BDGP Sequence Production Resources |
Search the DGRC for LD09786
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 97 |
Well: | 86 |
Vector: | pBS SK- |
Associated Gene/Transcript | Lhr-RA |
Protein status: | LD09786.pep: gold |
Preliminary Size: | 1341 |
Sequenced Size: | 1188 |
Gene | Date | Evidence |
---|---|---|
CG18468 | 2001-01-01 | Release 2 assignment |
CG18468 | 2001-10-10 | Blastp of sequenced clone |
CG18468 | 2003-01-01 | Sim4 clustering to Release 3 |
Lhr | 2008-04-29 | Release 5.5 accounting |
Lhr | 2008-08-15 | Release 5.9 accounting |
Lhr | 2008-12-18 | 5.12 accounting |
1188 bp (1188 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061112
> LD09786.complete CTATTAGTTAGCAAACACAAATTAAAACTCGGATTCTAAAAACATAGATT TTATTAAAGAAATTACCGTTAAGTGGTATATTAAAACATACGGATGAATT AGTACACAAATGTGTTGTAGAACGTTGGAGAAACACAGTGCGAAAAATAT TAAAATGAGTACCGACAGCGCCGAGGAAACGGTGATCCATTCCACTGTTC CCCATTTGGAGATTAACATATCAAACACCAACATCAGCGGCCAGATTGTT TTAAACGACTTGCTGCTCATGGAGATGCTCGCCCGGTATCCCTTCCTTAT CATCCCGCAGGTGGAGCCCAAAATGGACGTTGACTACGACTCCTGGGGTT GGGATCAGCTGGCCAAGTCCTTTAACCAAAGCTACGAGCACGTTGAGCTG AGTACTCCGTTCTCCGTAAGTGAACTGAAGCTGCGTTGGGTGAAGCTGCG CCCGCTGGTCAGAGCCTTGGCCGGTTCCAAAGGGCAAATCCCTGAACCTC TGTGGCGGGTGATGCACGATGTGCACATTCGCATGCAAGCCCCGAATCCG GCGGATGTGCCGAAAACCAAGTGTCAGGAGTTTCTTCTCAGTCAGTTGCC TTTCGTGAAATCTATGGCGCAAGCGGAACGCCGGCATTTAGAAGTGGAGG TCCTCGCCCTCATCCTGGAGCAAGAGCGCCAAGAGAAAGCTACTCGAAAG CTGGGTCCTAAGGACCTGGAGACGGTTCAGAGCGAATACGACGAATTTCT TAAAGCGATACGGGTGAAAGAGCTCCCAGCAGACAATTTACTCAGTCCGG CCATGGACAGATTCGGCATTAGCCCACACAAAATAAGACCCAATGTCGCA AGTGCCAATAAAAGAATCAGATATAATAATGCTTGCAAAGGATCAAATGA TGTCAAAATCAAAATAGAAACAGCTATTGAACCTAAAATTAAAGATACAA CAAAATGTGACGAACGACCGATAGAAACACCACGCTTCGTTCCTCTTAAA AGCGCGAAATACTACATTAAAAGGTGTCGCATCCGGCTGAAGCGAGTGGA AATTGATGATTATTTACCCTTAGCTAGAATACGGCGCTCAAGGCGGCCTA CGCTGAGAACATGACTTTCTTTCGTATAAAATGCACATAAGTTTATTAAA AAATACATTACTATAAATTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13318115..13319283 | 1..1169 | 5830 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17431051..17432220 | 1..1170 | 5850 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17432250..17433419 | 1..1170 | 5850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13318115..13319283 | 1..1169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lhr-RA | 1..1005 | 110..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lhr-RA | 1..1005 | 110..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lhr-RA | 1..1005 | 110..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lhr-RA | 1..1005 | 110..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lhr-RA | 1..1005 | 110..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lhr-RA | 1..1169 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lhr-RA | 1..1169 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lhr-RA | 20..1188 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lhr-RA | 1..1169 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lhr-RA | 20..1188 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17431051..17432219 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17431051..17432219 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17431051..17432219 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13318556..13319724 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17432250..17433418 | 1..1169 | 100 | Plus |
Translation from 109 to 1113
> LD09786.hyp MCCRTLEKHSAKNIKMSTDSAEETVIHSTVPHLEINISNTNISGQIVLND LLLMEMLARYPFLIIPQVEPKMDVDYDSWGWDQLAKSFNQSYEHVELSTP FSVSELKLRWVKLRPLVRALAGSKGQIPEPLWRVMHDVHIRMQAPNPADV PKTKCQEFLLSQLPFVKSMAQAERRHLEVEVLALILEQERQEKATRKLGP KDLETVQSEYDEFLKAIRVKELPADNLLSPAMDRFGISPHKIRPNVASAN KRIRYNNACKGSNDVKIKIETAIEPKIKDTTKCDERPIETPRFVPLKSAK YYIKRCRIRLKRVEIDDYLPLARIRRSRRPTLRT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lhr-PA | 334 | CG18468-PA | 1..334 | 1..334 | 1727 | 100 | Plus |
Translation from 109 to 1113
> LD09786.pep MCCRTLEKHSAKNIKMSTDSAEETVIHSTVPHLEINISNTNISGQIVLND LLLMEMLARYPFLIIPQVEPKMDVDYDSWGWDQLAKSFNQSYEHVELSTP FSVSELKLRWVKLRPLVRALAGSKGQIPEPLWRVMHDVHIRMQAPNPADV PKTKCQEFLLSQLPFVKSMAQAERRHLEVEVLALILEQERQEKATRKLGP KDLETVQSEYDEFLKAIRVKELPADNLLSPAMDRFGISPHKIRPNVASAN KRIRYNNACKGSNDVKIKIETAIEPKIKDTTKCDERPIETPRFVPLKSAK YYIKRCRIRLKRVEIDDYLPLARIRRSRRPTLRT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Lhr-PA | 321 | GF13120-PA | 17..316 | 35..329 | 525 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\Lhr-PA | 325 | GG20678-PA | 1..325 | 16..334 | 1244 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lhr-PA | 334 | CG18468-PA | 1..334 | 1..334 | 1727 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18576-PA | 414 | GI18576-PA | 1..230 | 16..250 | 394 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11424-PA | 429 | GL11424-PA | 24..291 | 28..289 | 475 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Lhr-PA | 414 | GA14945-PA | 7..271 | 15..272 | 461 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21773-PA | 237 | GM21773-PA | 1..223 | 16..222 | 919 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Lhr-PA | 335 | GD11266-PA | 1..335 | 16..334 | 1393 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Lhr-PA | 325 | GJ20370-PA | 9..321 | 32..328 | 558 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22897-PA | 354 | GK22897-PA | 9..354 | 32..329 | 533 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Lhr-PA | 325 | GE11661-PA | 1..325 | 16..334 | 1224 | 71.5 | Plus |