BDGP Sequence Production Resources |
Search the DGRC for LD09836
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 98 |
Well: | 36 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG12746-RE |
Protein status: | LD09836.pep: validated full length |
Preliminary Size: | 1487 |
Sequenced Size: | 1234 |
Gene | Date | Evidence |
---|---|---|
CG12746 | 2001-01-01 | Release 2 assignment |
CG12746 | 2001-11-09 | Blastp of sequenced clone |
CG12746 | 2008-04-29 | Release 5.5 accounting |
CG12746 | 2008-08-15 | Release 5.9 accounting |
CG12746 | 2008-12-18 | 5.12 accounting |
1234 bp (1234 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069390
> LD09836.complete TGAAAGGGGCTGGCTTCGCAGTTTGTTTTACGATGCTGTTGCGAGATTAG AGAAAGTTTATAAAAAGCCCTGCCATTAGCATTCAGCAGCATTAGCAATC GGGAAGCAGTCAAGTTGAAACCACGTCGGGATTAACGCCACCAGACTAAC AACGAGTGGATGCCCCAAGTGCAAACAGTTCCAAAGTCAACTCAAATATA CCCAAATCCCAGGAGATTGCATCGGATCGGGTGATAATGCCCGATAGTTG TACGGCGGACCTACGAAGTCGCCGCCGCGAAAATCCAATCGACCGCAACG GCAATATTGGCGGCACAGGCAAGGAGCAGGCGACAAGCACCAGGCCTAAG CTGACAACCGAATATACCCAACGGACTAACGAAATGACTGCGAGCAAGGA AGGTCAAGAATCCAGGCGAACCCTCAGCGACAGTTCCGCAGAGGACGTCA GGAATACAGGATCGAGGACCAGGACCAACGACGACGAAATGTGGCGCAAT GAACTTGCTATGAACACGGACAGCAGCTCCGTTCAGCCAGAAAAGCGAGA GGAACGAAGCCACAGAACAGGAAACTCTAATGCGAAGCTCAGCGATGCCG TAGATGTTGTTCTTCGCGTTCTCCTCGTCATTACCTTCTTCAAGTTGGAG ACGATGACAGCATTCAAACGGGAAATCCACGAGGAAGAGCTGTGGCTATA CAAGAACCCAAGGCGACCGGACATTGTCAGGGGCGGGGAGCTGCTCTTCT GGGTGATAGTGGCTCCCTTTCTGGTCACTATCGCCTTCTACTGGTACACA AGAGACAGGCGGCTCTGCATCGCTGTGATACCTCTGTTTATCGCACTGCT GGTTGCAGTTAGTCGCACCTGCGACTACCACCACCACTGGCAGGATGTGA CCATCGGCGGGCTGATTGGCCTGTTTGCAGGCTATATAAGCTACACACAA TACTATCCCTCCATCTTCTGCCCTGATGCCGGCATACCACTGGTCAGGTG GCCCAGCAGAGAGGGAAGCCAGTACCAGCGACTGTCTGGAAAGGACGACA ATGGCAGTCGTGGTCCCCACCATCTCGATGGTGGGGATGCGGTGCGGAGA CCTCTGCTCGCTGACAAGGAGGAGTCCAAATGGTACTAAAAGCTTTACGT AATATTATTGTGAGTGTTGCTTTCCCGTTTAAGGTTTTTAAACATATTAG ACAATTTCTGATTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12746-RE | 1613 | CG12746-RE | 1..811 | 2..812 | 4055 | 100 | Plus |
CG12746.b | 1273 | CG12746.b | 28..511 | 329..812 | 2420 | 100 | Plus |
CG12746.a | 1270 | CG12746.a | 26..508 | 330..812 | 2415 | 100 | Plus |
CG12746-RE | 1613 | CG12746-RE | 1143..1554 | 808..1219 | 2060 | 100 | Plus |
CG12746.b | 1273 | CG12746.b | 843..1254 | 808..1219 | 2060 | 100 | Plus |
CG12746.a | 1270 | CG12746.a | 840..1251 | 808..1219 | 2060 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1392688..1393094 | 808..1214 | 2035 | 100 | Plus |
chr3R | 27901430 | chr3R | 1390784..1391113 | 1..330 | 1650 | 100 | Plus |
chr3R | 27901430 | chr3R | 1391745..1392057 | 328..640 | 1565 | 100 | Plus |
chr3R | 27901430 | chr3R | 1392126..1392297 | 641..812 | 860 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5567029..5567440 | 808..1219 | 2060 | 100 | Plus |
3R | 32079331 | 3R | 5565125..5565454 | 1..330 | 1650 | 100 | Plus |
3R | 32079331 | 3R | 5566086..5566398 | 328..640 | 1565 | 100 | Plus |
3R | 32079331 | 3R | 5566467..5566638 | 641..812 | 860 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5307860..5308271 | 808..1219 | 2060 | 100 | Plus |
3R | 31820162 | 3R | 5305956..5306285 | 1..330 | 1650 | 100 | Plus |
3R | 31820162 | 3R | 5306917..5307229 | 328..640 | 1565 | 100 | Plus |
3R | 31820162 | 3R | 5307298..5307469 | 641..812 | 860 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1390784..1391112 | 1..329 | 100 | -> | Plus |
chr3R | 1391747..1392057 | 330..640 | 100 | -> | Plus |
chr3R | 1392126..1392293 | 641..808 | 100 | -> | Plus |
chr3R | 1392689..1393094 | 809..1214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RE | 1..431 | 384..813 | 99 | <- | Plus |
CG12746-RE | 767..1092 | 814..1139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RE | 1..431 | 384..813 | 99 | <- | Plus |
CG12746-RE | 767..1092 | 814..1139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RB | 1..431 | 384..813 | 99 | <- | Plus |
CG12746-RB | 767..1092 | 814..1139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RE | 1..431 | 384..813 | 99 | <- | Plus |
CG12746-RE | 767..1092 | 814..1139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RB | 1..431 | 384..813 | 99 | <- | Plus |
CG12746-RB | 767..1092 | 814..1139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RE | 1..773 | 42..813 | 99 | <- | Plus |
CG12746-RE | 1109..1509 | 814..1214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RE | 1109..1509 | 814..1214 | 100 | Plus | |
CG12746-RE | 1..773 | 42..813 | 99 | <- | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RE | 1..773 | 42..813 | 99 | <- | Plus |
CG12746-RE | 1109..1509 | 814..1214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RE | 1..773 | 42..813 | 99 | <- | Plus |
CG12746-RE | 1109..1509 | 814..1214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RE | 1..773 | 42..813 | 99 | <- | Plus |
CG12746-RE | 1109..1509 | 814..1214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5566467..5566634 | 641..808 | 100 | -> | Plus |
3R | 5565125..5565453 | 1..329 | 100 | -> | Plus |
3R | 5566088..5566398 | 330..640 | 100 | -> | Plus |
3R | 5567030..5567435 | 809..1214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5566467..5566634 | 641..808 | 100 | -> | Plus |
3R | 5565125..5565453 | 1..329 | 100 | -> | Plus |
3R | 5566088..5566398 | 330..640 | 100 | -> | Plus |
3R | 5567030..5567435 | 809..1214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5566467..5566634 | 641..808 | 100 | -> | Plus |
3R | 5565125..5565453 | 1..329 | 100 | -> | Plus |
3R | 5566088..5566398 | 330..640 | 100 | -> | Plus |
3R | 5567030..5567435 | 809..1214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1390847..1391175 | 1..329 | 100 | -> | Plus |
arm_3R | 1391810..1392120 | 330..640 | 100 | -> | Plus |
arm_3R | 1392189..1392356 | 641..808 | 100 | -> | Plus |
arm_3R | 1392752..1393157 | 809..1214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5305956..5306284 | 1..329 | 100 | -> | Plus |
3R | 5306919..5307229 | 330..640 | 100 | -> | Plus |
3R | 5307298..5307465 | 641..808 | 100 | -> | Plus |
3R | 5307861..5308266 | 809..1214 | 100 | Plus |
Translation from 236 to 1138
> LD09836.pep MPDSCTADLRSRRRENPIDRNGNIGGTGKEQATSTRPKLTTEYTQRTNEM TASKEGQESRRTLSDSSAEDVRNTGSRTRTNDDEMWRNELAMNTDSSSVQ PEKREERSHRTGNSNAKLSDAVDVVLRVLLVITFFKLETMTAFKREIHEE ELWLYKNPRRPDIVRGGELLFWVIVAPFLVTIAFYWYTRDRRLCIAVIPL FIALLVAVSRTCDYHHHWQDVTIGGLIGLFAGYISYTQYYPSIFCPDAGI PLVRWPSREGSQYQRLSGKDDNGSRGPHHLDGGDAVRRPLLADKEESKWY *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11605-PA | 356 | GF11605-PA | 1..158 | 50..199 | 509 | 63 | Plus |
Dana\GF11605-PA | 356 | GF11605-PA | 252..356 | 192..300 | 416 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12892-PA | 409 | GG12892-PA | 1..221 | 1..210 | 823 | 77.5 | Plus |
Dere\GG12892-PA | 409 | GG12892-PA | 304..409 | 192..300 | 479 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22403-PA | 342 | GH22403-PA | 247..342 | 192..300 | 331 | 56.9 | Plus |
Dgri\GH22403-PA | 342 | GH22403-PA | 6..135 | 58..192 | 281 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12746-PE | 363 | CG12746-PE | 1..143 | 50..192 | 738 | 100 | Plus |
CG12746-PD | 363 | CG12746-PD | 1..143 | 50..192 | 738 | 100 | Plus |
CG12746-PB | 363 | CG12746-PB | 1..143 | 50..192 | 738 | 100 | Plus |
CG12746-PE | 363 | CG12746-PE | 255..363 | 192..300 | 601 | 100 | Plus |
CG12746-PD | 363 | CG12746-PD | 255..363 | 192..300 | 601 | 100 | Plus |
CG12746-PB | 363 | CG12746-PB | 255..363 | 192..300 | 601 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24490-PA | 340 | GI24490-PA | 246..316 | 192..262 | 302 | 73.2 | Plus |
Dmoj\GI24490-PA | 340 | GI24490-PA | 34..134 | 85..192 | 274 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21673-PA | 359 | GL21673-PA | 1..146 | 50..192 | 440 | 59.9 | Plus |
Dper\GL21673-PA | 359 | GL21673-PA | 258..359 | 192..300 | 389 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11785-PA | 359 | GA11785-PA | 1..146 | 50..192 | 443 | 60.5 | Plus |
Dpse\GA11785-PA | 359 | GA11785-PA | 258..359 | 192..300 | 394 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10814-PA | 407 | GM10814-PA | 1..221 | 1..210 | 863 | 82 | Plus |
Dsec\GM10814-PA | 407 | GM10814-PA | 304..407 | 192..300 | 528 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19793-PA | 407 | GD19793-PA | 1..172 | 1..170 | 705 | 87.8 | Plus |
Dsim\GD19793-PA | 407 | GD19793-PA | 301..407 | 192..300 | 536 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24555-PA | 327 | GJ24555-PA | 1..135 | 50..192 | 358 | 49 | Plus |
Dvir\GJ24555-PA | 327 | GJ24555-PA | 247..326 | 192..299 | 257 | 50.9 | Plus |
Translation from 236 to 1138
> LD09836.hyp MPDSCTADLRSRRRENPIDRNGNIGGTGKEQATSTRPKLTTEYTQRTNEM TASKEGQESRRTLSDSSAEDVRNTGSRTRTNDDEMWRNELAMNTDSSSVQ PEKREERSHRTGNSNAKLSDAVDVVLRVLLVITFFKLETMTAFKREIHEE ELWLYKNPRRPDIVRGGELLFWVIVAPFLVTIAFYWYTRDRRLCIAVIPL FIALLVAVSRTCDYHHHWQDVTIGGLIGLFAGYISYTQYYPSIFCPDAGI PLVRWPSREGSQYQRLSGKDDNGSRGPHHLDGGDAVRRPLLADKEESKWY *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12746-PE | 363 | CG12746-PE | 1..143 | 50..192 | 738 | 100 | Plus |
CG12746-PD | 363 | CG12746-PD | 1..143 | 50..192 | 738 | 100 | Plus |
CG12746-PB | 363 | CG12746-PB | 1..143 | 50..192 | 738 | 100 | Plus |
CG12746-PE | 363 | CG12746-PE | 255..363 | 192..300 | 601 | 100 | Plus |
CG12746-PD | 363 | CG12746-PD | 255..363 | 192..300 | 601 | 100 | Plus |
CG12746-PB | 363 | CG12746-PB | 255..363 | 192..300 | 601 | 100 | Plus |