BDGP Sequence Production Resources |
Search the DGRC for LD09945
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 99 |
Well: | 45 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG3587-RA |
Protein status: | LD09945.pep: gold |
Preliminary Size: | 1261 |
Sequenced Size: | 1084 |
Gene | Date | Evidence |
---|---|---|
CG3587 | 2001-01-01 | Release 2 assignment |
CG3587 | 2001-10-10 | Blastp of sequenced clone |
CG3587 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3587 | 2008-04-29 | Release 5.5 accounting |
CG3587 | 2008-08-15 | Release 5.9 accounting |
CG3587 | 2008-12-18 | 5.12 accounting |
1084 bp (1084 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061115
> LD09945.complete CGACACCTACTTTGTTTATTTATTGTTATTAATTAGGAAGCATGCCCCTC GTGGTGATTACGGGCCTGCCAGCCAGCGGAAAGAGCACACGTGCCCGCCA GCTACGGGATCATTTCGTGGAGCGCGGCAGGAAGGTGCATCTAATCAGCG AAAACGAGGCAGTGCCCAAGGCGGGTTTTGGAAAGAATTCCCATACAGGT GATTCGCAGAAGGAGAAGGTGGTACGTAGCGATCTTAAGTCGGAAGCCTC GCGTCACCTTAACCAGGAGGATCTGGTCATCTTGGACGCCGGGAACTACA TCAAAGGCTACCGCTACGAATTGTACTGCATGTCCAAGGTGTCAAGGACC ACCCAGTGCACTGTGTTTACCTGCATACCCCAGGAGGAGGCGTGGACCTT TAATAGCCAAAGAACGGCGCCGGATGAACTGCCTGGCGACAGTGAAAGAG TTCAGCCGGTGGACAACTCGGATGTTCCCTACACCAGAGAGACTTTTGAT GCTCTGTGCCAGCGCTACGAGGAGCCGCAGAGCAACAACCGTTGGGACAG TCCGCTGGTGGTAGTCTTGCCCAAGGACACGCTCGACATGGAGGCCATCT ACAAGGCCTTGTACGAGTCCCAGCCACTGCCACCCAACCAGAGTACTTAT AATGCACCGCTGGGAACAACCAACTACCTGTTCGAACTGGACAAAATCGT GCAGGCGATCATCAAGGAGATCCTCGGCGCCGTCAAGATCAAGGCCTTCG GCCAGCTGCGCATCCCAGGGAGCAGAAATCCCGTGAAGGTCGCCACTTCG ATGAATGCCCTCCAGCTGAACCGCCTGCGCCAGAAGTTCATCACGAGCAC GTGCCACGCCAGCCAGACGTCACCCACTCCGCTGGAGCAGGTGCCGCACT TGTTCGTGCAGTTCATCAATGCCAACACGATCGGCTGCTAGCACTGTGAT TGCGACAAGACAAATGCTAAAATAAAGTTCTTACCTCGGGCAGCAGGATA ATGTTTTTGGGCTGATGTTGACACAATTTAATGTGGAAATCAAATAAAAT ATGTAGCTTAAATACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1834970..1835382 | 654..1066 | 2065 | 100 | Plus |
chrX | 22417052 | chrX | 1834554..1834903 | 305..654 | 1750 | 100 | Plus |
chrX | 22417052 | chrX | 1834195..1834498 | 4..307 | 1520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1834192..1834497 | 1..306 | 99 | -> | Plus |
chrX | 1834556..1834902 | 307..653 | 100 | -> | Plus |
chrX | 1834970..1835382 | 654..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3587-RA | 1..900 | 42..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3587-RA | 1..900 | 42..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3587-RA | 1..900 | 42..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3587-RA | 1..900 | 42..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3587-RA | 1..900 | 42..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3587-RA | 111..1176 | 1..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3587-RA | 111..1176 | 1..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3587-RA | 111..1176 | 1..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3587-RA | 111..1176 | 1..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3587-RA | 40..1105 | 1..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1940346..1940651 | 1..306 | 100 | -> | Plus |
X | 1940710..1941056 | 307..653 | 100 | -> | Plus |
X | 1941124..1941536 | 654..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1940346..1940651 | 1..306 | 100 | -> | Plus |
X | 1940710..1941056 | 307..653 | 100 | -> | Plus |
X | 1941124..1941536 | 654..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1940346..1940651 | 1..306 | 100 | -> | Plus |
X | 1940710..1941056 | 307..653 | 100 | -> | Plus |
X | 1941124..1941536 | 654..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1834379..1834684 | 1..306 | 100 | -> | Plus |
arm_X | 1834743..1835089 | 307..653 | 100 | -> | Plus |
arm_X | 1835157..1835569 | 654..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1948444..1948749 | 1..306 | 100 | -> | Plus |
X | 1948808..1949154 | 307..653 | 100 | -> | Plus |
X | 1949222..1949634 | 654..1066 | 100 | Plus |
Translation from 41 to 940
> LD09945.pep MPLVVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKNS HTGDSQKEKVVRSDLKSEASRHLNQEDLVILDAGNYIKGYRYELYCMSKV SRTTQCTVFTCIPQEEAWTFNSQRTAPDELPGDSERVQPVDNSDVPYTRE TFDALCQRYEEPQSNNRWDSPLVVVLPKDTLDMEAIYKALYESQPLPPNQ STYNAPLGTTNYLFELDKIVQAIIKEILGAVKIKAFGQLRIPGSRNPVKV ATSMNALQLNRLRQKFITSTCHASQTSPTPLEQVPHLFVQFINANTIGC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22188-PA | 300 | GF22188-PA | 1..300 | 1..299 | 1362 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12894-PA | 299 | GG12894-PA | 1..299 | 1..299 | 1543 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17893-PA | 300 | GH17893-PA | 1..300 | 1..299 | 1200 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3587-PA | 299 | CG3587-PA | 1..299 | 1..299 | 1559 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21683-PA | 298 | GI21683-PA | 1..298 | 1..299 | 1152 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15252-PA | 299 | GL15252-PA | 1..299 | 1..299 | 1252 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17539-PA | 299 | GA17539-PA | 1..299 | 1..299 | 1252 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19183-PA | 299 | GM19183-PA | 1..299 | 1..299 | 1569 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16579-PA | 299 | GD16579-PA | 1..299 | 1..299 | 1575 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15862-PA | 299 | GJ15862-PA | 1..299 | 1..299 | 1238 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25181-PA | 293 | GK25181-PA | 1..293 | 1..299 | 1220 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16225-PA | 299 | GE16225-PA | 1..299 | 1..299 | 1528 | 94.3 | Plus |
Translation from 41 to 940
> LD09945.hyp MPLVVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKNS HTGDSQKEKVVRSDLKSEASRHLNQEDLVILDAGNYIKGYRYELYCMSKV SRTTQCTVFTCIPQEEAWTFNSQRTAPDELPGDSERVQPVDNSDVPYTRE TFDALCQRYEEPQSNNRWDSPLVVVLPKDTLDMEAIYKALYESQPLPPNQ STYNAPLGTTNYLFELDKIVQAIIKEILGAVKIKAFGQLRIPGSRNPVKV ATSMNALQLNRLRQKFITSTCHASQTSPTPLEQVPHLFVQFINANTIGC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3587-PA | 299 | CG3587-PA | 1..299 | 1..299 | 1559 | 100 | Plus |