BDGP Sequence Production Resources |
Search the DGRC for LD09950
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 99 |
Well: | 50 |
Vector: | pBS SK- |
Associated Gene/Transcript | Mo25-RA |
Protein status: | LD09950.pep: gold |
Preliminary Size: | 2109 |
Sequenced Size: | 1894 |
Gene | Date | Evidence |
---|---|---|
CG4083 | 2001-01-01 | Release 2 assignment |
CG4083 | 2002-06-13 | Blastp of sequenced clone |
CG4083 | 2003-01-01 | Sim4 clustering to Release 3 |
Mo25 | 2008-04-29 | Release 5.5 accounting |
Mo25 | 2008-08-15 | Release 5.9 accounting |
Mo25 | 2008-12-18 | 5.12 accounting |
1894 bp (1894 high quality bases) assembled on 2002-06-13
GenBank Submission: AY128438
> LD09950.complete CCTGGAAGAAGACAAGAAAAAAATAATATATAATAATAGAATATTCCACC GTGATAATATTGCCAAGCATTGTTTTCCGCGTCTTTGCCGTCGGTAATTG GGCAACAGTCAGAACGACCAAAAAGCCGAAGGGCCCCGAACAGCAGGATA ATCGGCAGAAAGTACGAGGCATCATCGACAGGCCAACTAAACCACAACGA CAACCACATCCGCAGTCAAATCCCAATCCAAATCCACGTCCAAATCCCAT TTCGAGTGAAACAGCGAGTGAGACAGCGAAATGCCACTGTTCGGGAAGTC ACAGAAGTCGCCAGTGGAGCTGGTCAAGTCGCTGAAGGAGGCGATCAACG CCCTGGAGGCGGGCGACCGCAAGGTGGAGAAGGCGCAGGAGGACGTCAGC AAGAACCTGGTCTCGATCAAGAACATGCTGTACGGTAGCAGCGATGCCGA GCCGCCGGCGGACTACGTGGTGGCCCAGCTGTCCCAGGAGCTGTACAACA GCAACCTGCTGCTGCTGCTCATCCAGAACCTGCACCGCATCGATTTCGAG GGCAAGAAGCATGTGGCGCTCATTTTCAATAATGTGCTGCGCCGCCAGAT TGGCACCCGTTCGCCCACCGTCGAGTATATATGCACGAAGCCGGAGATCC TGTTCACCCTGATGGCCGGCTACGAAGATGCGCATCCGGAGATCGCACTG AACTCCGGTACCATGCTGAGGGAGTGCGCCCGGTACGAGGCGCTGGCCAA GATCATGCTGCACTCGGATGAGTTCTTCAAGTTCTTCCGCTACGTGGAGG TTTCCACCTTTGACATTGCCAGCGATGCCTTTTCTACGTTCAAGGAGCTG CTCACGCGCCATAAGCTGCTGTGCGCGGAGTTTCTGGACGCCAACTACGA CAAGTTCTTCTCGCAGCACTACCAGCGCCTGCTCAACTCGGAGAACTATG TGACGCGGCGTCAGAGCTTGAAGCTGCTTGGGGAACTGCTGCTGGACCGG CACAATTTCACCGTGATGACGCGCTACATATCCGAGCCGGAGAACCTCAA GCTAATGATGAACATGCTCAAGGAAAAGTCGCGCAACATTCAGTTCGAGG CGTTTCACGTCTTCAAGGTGTTCGTGGCCAATCCCAACAAGCCGAAGCCC ATTCTGGACATCCTGCTGCGCAACCAGACGAAGCTGGTCGACTTTCTGAC CAACTTCCATACGGATCGCTCCGAGGACGAGCAGTTCAACGACGAGAAGG CCTATCTGATCAAGCAGATAAAGGAGCTGAAGCCGCTGCCCGAGGCTTAG TTGGACCTCCACCTCGGCTCCAACTTCAGCTCCAACTCCAGCTCCAGCGT CCCGGGGGCAAAAGGACCGTAGCCAGAAGCCAGAAGCGATCGATACGGAA GCAGAGAGAGCGATGGTGGGTTAGCAGGATGTGAACATGTTTTGTGTGTG GGTTAAAGCAAATATATATTATATACTATATTTTGTGACGCTGATGACTC TACACTTGTGAGTAACTAAACAATAATTTAGACAACAACAAAAACAACAC TGATGATGATAATGATAAAAATAACGATAAAGCGAATTAGAAAACAAGAA AAAGTACGAGTAAATAGCGTAACGCCGAAAAATAAAACTGTACCGAGAGT TTCGAATTTAACATAGCCACATTTAGACATTCTGGGCCTAGAGATCCGCT ATCCTATTATACAGATATGTTTAACCATTCGTCGATCCTCCGCGAAGTAA TCCCCCTTCCTTTCCAGACCCTTTTTTTCGATATCCATTTAACTAGTTGT TGTATTTAAAATTTGATCGTTTTTGAAACGAGATATCCCTTCACCGCCTT GACCTGCCACGCCCCTTTTGCGCCCCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mo25-RA | 2255 | Mo25-RA | 24..1911 | 1..1888 | 9440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16603316..16605191 | 1876..1 | 9350 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16613562..16615449 | 1888..1 | 9440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16606662..16608549 | 1888..1 | 9440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 1116..1185 | 1522..1597 | 114 | 65.8 | Plus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 887..958 | 1532..1602 | 114 | 63.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16603316..16603611 | 1581..1876 | 100 | == | Minus |
chr3L | 16603674..16605191 | 1..1518 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mo25-RA | 1..1020 | 281..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mo25-RA | 1..1020 | 281..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mo25-RA | 1..1020 | 281..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mo25-RA | 1..1020 | 281..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mo25-RA | 1..1020 | 281..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mo25-RA | 24..1899 | 1..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mo25-RA | 24..1899 | 1..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mo25-RA | 24..1899 | 1..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mo25-RA | 24..1899 | 1..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mo25-RA | 24..1899 | 1..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16613574..16615449 | 1..1876 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16613574..16615449 | 1..1876 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16613574..16615449 | 1..1876 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16606674..16608549 | 1..1876 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16606674..16608549 | 1..1876 | 100 | Minus |
Translation from 280 to 1299
> LD09950.hyp MPLFGKSQKSPVELVKSLKEAINALEAGDRKVEKAQEDVSKNLVSIKNML YGSSDAEPPADYVVAQLSQELYNSNLLLLLIQNLHRIDFEGKKHVALIFN NVLRRQIGTRSPTVEYICTKPEILFTLMAGYEDAHPEIALNSGTMLRECA RYEALAKIMLHSDEFFKFFRYVEVSTFDIASDAFSTFKELLTRHKLLCAE FLDANYDKFFSQHYQRLLNSENYVTRRQSLKLLGELLLDRHNFTVMTRYI SEPENLKLMMNMLKEKSRNIQFEAFHVFKVFVANPNKPKPILDILLRNQT KLVDFLTNFHTDRSEDEQFNDEKAYLIKQIKELKPLPEA*
Translation from 280 to 1299
> LD09950.pep MPLFGKSQKSPVELVKSLKEAINALEAGDRKVEKAQEDVSKNLVSIKNML YGSSDAEPPADYVVAQLSQELYNSNLLLLLIQNLHRIDFEGKKHVALIFN NVLRRQIGTRSPTVEYICTKPEILFTLMAGYEDAHPEIALNSGTMLRECA RYEALAKIMLHSDEFFKFFRYVEVSTFDIASDAFSTFKELLTRHKLLCAE FLDANYDKFFSQHYQRLLNSENYVTRRQSLKLLGELLLDRHNFTVMTRYI SEPENLKLMMNMLKEKSRNIQFEAFHVFKVFVANPNKPKPILDILLRNQT KLVDFLTNFHTDRSEDEQFNDEKAYLIKQIKELKPLPEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10513-PA | 339 | GF10513-PA | 1..339 | 1..339 | 1761 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15862-PA | 339 | GG15862-PA | 1..339 | 1..339 | 1788 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16454-PA | 339 | GH16454-PA | 1..339 | 1..339 | 1765 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mo25-PB | 339 | CG4083-PB | 1..339 | 1..339 | 1728 | 100 | Plus |
Mo25-PA | 339 | CG4083-PA | 1..339 | 1..339 | 1728 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16711-PA | 339 | GI16711-PA | 1..339 | 1..339 | 1770 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12722-PA | 339 | GL12722-PA | 1..339 | 1..339 | 1765 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17944-PA | 339 | GA17944-PA | 1..339 | 1..339 | 1774 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24380-PA | 323 | GM24380-PA | 1..323 | 1..339 | 1470 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12453-PA | 339 | GD12453-PA | 1..339 | 1..339 | 1793 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12454-PA | 339 | GJ12454-PA | 1..339 | 1..339 | 1770 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17738-PA | 339 | GK17738-PA | 1..339 | 1..339 | 1775 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22202-PA | 339 | GE22202-PA | 1..339 | 1..339 | 1793 | 100 | Plus |