDPSDLASVRSFQQQQQIQQKAEQPQSEAEQV ELPKRNLKREATDKDREEIHEVKRVKLEEGQPSETSTAGETASETDAEGT AEASEQEDKTEATDGDEAAKKRRRKRKKKAIVDKPNIEPSALELKVLPKT SWSSMRNKYLNLQRRIVSEAKSKLWRENHPQNQQHPHHQQTSHPNHPKPS QLPEAVKEEETGGEVPSDGGEGAVEAAPVPAKRRKAVHKMNMNFYGAGGV ESTKSEEPSQERTPLFKYEPGLIVECSLLKPCTNVKEFKAEMRQYPDIKY VDIKEGDQVALLRLGTPAAAEELLRQVNCSERQLKVLSGQQETLYWRKIE QDREAKLSKKVRVQQKRGREKVGKMLGKHIKFDDGDDEVQAAAMD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19208-PA | 607 | GF19208-PA | 7..593 | 13..582 | 2059 | 72.8 | Plus |
Dana\GF15376-PA | 391 | GF15376-PA | 22..202 | 25..196 | 198 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18304-PA | 595 | GG18304-PA | 1..595 | 1..595 | 2634 | 91.3 | Plus |
Dere\GG21576-PA | 390 | GG21576-PA | 53..202 | 62..196 | 191 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12028-PA | 620 | GH12028-PA | 4..598 | 9..589 | 1771 | 61 | Plus |
Dgri\GH13748-PA | 392 | GH13748-PA | 19..205 | 3..197 | 185 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Larp7-PA | 595 | CG42569-PA | 1..595 | 1..595 | 3059 | 100 | Plus |
La-PA | 390 | CG10922-PA | 2..350 | 17..334 | 240 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14301-PA | 613 | GI14301-PA | 1..599 | 1..589 | 1727 | 60 | Plus |
Dmoj\GI17890-PA | 390 | GI17890-PA | 53..203 | 62..197 | 178 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18292-PA | 102 | GL18292-PA | 1..97 | 1..97 | 268 | 59.4 | Plus |
Dper\GL26419-PA | 391 | GL26419-PA | 55..204 | 62..196 | 191 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11366-PA | 626 | GA11366-PA | 1..616 | 1..593 | 1937 | 66.8 | Plus |
Dpse\GA27844-PA | 226 | GA27844-PA | 1..214 | 67..297 | 776 | 70.4 | Plus |
Dpse\GA27845-PA | 510 | GA27845-PA | 1..208 | 67..291 | 753 | 70.5 | Plus |
Dpse\GA27853-PA | 641 | GA27853-PA | 1..208 | 67..291 | 746 | 70 | Plus |
Dpse\GA27847-PA | 216 | GA27847-PA | 1..204 | 67..293 | 715 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22404-PA | 113 | GM22404-PA | 1..106 | 1..106 | 524 | 92.5 | Plus |
Dsec\GM23332-PA | 390 | GM23332-PA | 53..202 | 62..196 | 189 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24774-PA | 104 | GD24774-PA | 1..104 | 492..595 | 510 | 93.3 | Plus |
Dsim\GD21707-PA | 390 | GD21707-PA | 53..202 | 62..196 | 188 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19358-PA | 620 | GJ19358-PA | 1..606 | 1..589 | 1798 | 62.4 | Plus |
Dvir\GJ17394-PA | 392 | GJ17394-PA | 55..205 | 62..197 | 180 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25140-PA | 633 | GK25140-PA | 19..628 | 11..592 | 1812 | 62.6 | Plus |
Dwil\GK25043-PA | 172 | GK25043-PA | 58..167 | 484..592 | 379 | 68.2 | Plus |
Dwil\GK25043-PA | 172 | GK25043-PA | 11..63 | 37..90 | 209 | 72.2 | Plus |
Dwil\GK18125-PA | 404 | GK18125-PA | 64..277 | 62..254 | 190 | 28.3 | Plus |
Translation from 42 to 1829
> LD09531.hyp MAAKSIEKEKGEGQEPATSAEKPDPAAPTEPAEENSKEPAPEDASPDKKD GGRKRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTF NKIKTLTQDVQQIAKALSNSQLLELDETELKVKRRTKLPDQRDVNDKTLY VEALPANATHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSGS LEKAVKAFAQIQGVLSVETDPSDLASVRSFQQQQQIQQKAEQPQSEAEQV ELPKRNLKREATDKDREEIHEVKRVKLEEGQPSETSTAGETASETDAEGT AEASEQEDKTEATDGDEAAKKRRRKRKKKAIVDKPNIEPSALELKVLPKT SWSSMRNKYLNLQRRIVSEAKSKLWRENHPQNQQHPHHQQTSHPNHPKPS QLPEAVKEEETGGEVPSDGGEGAVEAAPVPAKRRKAVHKMNMNFYGAGGV ESTKSEEPSQERTPLFKYEPGLIVECSLLKPCTNVKEFKAEMRQYPDIKY VDIKEGDQVALLRLGTPAAAEELLRQVNCSERQLKVLSGQQETLYWRKIE QDREAKLSKKVRVQQKRGREKVGKMLGKHIKFDDGDDEVQAAAMD*