BDGP Sequence Production Resources |
Search the DGRC for LD09733
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 97 |
Well: | 33 |
Vector: | pBS SK- |
Associated Gene/Transcript | hng2-RA |
Protein status: | LD09733.pep: gold |
Preliminary Size: | 1386 |
Sequenced Size: | 1213 |
Gene | Date | Evidence |
---|---|---|
CG8359 | 2001-01-01 | Release 2 assignment |
CG8359 | 2002-06-10 | Blastp of sequenced clone |
CG8359 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8359 | 2008-04-29 | Release 5.5 accounting |
CG8359 | 2008-08-15 | Release 5.9 accounting |
CG8359 | 2008-12-18 | 5.12 accounting |
1213 bp (1213 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121643
> LD09733.complete ATCCAATCCAACCCTTAAATAAACAATAAATAATGGGCAATCATAAAGTT CTTCGATCGGCAGGAAGCAATTTGCGCTATTCGATGTACGAGTTCATTGA CGCGGTACACAAACGTTCTATTATATGGGAACGAAGCCACCCAAACTTCC ATAACCGCGAACTCAGAGATGAGGCCTGGCAGCAAATTGGCCACGAGCTT TGCTCGAATTTTGACGACTCCAGCGAGCCGGAGAAGCAGGAAATAGTTAA AACACTGCTCAAACGTTGGAAAAACACGAGGGACAGCTACCTACGGGTCA ACCGACTACGTCAAAGTGGCGAGGAGGTGGCCAGAGCTTCCTACATCTAC GAAAAGGAACTGAGTTTCCTGCTGAACGTGAAAGCAGAGTCGGAGGACGA TGTAGAATCCTTGAAGGAGCAACCCAAGCCCCAGGCCAAACGGAAGCGAG TGAGCACTGCCGCACAGAGATCTGCAAAGACTCCACGAAAGAGAAACTCC GACCAAGAATCGAATATTGAGCCTGCCATCCGCAATCCAGCCATACCAAG CAACATAAATACGGTTCTGGGAGATCTGGGCTGCGCCAAGGAGGACACCG CCACTCCGGAAATCGCATATATTCCACAGTTACCATCAGATCCACCCTGC AGTACAAATACCGCCTACTTGTCCGCCGATCCTGATCAGGCCTTCTTCGA CACCATTAAGCCTCACATGCAGCAGATGTGCGCCGATCGCAAGCTTGACT TTCAGATCGAGGTCCTGAAAATCCTACGAAACTTCAAGCCGAATTGAATA TTCACTACAGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAA ATTCGTTTAACAGCAAGTTAACATAAGCAATAAGAATACATTTAATCGTT ATCGTAAATCGTCTAATCTTTAGGGCGCGAAATTTAAATAATGAACTGTA ATTTGTAATTTAATATACAAACAATAATATTCACAAACCAGGGGTTAAAC TTTAATGCAACCAATGATTCAATTATTTTTTTTAGTTCTTAATAATGCGT CAAATAGTTTTCTCATAGTAACTTCTGTGTTTTGCGCAATGTATATATTA TACGCTTACTTTTGTAATTTTTGATAATAATACAATAGTTGTAGAGTTAT TTAAGACAATGAAAAAAACATTAAAAACAACATTAAATAATGTATAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8359-RA | 1237 | CG8359-RA | 43..1237 | 1..1195 | 5975 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy4 | 6852 | gypsy4 GYPSY4 6852bp | 5026..5069 | 1147..1190 | 130 | 77.3 | Plus |
S-element | 1736 | S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). | 1425..1490 | 1157..1094 | 118 | 66.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4632283..4632528 | 1..246 | 100 | -> | Plus |
chr3R | 4632582..4633530 | 247..1195 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8359-RA | 1..765 | 33..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8359-RA | 1..765 | 33..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8359-RA | 1..765 | 33..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8359-RA | 1..765 | 33..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
hng2-RA | 1..765 | 33..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8359-RA | 1..1194 | 2..1195 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8359-RA | 11..1205 | 1..1195 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8359-RA | 13..1207 | 1..1195 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8359-RA | 1..1194 | 2..1195 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
hng2-RA | 13..1207 | 1..1195 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8806334..8806579 | 1..246 | 100 | -> | Plus |
3R | 8806633..8807581 | 247..1195 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8806334..8806579 | 1..246 | 100 | -> | Plus |
3R | 8806633..8807581 | 247..1195 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8806334..8806579 | 1..246 | 100 | -> | Plus |
3R | 8806633..8807581 | 247..1195 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4632056..4632301 | 1..246 | 100 | -> | Plus |
arm_3R | 4632355..4633303 | 247..1195 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8547165..8547410 | 1..246 | 100 | -> | Plus |
3R | 8547464..8548412 | 247..1195 | 100 | Plus |
Translation from 32 to 796
> LD09733.pep MGNHKVLRSAGSNLRYSMYEFIDAVHKRSIIWERSHPNFHNRELRDEAWQ QIGHELCSNFDDSSEPEKQEIVKTLLKRWKNTRDSYLRVNRLRQSGEEVA RASYIYEKELSFLLNVKAESEDDVESLKEQPKPQAKRKRVSTAAQRSAKT PRKRNSDQESNIEPAIRNPAIPSNINTVLGDLGCAKEDTATPEIAYIPQL PSDPPCSTNTAYLSADPDQAFFDTIKPHMQQMCADRKLDFQIEVLKILRN FKPN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18193-PA | 248 | GF18193-PA | 1..248 | 1..254 | 868 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13214-PA | 254 | GG13214-PA | 1..254 | 1..254 | 1257 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18253-PA | 282 | GH18253-PA | 1..265 | 1..251 | 666 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hng2-PA | 254 | CG8359-PA | 1..254 | 1..254 | 1329 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23652-PA | 253 | GI23652-PA | 1..253 | 1..254 | 728 | 57.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12487-PA | 260 | GL12487-PA | 1..260 | 1..254 | 820 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21016-PA | 260 | GA21016-PA | 1..260 | 1..254 | 807 | 60.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23767-PA | 254 | GM23767-PA | 1..254 | 1..254 | 1289 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18578-PA | 254 | GD18578-PA | 1..254 | 1..254 | 1309 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23496-PA | 252 | GJ23496-PA | 1..252 | 1..254 | 697 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11258-PA | 250 | GK11258-PA | 1..250 | 1..254 | 696 | 55.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25911-PA | 254 | GE25911-PA | 1..254 | 1..254 | 1286 | 93.7 | Plus |
Translation from 32 to 796
> LD09733.hyp MGNHKVLRSAGSNLRYSMYEFIDAVHKRSIIWERSHPNFHNRELRDEAWQ QIGHELCSNFDDSSEPEKQEIVKTLLKRWKNTRDSYLRVNRLRQSGEEVA RASYIYEKELSFLLNVKAESEDDVESLKEQPKPQAKRKRVSTAAQRSAKT PRKRNSDQESNIEPAIRNPAIPSNINTVLGDLGCAKEDTATPEIAYIPQL PSDPPCSTNTAYLSADPDQAFFDTIKPHMQQMCADRKLDFQIEVLKILRN FKPN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hng2-PA | 254 | CG8359-PA | 1..254 | 1..254 | 1329 | 100 | Plus |