BDGP Sequence Production Resources |
Search the DGRC for LD09732
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 97 |
Well: | 32 |
Vector: | pBS SK- |
Associated Gene/Transcript | cm-RA |
Protein status: | LD09732.pep: gold |
Preliminary Size: | 1645 |
Sequenced Size: | 1477 |
Gene | Date | Evidence |
---|---|---|
CG3035 | 2001-11-02 | Blastp of sequenced clone |
cm | 2008-04-29 | Release 5.5 accounting |
cm | 2008-08-15 | Release 5.9 accounting |
inx7 | 2008-08-15 | Release 5.9 accounting |
cm | 2008-12-18 | 5.12 accounting |
inx7 | 2008-12-18 | 5.12 accounting |
1477 bp (1477 high quality bases) assembled on 2001-11-02
GenBank Submission: AY069388
> LD09732.complete CTTAAACTAGCAAGCAATTTAGGTCGAATTATGATACACAGTCTGTTTAT TGTAAACAGCGGCGGCGAGGTCTTCCTGGAAAAGCATTGGCGCTCGGTTG TCTCGAGATCTGTGTGCGAATACTTCCTTGACGCCCAGCGCGCTGCTCCA TATGATGTGCCGCCGGTGATAGCCACGCCCCACTACTACCTGATTACAGT GCAAAGGGACACGGTGTCTTTGGTCGCCGCCTGCAAGCAGGAGGTGCCGC CGCTCTTTGTCATCGAGTTCCTGCATCGCGTGGTGGACACCTTCCAGGAC TATTTCGGCGACTGCTCCGAGTCCGTGATCAAGGACAACTATGTGGTCGT TTACGAGCTGCTGGACGAGATGCTCGATAATGGCTTCCCACTGGCCACCG AGAGCAACATCCTCAAGGAGCTGATCAAGCCGCCCAATATCCTGCGCACC ATTGCCAACACGGTGACGGGCAAGAGCAATGTAAGCACTACTTTGCCCTC GGGTCAGCTGTCGGCGGTTCGCTGGCGCAGAAGCGGCGTGAGGTACACCA ACAACGAGGCGTACTTCGATGTCATCGAGGAGGTGGACGCTATCATTGAT AAATCCGGATCCACGGTCTTTGCCGAGATCCAGGGACACATCGACTGCTG CATTAAGTTATCCGGCATGCCAGATCTGACGTTATCTTTCATGAATCCTC GCCTCTTCGACGACGTTTCCTTCCATCCTTGCGTGCGCTACAAGCGCTGG GAGGCGGAGCGCCTGCTCTCCTTTATCCCGCCCGACGGAAACTTCCGCCT GATGTCATATCACATTAGCTCTCAGTCCGTGGTGGCCATACCCATCTACA TCAGGCACAACTTTTCGATCAAAACGGGTGAGCAGGGGCGTCTGGACCTC ACGATTGGCCCGAGGAACACCCTTGGTCGCACCGTTGACAAGGTGAAGCT GGAGCTGACCATGCCGCGGTGTGTGCTTAATTGCCTATTGACGCCGAATC AGGGAAAGTATACCTTCGATTCGGTGACCAAGACGCTGTCCTGGGATGTG GGACGGATCGATGTTTCCAAGTTGCCAAATATTAGGGGATCGGTTTCCAT TACGCCCGGTACGACCAACATCGATGCCAATCCATCCGTGAATGTCCAGT TCCAAATCTCGCAGCTGGCCGTCTCTGGGCTAAAGGTAAATCGCCTGGAC ATGTACGGCGAGAAGTACAAGCCTTTCAAGGGCGTCAAATACCTGACCAA GGCGGGCAAGTTCCAGGTGCGGATGTAGACAAAATCATCATCCGGATTCC AATTCCAGCTTTAATTAATAGCTAACGTTAAGTGTATTCCGCTTGTTTTT TTTTTTTCATTTGATGTTCTAGCCCTCGTCTCTCTCCCTGTGTATCTCAT TTATGTATCTATATCTCTACCCATAAAATATTAACTTCAAGTGTAAAAAA AAAAAATGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6901851..6902305 | 1094..640 | 2170 | 98.5 | Minus |
chrX | 22417052 | chrX | 6901389..6901743 | 1445..1092 | 1725 | 99.7 | Minus |
chrX | 22417052 | chrX | 6902597..6902922 | 479..154 | 1585 | 99.1 | Minus |
chrX | 22417052 | chrX | 6902361..6902520 | 639..480 | 770 | 98.8 | Minus |
chrX | 22417052 | chrX | 6902977..6903066 | 154..65 | 450 | 100 | Minus |
chrX | 22417052 | chrX | 6903127..6903191 | 65..1 | 325 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 7009772..7010226 | 1094..640 | 2275 | 100 | Minus |
X | 23542271 | X | 7009310..7009664 | 1445..1092 | 1725 | 99.7 | Minus |
X | 23542271 | X | 7010519..7010844 | 479..154 | 1630 | 100 | Minus |
X | 23542271 | X | 7010283..7010442 | 639..480 | 800 | 100 | Minus |
X | 23542271 | X | 7010899..7010988 | 154..65 | 450 | 100 | Minus |
X | 23542271 | X | 7011057..7011121 | 65..1 | 325 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 7017870..7018324 | 1094..640 | 2275 | 100 | Minus |
X | 23527363 | X | 7017408..7017762 | 1445..1092 | 1735 | 99.7 | Minus |
X | 23527363 | X | 7018617..7018942 | 479..154 | 1630 | 100 | Minus |
X | 23527363 | X | 7018381..7018540 | 639..480 | 800 | 100 | Minus |
X | 23527363 | X | 7018997..7019086 | 154..65 | 450 | 100 | Minus |
X | 23527363 | X | 7019155..7019219 | 65..1 | 325 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6902978..6903065 | 66..153 | 100 | <- | Minus |
chrX | 6903127..6903191 | 1..65 | 100 | Minus | |
chrX | 6901389..6901742 | 1093..1445 | 99 | <- | Minus |
chrX | 6901853..6902305 | 640..1092 | 98 | <- | Minus |
chrX | 6902361..6902520 | 480..639 | 98 | <- | Minus |
chrX | 6902597..6902922 | 154..479 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cm-RA | 1..1248 | 31..1278 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cm-RA | 1..1248 | 31..1278 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cm-RA | 1..1248 | 31..1278 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cm-RA | 1..1248 | 31..1278 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cm-RA | 1..1248 | 31..1278 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cm-RA | 15..1460 | 1..1445 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cm-RA | 15..1459 | 1..1444 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cm-RB | 25..1470 | 1..1445 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cm-RA | 15..1460 | 1..1445 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cm-RB | 25..1470 | 1..1445 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7010283..7010442 | 480..639 | 100 | <- | Minus |
X | 7009310..7009663 | 1093..1445 | 99 | <- | Minus |
X | 7009774..7010226 | 640..1092 | 100 | <- | Minus |
X | 7010519..7010844 | 154..479 | 100 | <- | Minus |
X | 7010900..7010987 | 66..153 | 100 | <- | Minus |
X | 7011057..7011121 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7010283..7010442 | 480..639 | 100 | <- | Minus |
X | 7009310..7009663 | 1093..1445 | 99 | <- | Minus |
X | 7009774..7010226 | 640..1092 | 100 | <- | Minus |
X | 7010519..7010844 | 154..479 | 100 | <- | Minus |
X | 7010900..7010987 | 66..153 | 100 | <- | Minus |
X | 7011057..7011121 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7010283..7010442 | 480..639 | 100 | <- | Minus |
X | 7009310..7009663 | 1093..1445 | 99 | <- | Minus |
X | 7009774..7010226 | 640..1092 | 100 | <- | Minus |
X | 7010519..7010844 | 154..479 | 100 | <- | Minus |
X | 7010900..7010987 | 66..153 | 100 | <- | Minus |
X | 7011057..7011121 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6904552..6904877 | 154..479 | 100 | <- | Minus |
arm_X | 6904933..6905020 | 66..153 | 100 | <- | Minus |
arm_X | 6905090..6905154 | 1..65 | 100 | Minus | |
arm_X | 6903343..6903696 | 1093..1445 | 99 | <- | Minus |
arm_X | 6903807..6904259 | 640..1092 | 100 | <- | Minus |
arm_X | 6904316..6904475 | 480..639 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7017408..7017761 | 1093..1445 | 99 | <- | Minus |
X | 7017872..7018324 | 640..1092 | 100 | <- | Minus |
X | 7018381..7018540 | 480..639 | 100 | <- | Minus |
X | 7018617..7018942 | 154..479 | 100 | <- | Minus |
X | 7018998..7019085 | 66..153 | 100 | <- | Minus |
X | 7019155..7019219 | 1..65 | 100 | Minus |
Translation from 0 to 1277
> LD09732.hyp LKLASNLGRIMIHSLFIVNSGGEVFLEKHWRSVVSRSVCEYFLDAQRAAP YDVPPVIATPHYYLITVQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQD YFGDCSESVIKDNYVVVYELLDEMLDNGFPLATESNILKELIKPPNILRT IANTVTGKSNVSTTLPSGQLSAVRWRRSGVRYTNNEAYFDVIEEVDAIID KSGSTVFAEIQGHIDCCIKLSGMPDLTLSFMNPRLFDDVSFHPCVRYKRW EAERLLSFIPPDGNFRLMSYHISSQSVVAIPIYIRHNFSIKTGEQGRLDL TIGPRNTLGRTVDKVKLELTMPRCVLNCLLTPNQGKYTFDSVTKTLSWDV GRIDVSKLPNIRGSVSITPGTTNIDANPSVNVQFQISQLAVSGLKVNRLD MYGEKYKPFKGVKYLTKAGKFQVRM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cm-PB | 415 | CG3035-PB | 1..415 | 11..425 | 2163 | 100 | Plus |
cm-PA | 415 | CG3035-PA | 1..415 | 11..425 | 2163 | 100 | Plus |
AP-1mu-PA | 426 | CG9388-PA | 5..424 | 14..424 | 450 | 27.4 | Plus |
AP-2mu-PC | 437 | CG7057-PC | 1..436 | 11..424 | 416 | 27.3 | Plus |
AP-2mu-PB | 437 | CG7057-PB | 1..436 | 11..424 | 416 | 27.3 | Plus |
Translation from 30 to 1277
> LD09732.pep MIHSLFIVNSGGEVFLEKHWRSVVSRSVCEYFLDAQRAAPYDVPPVIATP HYYLITVQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVI KDNYVVVYELLDEMLDNGFPLATESNILKELIKPPNILRTIANTVTGKSN VSTTLPSGQLSAVRWRRSGVRYTNNEAYFDVIEEVDAIIDKSGSTVFAEI QGHIDCCIKLSGMPDLTLSFMNPRLFDDVSFHPCVRYKRWEAERLLSFIP PDGNFRLMSYHISSQSVVAIPIYIRHNFSIKTGEQGRLDLTIGPRNTLGR TVDKVKLELTMPRCVLNCLLTPNQGKYTFDSVTKTLSWDVGRIDVSKLPN IRGSVSITPGTTNIDANPSVNVQFQISQLAVSGLKVNRLDMYGEKYKPFK GVKYLTKAGKFQVRM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20328-PA | 415 | GF20328-PA | 1..415 | 1..415 | 2180 | 97.8 | Plus |
Dana\GF16536-PA | 426 | GF16536-PA | 5..424 | 4..414 | 467 | 28.3 | Plus |
Dana\GF23377-PA | 437 | GF23377-PA | 1..436 | 1..414 | 433 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17643-PA | 415 | GG17643-PA | 1..415 | 1..415 | 2205 | 99.3 | Plus |
Dere\GG17361-PA | 426 | GG17361-PA | 5..424 | 4..414 | 467 | 28.3 | Plus |
Dere\AP-50-PA | 437 | GG11137-PA | 1..436 | 1..414 | 433 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24272-PA | 415 | GH24272-PA | 1..415 | 1..415 | 2173 | 97.1 | Plus |
Dgri\AP-47-PA | 426 | GH19303-PA | 5..424 | 4..414 | 464 | 28.1 | Plus |
Dgri\GH22222-PA | 437 | GH22222-PA | 1..436 | 1..414 | 433 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cm-PB | 415 | CG3035-PB | 1..415 | 1..415 | 2163 | 100 | Plus |
cm-PA | 415 | CG3035-PA | 1..415 | 1..415 | 2163 | 100 | Plus |
AP-1mu-PA | 426 | CG9388-PA | 5..424 | 4..414 | 450 | 27.4 | Plus |
AP-2mu-PC | 437 | CG7057-PC | 1..436 | 1..414 | 416 | 27.3 | Plus |
AP-2mu-PB | 437 | CG7057-PB | 1..436 | 1..414 | 416 | 27.3 | Plus |
AP-2mu-PA | 437 | CG7057-PA | 1..436 | 1..414 | 416 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21579-PA | 415 | GI21579-PA | 1..415 | 1..415 | 2164 | 96.6 | Plus |
Dmoj\GI23520-PA | 426 | GI23520-PA | 5..424 | 4..414 | 464 | 28.3 | Plus |
Dmoj\GI21976-PA | 437 | GI21976-PA | 1..436 | 1..414 | 433 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26809-PA | 436 | GL26809-PA | 1..436 | 1..415 | 1898 | 83.7 | Plus |
Dper\GL21499-PA | 426 | GL21499-PA | 5..424 | 4..414 | 466 | 28.5 | Plus |
Dper\GL24218-PA | 437 | GL24218-PA | 1..436 | 1..414 | 433 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15778-PA | 415 | GA15778-PA | 1..415 | 1..415 | 2186 | 98.1 | Plus |
Dpse\GA21750-PA | 426 | GA21750-PA | 5..424 | 4..414 | 466 | 28.5 | Plus |
Dpse\GA20066-PA | 437 | GA20066-PA | 1..436 | 1..414 | 433 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17484-PA | 415 | GM17484-PA | 1..415 | 1..415 | 2217 | 99.8 | Plus |
Dsec\GM26246-PA | 426 | GM26246-PA | 5..424 | 4..414 | 467 | 28.3 | Plus |
Dsec\GM26435-PA | 437 | GM26435-PA | 1..436 | 1..414 | 433 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16169-PA | 416 | GD16169-PA | 1..401 | 1..401 | 2115 | 98.3 | Plus |
Dsim\GD20786-PA | 426 | GD20786-PA | 5..424 | 4..414 | 467 | 28.3 | Plus |
Dsim\AP-50-PA | 437 | GD20952-PA | 1..436 | 1..414 | 433 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15801-PA | 415 | GJ15801-PA | 1..415 | 1..415 | 2137 | 95.4 | Plus |
Dvir\GJ10271-PA | 426 | GJ10271-PA | 5..424 | 4..414 | 464 | 28.3 | Plus |
Dvir\GJ14336-PA | 437 | GJ14336-PA | 1..436 | 1..414 | 435 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25293-PA | 415 | GK25293-PA | 1..415 | 1..415 | 2186 | 98.1 | Plus |
Dwil\GK11256-PA | 426 | GK11256-PA | 5..424 | 4..414 | 465 | 28.3 | Plus |
Dwil\GK11695-PA | 437 | GK11695-PA | 1..436 | 1..414 | 433 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17549-PA | 415 | GE17549-PA | 1..415 | 1..415 | 2218 | 99.8 | Plus |
Dyak\GE24766-PA | 426 | GE24766-PA | 5..424 | 4..414 | 467 | 28.3 | Plus |
Dyak\AP-50-PA | 437 | GE10302-PA | 1..436 | 1..414 | 433 | 28.2 | Plus |