BDGP Sequence Production Resources |
Search the DGRC for LD09536
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 95 |
Well: | 36 |
Vector: | pBS SK- |
Associated Gene/Transcript | nero-RA |
Protein status: | LD09536.pep: gold |
Preliminary Size: | 1214 |
Sequenced Size: | 1092 |
Gene | Date | Evidence |
---|---|---|
CG2245 | 2001-01-01 | Release 2 assignment |
CG2245 | 2002-05-17 | Blastp of sequenced clone |
CG2245 | 2003-01-01 | Sim4 clustering to Release 3 |
l(3)s1921 | 2008-04-29 | Release 5.5 accounting |
l(3)s1921 | 2008-08-15 | Release 5.9 accounting |
l(3)s1921 | 2008-12-18 | 5.12 accounting |
1092 bp (1092 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118500
> LD09536.complete CCCGTTGCAGTTTTTTATTTATAAGTCCACACCGCATACAAATGGTTTCG CAGCAGCAAATCGAGGCCATTGGAGGCGTTCTGAACAACAAGGAACGCCC ACTGAAAGAGCGCTTTCGAGCCCTCTTCACGCTGAAGAACATCGGCGGAG GAGCGGCCATCGAGGCGATCAGCAAAGCCTTTGACGATGATTCGGCCCTT CTCAAACATGAGCTGGCCTACTGCTTGGGTCAGATGCAGGACGCACAGGC GTTAGACATCCTCACCAAGGTGCTAAAGGACACCACCCAGGAGCCGATGG TGCGCCACGAGGCTGCGGAGGCCATGGGCGCCATTGGTCATCCAGATGTG CTGCCAATTCTGGAGGAGTACAAACAAGATCCGGTAGTGGAGGTGGCCGA AACATGTGCCATTGCTCTGGACCGCGTCCGCTGGCTGCAGAGTGGCCAAA AGGTAGATGACAGCAACCCTTACGCCTCCGTTGATCCCTCACCGCCAACT GCGGGCGACAAGAGCGTCACCGAGCTGAAGGCCATCTATCTGGATGCCCA GCAGAGCCTGTTCGATCGATATAGGGCCATGTTCAGCCTGCGCAATCTGC GCACCGAAGAGAGTGTCTTGGCCATTGCCGAGGGACTTAAGGACTCTTCC GCCCTCTTCCGCCACGAGGTGGCCTTCGTACTGGGCCAGCTGCAAGAACC CTGCAGCATTCCCTTCCTTCAAGAGAATCTGGAGGATCGCCTGGAAAACG AAATGGTGCGTCACGAGTGTGCCGAGGCCCTTGGCGCCATCGCCACAGAG GACTGCATTCAGATCTTGAACCGCTACGCCGAGGACGACAAGCGCGTGGT CAAGGAGAGCTGCGTCATCGCCCTGGACATGTGCGAGTACGAGAACAGTC CGGAGTTCCAATATGCCGACGGCCTAGCCAAACTAGACGCGACCAAGTGA TTTTCGCCGAACATTTGCATCTACCAGCTGTGTATATATTAGTCGTAAAC TTGTATTGTTTTGTCACTTCTGTGATCACATGGACCTAATCTTATCGAGA CATAAAAAGAAATTTGAACGTGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(3)s1921-RA | 1085 | l(3)s1921-RA | 14..1085 | 1..1072 | 5360 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 27568796..27569867 | 1072..1 | 5360 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 31746444..31747516 | 1073..1 | 5365 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 31487275..31488347 | 1073..1 | 5365 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 27568796..27569867 | 1..1072 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)s1921-RA | 1..909 | 42..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nero-RA | 1..909 | 42..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nero-RA | 1..909 | 42..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)s1921-RA | 1..909 | 42..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nero-RA | 1..909 | 42..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)s1921-RA | 14..1085 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nero-RA | 14..1085 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nero-RA | 43..1114 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)s1921-RA | 14..1085 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nero-RA | 43..1114 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31746445..31747516 | 1..1072 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31746445..31747516 | 1..1072 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31746445..31747516 | 1..1072 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 27572167..27573238 | 1..1072 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31487276..31488347 | 1..1072 | 100 | Minus |
Translation from 2 to 949
> LD09536.hyp RCSFLFISPHRIQMVSQQQIEAIGGVLNNKERPLKERFRALFTLKNIGGG AAIEAISKAFDDDSALLKHELAYCLGQMQDAQALDILTKVLKDTTQEPMV RHEAAEAMGAIGHPDVLPILEEYKQDPVVEVAETCAIALDRVRWLQSGQK VDDSNPYASVDPSPPTAGDKSVTELKAIYLDAQQSLFDRYRAMFSLRNLR TEESVLAIAEGLKDSSALFRHEVAFVLGQLQEPCSIPFLQENLEDRLENE MVRHECAEALGAIATEDCIQILNRYAEDDKRVVKESCVIALDMCEYENSP EFQYADGLAKLDATK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nero-PA | 302 | CG2245-PA | 1..302 | 14..315 | 1535 | 100 | Plus |
Translation from 41 to 949
> LD09536.pep MVSQQQIEAIGGVLNNKERPLKERFRALFTLKNIGGGAAIEAISKAFDDD SALLKHELAYCLGQMQDAQALDILTKVLKDTTQEPMVRHEAAEAMGAIGH PDVLPILEEYKQDPVVEVAETCAIALDRVRWLQSGQKVDDSNPYASVDPS PPTAGDKSVTELKAIYLDAQQSLFDRYRAMFSLRNLRTEESVLAIAEGLK DSSALFRHEVAFVLGQLQEPCSIPFLQENLEDRLENEMVRHECAEALGAI ATEDCIQILNRYAEDDKRVVKESCVIALDMCEYENSPEFQYADGLAKLDA TK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23253-PA | 302 | GF23253-PA | 1..302 | 1..302 | 1537 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11857-PA | 302 | GG11857-PA | 1..302 | 1..302 | 1576 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14125-PA | 302 | GH14125-PA | 1..302 | 1..302 | 1310 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nero-PA | 302 | CG2245-PA | 1..302 | 1..302 | 1535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10655-PA | 302 | GI10655-PA | 1..302 | 1..302 | 1458 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23526-PA | 302 | GL23526-PA | 1..302 | 1..302 | 1459 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15318-PA | 302 | GA15318-PA | 1..302 | 1..302 | 1464 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16420-PA | 302 | GM16420-PA | 1..302 | 1..302 | 1584 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16326-PA | 302 | GD16326-PA | 1..302 | 1..302 | 1581 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23012-PA | 302 | GJ23012-PA | 1..302 | 1..302 | 1461 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14046-PA | 304 | GK14046-PA | 4..304 | 2..302 | 1438 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23304-PA | 302 | GE23304-PA | 1..302 | 1..302 | 1577 | 98 | Plus |