BDGP Sequence Production Resources |
Search the DGRC for LD09689
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 96 |
Well: | 89 |
Vector: | pBS SK- |
Associated Gene/Transcript | Adf1-RA |
Protein status: | LD09689.pep: gold |
Preliminary Size: | 1929 |
Sequenced Size: | 1788 |
Gene | Date | Evidence |
---|---|---|
CG15845 | 2001-01-01 | Release 2 assignment |
CG15845 | 2001-11-09 | Blastp of sequenced clone |
CG15845 | 2003-01-01 | Sim4 clustering to Release 3 |
Adf1 | 2008-04-29 | Release 5.5 accounting |
Adf1 | 2008-08-15 | Release 5.9 accounting |
Adf1 | 2008-12-18 | 5.12 accounting |
1788 bp (1788 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069387
> LD09689.complete GACGTACCGTTACCGTTGGCAGAGACGCGACTGAGAAATAAAATTAAAAC GTCGACGTTCCTTCCTCGTAGAAGAAACCAATCAAAATAAAAACAAACAG AGCGTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGTAAGAAGC AAAGTGAGTGTCGTCGGCTGCGGGAGCCCGTGTGCCCAGTTTGGAACTGG GATCCGACCCAGTCCACGTCCGTCTCGTCCCCGCTAAATTTGTAACTCTT GTTTCCCCGTCTTGTCCCCTCAGTGCATACCCTCACGGCGGCCATTGAGA TGGACAAGCTGGATGCCAATCTTGAGCAGCAGTTTGATCTCAATCTCATC GAGGCTGTCAAGCTGAACCCAGTGATATACGACAGGTCGCACTACAATTA CAAGCACTTTGTGCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGC TCGGTGTGCCTGAACAAAAATGTACGAAGCGCTGGAAGAGTCTGCGCGAC AAGTTCGCCCGCGAGATGAAACTATGTCAGGAATCGCGCTGGCGTTACTT CAAGCAGATGCAATTCCTGGTTGACTCCATCCGCCAGTATCGAGAGTCGC TGCTCGGCAAGTGCGCCAATGGGAGTCAAAGCGCCAACCAGGTGGCCGAT CCGTCGCAGCAGCAGCAGGCGCAGCAACAGACCGTCGTGGATATATTTGC ACAGCCCTTCAACGGCAGCGCCACAACCTCGGCCCAGGCACTGACCCATC CGCATGAAATTACTGTCACCAGCGATGCACAGCTGGCCACTGCCGTGGGC AAGGACCAAAAGCCATACTTCTACGAGCCGCCGCTCAAGCGAGAGCGCAG TGAGGAGGAGCACAGCGACAACATGCTCAACACCATCAAGATTTTCCAAA ACAACGTCTCGCAGGCGGTCAGCGCCGAGGACCAGTCGTTCGGCATGGTA GTCACGGACATGCTCAACACGCTGGGCGTGCGACAAAAGGCAGAGGCGAA GGTGCACATCATCAAGTATCTGACGGACATGCAGCTTCTGGCACAGCACA ACAAGTACTAACTGTCGGGCGGCTGTCATCGGCAGCTGCTGCAGCTGCTC CAACTGGAGAGCGTTCTGCCCTGAGATCAAACGAGAACAGACCCACGGCT ACCCACATCCACATCTACACGGGTTTGGGGGTCCTGTGCGGTCATTTTCT ACAGTTCATAGGTCTTAAAGTCAAACTACAGAATAACATTAGACGTAACA TCCCACAGCGTAAACCATAACGCGTAATGATACTTCCCCACGCCCATGTA GACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTA ATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCG ATTCTAGAATTATGAGTAGCTTGTTAAAAGACCGTGGAAACACTTTATAT GCAGCGTATTGTAAATTTTGACTACGATTTAGTTGTAATTTGCCATCGGG TCTTAGCTCTAAAACTAAGTATACACGTAAAAGTTATTTTAATTTTATAA GTTCTGTTGTAATATGCCGAAAACGCTTGAAAGACACTTTGAAATGCTTA ATTAAGTGTGACAAAGGGAAACATAAAACACCTTTTTCATAGTGATCGCA TATTACACACTTTACATGGATACGAGTAAAATCGAAATAGTTGCCGGCAA CGCCAGTTGCTAAACATTTTTAATGATTAATTGTGCAATTATTTGGTATT AAATGAAACATTTGAAAGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Adf1-RB | 1961 | Adf1-RB | 86..1856 | 1..1771 | 8855 | 100 | Plus |
Adf1-RC | 1841 | Adf1-RC | 239..1736 | 274..1771 | 7490 | 100 | Plus |
Adf1-RA | 1829 | Adf1-RA | 227..1724 | 274..1771 | 7490 | 100 | Plus |
Adf1-RC | 1841 | Adf1-RC | 86..238 | 1..153 | 765 | 100 | Plus |
Adf1-RA | 1829 | Adf1-RA | 86..226 | 1..141 | 705 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 2554264..2555277 | 756..1769 | 5070 | 100 | Plus |
chr2R | 21145070 | chr2R | 2549489..2549950 | 1..462 | 2310 | 100 | Plus |
chr2R | 21145070 | chr2R | 2553911..2554205 | 462..756 | 1475 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
412 | 7567 | 412 412 7567bp | 6929..6987 | 43..101 | 115 | 66.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 2549489..2549950 | 1..462 | 100 | -> | Plus |
chr2R | 2553912..2554205 | 463..756 | 100 | -> | Plus |
chr2R | 2554265..2555277 | 757..1769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adf1-RC | 2..789 | 274..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adf1-RC | 2..789 | 274..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adf1-RE | 1..825 | 300..1124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adf1-RC | 2..789 | 274..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adf1-RE | 1..825 | 300..1124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adf1-RB | 28..1796 | 1..1769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adf1-RB | 28..1796 | 1..1769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adf1-RB | 27..1795 | 1..1769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adf1-RB | 28..1796 | 1..1769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adf1-RB | 27..1795 | 1..1769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6662296..6662757 | 1..462 | 100 | -> | Plus |
2R | 6666720..6667013 | 463..756 | 100 | -> | Plus |
2R | 6667073..6668085 | 757..1769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6662296..6662757 | 1..462 | 100 | -> | Plus |
2R | 6666720..6667013 | 463..756 | 100 | -> | Plus |
2R | 6667073..6668085 | 757..1769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6662296..6662757 | 1..462 | 100 | -> | Plus |
2R | 6666720..6667013 | 463..756 | 100 | -> | Plus |
2R | 6667073..6668085 | 757..1769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 2549801..2550262 | 1..462 | 100 | -> | Plus |
arm_2R | 2554225..2554518 | 463..756 | 100 | -> | Plus |
arm_2R | 2554578..2555590 | 757..1769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6663495..6663956 | 1..462 | 100 | -> | Plus |
2R | 6667919..6668212 | 463..756 | 100 | -> | Plus |
2R | 6668272..6669284 | 757..1769 | 100 | Plus |
Translation from 299 to 1060
> LD09689.pep MDKLDANLEQQFDLNLIEAVKLNPVIYDRSHYNYKHFVRKAQTWKQIAET LGVPEQKCTKRWKSLRDKFAREMKLCQESRWRYFKQMQFLVDSIRQYRES LLGKCANGSQSANQVADPSQQQQAQQQTVVDIFAQPFNGSATTSAQALTH PHEITVTSDAQLATAVGKDQKPYFYEPPLKRERSEEEHSDNMLNTIKIFQ NNVSQAVSAEDQSFGMVVTDMLNTLGVRQKAEAKVHIIKYLTDMQLLAQH NKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11060-PA | 535 | GF11060-PA | 283..535 | 1..253 | 1376 | 98.8 | Plus |
Dana\GF15373-PA | 460 | GF15373-PA | 141..255 | 16..121 | 182 | 35.6 | Plus |
Dana\GF10717-PA | 679 | GF10717-PA | 302..398 | 7..96 | 153 | 33 | Plus |
Dana\GF15373-PA | 460 | GF15373-PA | 3..102 | 13..103 | 148 | 34 | Plus |
Dana\GF17699-PA | 337 | GF17699-PA | 28..121 | 11..98 | 146 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23211-PA | 253 | GG23211-PA | 1..253 | 1..253 | 1366 | 99.6 | Plus |
Dere\GG21572-PA | 459 | GG21572-PA | 141..391 | 16..236 | 180 | 25.6 | Plus |
Dere\GG13380-PA | 678 | GG13380-PA | 39..139 | 13..108 | 153 | 33.3 | Plus |
Dere\GG21572-PA | 459 | GG21572-PA | 3..92 | 13..96 | 152 | 34.4 | Plus |
Dere\GG13380-PA | 678 | GG13380-PA | 306..402 | 7..96 | 150 | 32 | Plus |
Dere\GG11417-PA | 336 | GG11417-PA | 28..121 | 11..98 | 147 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21743-PA | 253 | GH21743-PA | 1..253 | 1..253 | 1338 | 96.8 | Plus |
Dgri\GH14617-PA | 770 | GH14617-PA | 402..498 | 7..96 | 166 | 35.1 | Plus |
Dgri\GH11654-PA | 502 | GH11654-PA | 142..236 | 16..107 | 164 | 40.8 | Plus |
Dgri\GH11654-PA | 502 | GH11654-PA | 3..95 | 13..102 | 151 | 34.4 | Plus |
Dgri\GH20726-PA | 334 | GH20726-PA | 12..95 | 13..90 | 150 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Adf1-PE | 274 | CG15845-PE | 1..253 | 1..253 | 1311 | 100 | Plus |
Adf1-PC | 262 | CG15845-PC | 10..262 | 1..253 | 1311 | 100 | Plus |
Adf1-PB | 253 | CG15845-PB | 1..253 | 1..253 | 1311 | 100 | Plus |
Adf1-PA | 253 | CG15845-PA | 1..253 | 1..253 | 1311 | 100 | Plus |
CG10949-PB | 459 | CG10949-PB | 131..391 | 2..236 | 170 | 25.6 | Plus |
CG10949-PA | 459 | CG10949-PA | 131..391 | 2..236 | 170 | 25.6 | Plus |
CG8765-PB | 600 | CG8765-PB | 220..316 | 7..96 | 156 | 32 | Plus |
CG8765-PC | 688 | CG8765-PC | 308..404 | 7..96 | 156 | 32 | Plus |
CG8765-PA | 690 | CG8765-PA | 310..406 | 7..96 | 156 | 32 | Plus |
CG10949-PB | 459 | CG10949-PB | 3..92 | 13..96 | 150 | 34.4 | Plus |
CG10949-PA | 459 | CG10949-PA | 3..92 | 13..96 | 150 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19291-PA | 253 | GI19291-PA | 1..253 | 1..253 | 1341 | 97.2 | Plus |
Dmoj\GI17956-PA | 461 | GI17956-PA | 142..253 | 16..128 | 172 | 37.8 | Plus |
Dmoj\GI13504-PA | 728 | GI13504-PA | 349..454 | 7..107 | 164 | 34.3 | Plus |
Dmoj\GI20810-PA | 335 | GI20810-PA | 12..95 | 13..90 | 148 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11108-PA | 250 | GL11108-PA | 1..250 | 1..253 | 1246 | 93.7 | Plus |
Dper\GL26413-PA | 448 | GL26413-PA | 140..254 | 16..121 | 155 | 33 | Plus |
Dper\GL20873-PA | 737 | GL20873-PA | 306..402 | 7..96 | 150 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13983-PA | 250 | GA13983-PA | 1..250 | 1..253 | 1246 | 93.7 | Plus |
Dpse\GA10661-PA | 448 | GA10661-PA | 140..254 | 16..121 | 156 | 33 | Plus |
Dpse\GA21303-PA | 697 | GA21303-PA | 320..416 | 7..96 | 151 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20885-PA | 253 | GM20885-PA | 1..253 | 1..253 | 1366 | 99.6 | Plus |
Dsec\GM23328-PA | 459 | GM23328-PA | 141..391 | 16..236 | 187 | 26.8 | Plus |
Dsec\GM10256-PA | 336 | GM10256-PA | 28..121 | 11..98 | 153 | 36.2 | Plus |
Dsec\GM16842-PA | 683 | GM16842-PA | 35..135 | 13..108 | 152 | 32.4 | Plus |
Dsec\GM16842-PA | 683 | GM16842-PA | 302..398 | 7..96 | 151 | 32 | Plus |
Dsec\GM23328-PA | 459 | GM23328-PA | 3..102 | 13..103 | 149 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10415-PA | 253 | GD10415-PA | 1..253 | 1..253 | 1366 | 99.6 | Plus |
Dsim\GD21703-PA | 459 | GD21703-PA | 141..391 | 16..236 | 183 | 26.8 | Plus |
Dsim\GD21228-PA | 336 | GD21228-PA | 28..121 | 11..98 | 153 | 36.2 | Plus |
Dsim\GD12257-PA | 682 | GD12257-PA | 35..135 | 13..108 | 151 | 32.4 | Plus |
Dsim\GD12257-PA | 682 | GD12257-PA | 302..398 | 7..96 | 151 | 32 | Plus |
Dsim\GD21703-PA | 459 | GD21703-PA | 3..102 | 13..103 | 150 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22167-PA | 253 | GJ22167-PA | 1..253 | 1..253 | 1348 | 98 | Plus |
Dvir\GJ11865-PA | 706 | GJ11865-PA | 338..498 | 7..158 | 164 | 27 | Plus |
Dvir\GJ20543-PA | 330 | GJ20543-PA | 12..95 | 13..90 | 151 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23084-PA | 253 | GK23084-PA | 1..253 | 1..253 | 1321 | 97.2 | Plus |
Dwil\GK18122-PA | 430 | GK18122-PA | 149..229 | 16..90 | 165 | 43.2 | Plus |
Dwil\GK25760-PA | 693 | GK25760-PA | 305..403 | 7..96 | 149 | 32.3 | Plus |
Dwil\GK18122-PA | 430 | GK18122-PA | 3..88 | 13..92 | 147 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19065-PA | 253 | GE19065-PA | 1..253 | 1..253 | 1366 | 99.6 | Plus |
Dyak\GE12593-PA | 459 | GE12593-PA | 141..321 | 16..178 | 179 | 30.2 | Plus |
Dyak\GE22473-PA | 679 | GE22473-PA | 311..407 | 7..96 | 150 | 32 | Plus |
Dyak\GE22475-PA | 745 | GE22475-PA | 378..474 | 7..96 | 148 | 32 | Plus |
Dyak\GE22473-PA | 679 | GE22473-PA | 39..139 | 13..108 | 147 | 32.4 | Plus |
Translation from 299 to 1060
> LD09689.hyp MDKLDANLEQQFDLNLIEAVKLNPVIYDRSHYNYKHFVRKAQTWKQIAET LGVPEQKCTKRWKSLRDKFAREMKLCQESRWRYFKQMQFLVDSIRQYRES LLGKCANGSQSANQVADPSQQQQAQQQTVVDIFAQPFNGSATTSAQALTH PHEITVTSDAQLATAVGKDQKPYFYEPPLKRERSEEEHSDNMLNTIKIFQ NNVSQAVSAEDQSFGMVVTDMLNTLGVRQKAEAKVHIIKYLTDMQLLAQH NKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Adf1-PB | 253 | CG15845-PB | 1..253 | 1..253 | 1311 | 100 | Plus |
Adf1-PA | 253 | CG15845-PA | 1..253 | 1..253 | 1311 | 100 | Plus |
Adf1-PC | 262 | CG15845-PC | 10..262 | 1..253 | 1311 | 100 | Plus |
Adf1-PE | 274 | CG15845-PE | 1..253 | 1..253 | 1311 | 100 | Plus |
CG10949-PB | 459 | CG10949-PB | 131..391 | 2..236 | 170 | 25.6 | Plus |