BDGP Sequence Production Resources |
Search the DGRC for LD09680
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 96 |
Well: | 80 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG7192-RA |
Protein status: | LD09680.pep: gold |
Sequenced Size: | 2165 |
Gene | Date | Evidence |
---|---|---|
CG7192 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7192 | 2004-10-13 | Blastp of sequenced clone |
CG7192 | 2008-04-29 | Release 5.5 accounting |
CG7192 | 2008-08-15 | Release 5.9 accounting |
CG7192 | 2008-12-18 | 5.12 accounting |
2165 bp (2165 high quality bases) assembled on 2004-10-13
GenBank Submission: BT016115
> LD09680.complete CTCCAACAAATCAGTGTATTTTTTGTTGTTCTTTGCCAAACAATAGAAGA CGAACGTACTCGGAAGTAAATTAAACAAAATCGGGCGACCGGATCGGGCG TTAATCGTTAATTGTTCAATTAAATGCAGCTTATTAGGCGCCGGGCTGCA TAGTGCGATCGCAGAGTCACCGAGTGGACCGGGCCCCCTGGCGCTATAGT CGCAATCCGAACCCGAATCGCTCCATCGGGAATCTTTAATTGTGAATCCG AGCGATGAACAAAGTGGGCAAGCACATTCAAAGCGGCATCGGTGGAGCAC CCAACGCGGCATTGTCCACGGCGGCTCTACTGGGTACTCCGCTGGAGGCG ACCAATGGTGCTGGCTCGACCAGCACCACCAATGTATTCAATTCCATCAT GAGCTTTCTGCCGGACAATCGACCCATCACCTCGCTGCACATCGTCGAGG ATTTCGAGCGCTGCCCGAAGAACTTCAGTGCCATAAGCCGCACCTACGAC CAGGATTCGGATGCGGACCTATGGCGCGACTACAGCCTGTTTGGACGCCA GAACACACGCTACCTCTGCCTGTCCAAGTCCGAGGGCCTGCCGGAATACG TGGTGGAGACCCTACAAGTGATTTCGGATAAAACGCCGCCGCCCAAGGAA TTCTCGCAGGTCTCCCGCACTGCCGATAGCGACCAGAAGGCCTGGCGCAA GCGGCAGTTGATCTACAAGCTCTCCAAGCGCGGCACTGTGACCCAGGCGG TCACCGACATAATACTCTGCTCCAAGTTGAAGGCAGCGCCCGATGGCTTT AAGCTGGCCGGCGATATCAACGGAGTGCTTATCTGCTACAAAACCAGCGC GATCCCAGTGCGCCTTTCGCCGCCAGTGCCAGGTGGAGGATTGCCAGCTC CAGCCACTTGCGAGGTGGAGCAGGCCCTGAACCGCCTGAATCTCCAGGGT CAACGCAACTCACGTGGACCACTGCCACAACCGCCGACTGAACACCATGA CTATGAGGAGATCCAAGCCAACTATCAAATAAACTCGCCACAGCGACCGG CGCCACCGCGGCCAGCGGGAGTGGGTTCTGGCGGAGGACACGGTACTTAC GGCGGAACGGGCACCTTGGGCACCTACACCGAGCTGGAGGGAGTGCCTTT CGTCATGGACGTTAGGCTGCAGCGCAACCAAGCTGTGAATGATATACCTA CACTGCCAGAAATCTCTACGCTGCTCAAGTCCCTGGACTATGACTTTCAG CTGGAACGTCAGATCTTGTGCACCATGAAGTCATCGGCATCTAAGAACCC GTTCTTTAAGTAATATTCGCAAACTTTCAACAGAAGCGTCGCAAATTGAT GGTTGGGCAAATGTAAACAGCATGGCAAAAGAACCGGAAATGAGTGGATT TTATATTTAGTTTAACGTAATCGCAAATAGATGCGCGTGTGGCAGCTGCC ATGGTTAACCCAGTAGTTATTCAGTTGGTATTAAGTTCTGAGGACCCCGG CCCCTTAGAGTAAAATGTGTGTAATATTCCTGTGCCTTCGATATGTATCT AATTTGGATGCTCGCCCGAGCAATCAAACACCTCAGTTTCGTAGAACCCC TCATTGGAAAGCAACCGAATCAGAATCCTACCTATTTACATCATAGATAT CATTCATATACATACATGCATCGATTAACCCCAAATCAAATTGTGATCAA AGGAGCGAGCGCAATGTTTTGTCATTAATTTAAAGGCGCTACATCAGATG GCTCATTCGCATATGTATTTCGAAAGGCCGACGCATAAGATACATGTACA TACATGTGTATACACCTATGTTAATGTTGAATAAAGTCCAGAATGCGGAC TAAAGCTAATATAAACCTAGTACATACAAGCATATATCTAATATATATAT ATATATACACGTTTATAGGCCACATAGCACTTAAAACCAGTTGGTTTTTA AAAACATATATCTATTACATATTAGCTCTAGTGACGATTAGACTGTATTG CAAAATCATAGATTCTTCCCAGCTGCCTCCGTCCCCGTCATCCGCATTCC CAGCTCCTTTTCGCCCCTCTTCCTCCAAAAAATACCCCACCATGTTATAT AGCAGTTCAAATACAAGAAAAAAATATATATACGCCACTGAAAATACAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7192.b | 2313 | CG7192.b | 73..2221 | 1..2149 | 10745 | 100 | Plus |
CG7192.d | 2048 | CG7192.d | 42..2048 | 130..2136 | 10035 | 100 | Plus |
CG7192-RA | 1983 | CG7192-RA | 73..1983 | 1..1911 | 9555 | 100 | Plus |
CG7192.d | 2048 | CG7192.d | 1..41 | 25..65 | 205 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17986873..17987826 | 2147..1194 | 4770 | 100 | Minus |
chrX | 22417052 | chrX | 17988183..17988537 | 971..617 | 1775 | 100 | Minus |
chrX | 22417052 | chrX | 17990405..17990648 | 244..1 | 1205 | 99.6 | Minus |
chrX | 22417052 | chrX | 17987894..17988115 | 1193..972 | 1110 | 100 | Minus |
chrX | 22417052 | chrX | 17988821..17989037 | 460..244 | 1085 | 100 | Minus |
chrX | 22417052 | chrX | 17988602..17988758 | 616..460 | 785 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 18097556..18098511 | 2149..1194 | 4780 | 100 | Minus |
X | 23542271 | X | 18098868..18099222 | 971..617 | 1775 | 100 | Minus |
X | 23542271 | X | 18101092..18101335 | 244..1 | 1220 | 100 | Minus |
X | 23542271 | X | 18098579..18098800 | 1193..972 | 1110 | 100 | Minus |
X | 23542271 | X | 18099506..18099722 | 460..244 | 1085 | 100 | Minus |
X | 23542271 | X | 18099287..18099443 | 616..460 | 785 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 18105654..18106609 | 2149..1194 | 4780 | 100 | Minus |
X | 23527363 | X | 18106966..18107320 | 971..617 | 1775 | 100 | Minus |
X | 23527363 | X | 18109190..18109433 | 244..1 | 1220 | 100 | Minus |
X | 23527363 | X | 18106677..18106898 | 1193..972 | 1110 | 100 | Minus |
X | 23527363 | X | 18107604..18107820 | 460..244 | 1085 | 100 | Minus |
X | 23527363 | X | 18107385..18107541 | 616..460 | 785 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 17987894..17988115 | 972..1193 | 100 | <- | Minus |
chrX | 17986873..17987826 | 1194..2147 | 95 | <- | Minus |
chrX | 17988183..17988537 | 617..971 | 100 | <- | Minus |
chrX | 17988602..17988757 | 461..616 | 100 | <- | Minus |
chrX | 17988821..17989037 | 244..460 | 100 | <- | Minus |
chrX | 17990406..17990648 | 1..243 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7192-RB | 1..1059 | 255..1313 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7192-RB | 1..1059 | 255..1313 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7192-RA | 1..1059 | 255..1313 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7192-RB | 1..1059 | 255..1313 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7192-RA | 1..1059 | 255..1313 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7192-RA | 1..1870 | 2..1871 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7192-RA | 1..1870 | 2..1871 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7192-RA | 1..2126 | 22..2147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7192-RA | 1..1870 | 2..1871 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7192-RA | 1..2126 | 22..2147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18097558..18098511 | 1194..2147 | 100 | <- | Minus |
X | 18098579..18098800 | 972..1193 | 100 | <- | Minus |
X | 18098868..18099222 | 617..971 | 100 | <- | Minus |
X | 18099287..18099442 | 461..616 | 100 | <- | Minus |
X | 18099506..18099722 | 244..460 | 100 | <- | Minus |
X | 18101093..18101335 | 1..243 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18097558..18098511 | 1194..2147 | 100 | <- | Minus |
X | 18098579..18098800 | 972..1193 | 100 | <- | Minus |
X | 18098868..18099222 | 617..971 | 100 | <- | Minus |
X | 18099287..18099442 | 461..616 | 100 | <- | Minus |
X | 18099506..18099722 | 244..460 | 100 | <- | Minus |
X | 18101093..18101335 | 1..243 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18097558..18098511 | 1194..2147 | 100 | <- | Minus |
X | 18098579..18098800 | 972..1193 | 100 | <- | Minus |
X | 18098868..18099222 | 617..971 | 100 | <- | Minus |
X | 18099287..18099442 | 461..616 | 100 | <- | Minus |
X | 18099506..18099722 | 244..460 | 100 | <- | Minus |
X | 18101093..18101335 | 1..243 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 17991591..17992544 | 1194..2147 | 100 | <- | Minus |
arm_X | 17992612..17992833 | 972..1193 | 100 | <- | Minus |
arm_X | 17992901..17993255 | 617..971 | 100 | <- | Minus |
arm_X | 17993320..17993475 | 461..616 | 100 | <- | Minus |
arm_X | 17993539..17993755 | 244..460 | 100 | <- | Minus |
arm_X | 17995126..17995368 | 1..243 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18109191..18109433 | 1..243 | 100 | Minus | |
X | 18105656..18106609 | 1194..2147 | 100 | <- | Minus |
X | 18106677..18106898 | 972..1193 | 100 | <- | Minus |
X | 18106966..18107320 | 617..971 | 100 | <- | Minus |
X | 18107385..18107540 | 461..616 | 100 | <- | Minus |
X | 18107604..18107820 | 244..460 | 100 | <- | Minus |
Translation from 254 to 1312
> LD09680.pep MNKVGKHIQSGIGGAPNAALSTAALLGTPLEATNGAGSTSTTNVFNSIMS FLPDNRPITSLHIVEDFERCPKNFSAISRTYDQDSDADLWRDYSLFGRQN TRYLCLSKSEGLPEYVVETLQVISDKTPPPKEFSQVSRTADSDQKAWRKR QLIYKLSKRGTVTQAVTDIILCSKLKAAPDGFKLAGDINGVLICYKTSAI PVRLSPPVPGGGLPAPATCEVEQALNRLNLQGQRNSRGPLPQPPTEHHDY EEIQANYQINSPQRPAPPRPAGVGSGGGHGTYGGTGTLGTYTELEGVPFV MDVRLQRNQAVNDIPTLPEISTLLKSLDYDFQLERQILCTMKSSASKNPF FK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19522-PA | 356 | GF19522-PA | 1..356 | 1..352 | 1388 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18143-PA | 352 | GG18143-PA | 1..352 | 1..352 | 1825 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17939-PA | 377 | GH17939-PA | 1..377 | 1..352 | 1182 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mvb12-PD | 352 | CG7192-PD | 1..352 | 1..352 | 1844 | 100 | Plus |
Mvb12-PB | 352 | CG7192-PB | 1..352 | 1..352 | 1844 | 100 | Plus |
Mvb12-PA | 352 | CG7192-PA | 1..352 | 1..352 | 1844 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15409-PA | 364 | GI15409-PA | 1..364 | 1..352 | 1308 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14911-PA | 192 | GL14911-PA | 70..192 | 230..352 | 362 | 77 | Plus |
Dper\GL14911-PA | 192 | GL14911-PA | 1..89 | 1..83 | 219 | 58.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20171-PA | 365 | GA20171-PA | 1..365 | 1..352 | 1369 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22836-PA | 350 | GM22836-PA | 1..350 | 1..352 | 1826 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24483-PA | 442 | GD24483-PA | 1..310 | 1..312 | 1617 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16368-PA | 359 | GJ16368-PA | 1..359 | 1..352 | 1303 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17889-PA | 372 | GK17889-PA | 1..372 | 1..352 | 1333 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15553-PA | 352 | GE15553-PA | 1..352 | 1..352 | 1841 | 97.7 | Plus |
Translation from 254 to 1312
> LD09680.hyp MNKVGKHIQSGIGGAPNAALSTAALLGTPLEATNGAGSTSTTNVFNSIMS FLPDNRPITSLHIVEDFERCPKNFSAISRTYDQDSDADLWRDYSLFGRQN TRYLCLSKSEGLPEYVVETLQVISDKTPPPKEFSQVSRTADSDQKAWRKR QLIYKLSKRGTVTQAVTDIILCSKLKAAPDGFKLAGDINGVLICYKTSAI PVRLSPPVPGGGLPAPATCEVEQALNRLNLQGQRNSRGPLPQPPTEHHDY EEIQANYQINSPQRPAPPRPAGVGSGGGHGTYGGTGTLGTYTELEGVPFV MDVRLQRNQAVNDIPTLPEISTLLKSLDYDFQLERQILCTMKSSASKNPF FK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7192-PD | 352 | CG7192-PD | 1..352 | 1..352 | 1844 | 100 | Plus |
CG7192-PB | 352 | CG7192-PB | 1..352 | 1..352 | 1844 | 100 | Plus |
CG7192-PA | 352 | CG7192-PA | 1..352 | 1..352 | 1844 | 100 | Plus |