![]() | BDGP Sequence Production Resources |
Search the DGRC for LD10028
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 100 |
Well: | 28 |
Vector: | pBS SK- |
Associated Gene/Transcript | mRpL44-RA |
Protein status: | LD10028.pep: gold |
Preliminary Size: | 1350 |
Sequenced Size: | 1127 |
Gene | Date | Evidence |
---|---|---|
CG2109 | 2001-01-01 | Release 2 assignment |
CG2109 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2109 | 2003-01-14 | Blastp of sequenced clone |
mRpL44 | 2008-04-29 | Release 5.5 accounting |
mRpL44 | 2008-08-15 | Release 5.9 accounting |
mRpL44 | 2008-12-18 | 5.12 accounting |
1127 bp (1127 high quality bases) assembled on 2003-01-14
GenBank Submission: AY069395
> LD10028.complete AAAACATATTCGTTACTTATTTTTAAGATCGCTTTAAAGATGTCATTCTT ACGCAGTGCTGTTGGTCTCCTGGCTCGTGTCAAGCTCTTGGAGGGCTCAC CGACTGTGCAAACGAGGCGCCACATCAAGCGATGGGTTTCGCCAACGTTA CGTGAGCTCGCCCACCGGCAGAAGAAACTAGGACCACAAAAGCCAGAGCG GCGTTCTGGGTTCGTGGAGTGGAACCAGCGATCGGAGCTCTTCGCGTTCG GCAAGCGTTTGGGCGAATCCTTTGAATTGTCGGAGCTGCAGCGTGCTTTT ACAGAGAAATCGTTTGCAGAGCGGGAGGAGGATCGTCGTCGGCAGCTAGG CATTGAGGAGTCTGACCTCCAGATGCCTCACAATAGCGATCTGGTCGAGA AGGGCCAACAAATTGCCCGTGCCTACGTTGAGGCCTTCCTGCAGCACCAG TTACCGAAGGTCCCTAATGAAGGACTCCAGGCGATCGCCAGTTATCTACT TAGCACCGAAACGCTTGCTCACGTCTCGACCCACCTGGGCACAAAGGATC TGATACAGTCTACGGAATACCCGCCCTCGGCCGAAAGTCAGGCCAAATCT TTACACGCAGTTATTGGCGCCCTGGCCAGTTCCAGTGGAATCGAGAGGGC TTTCATTTTTGTACGCGATTTCATCTGCACGCAACTGAATCAAAAGGACC TGTTGGAGGTGTGGACTCCCCAGGAACCAATCCAGCTGCTGGAGAAGATA TGCCAGGAGCGAAAGCTGGGCGAAGCGGAGCCCCGCCTGCTTGGAGACTG CGGAAAGAACACTGTGCTAGCCGCCTACCAAGTAGGCATCTACGCCAACC GGCAGCTACTGGGCAAGGGATTCGGTGAAGATGTGAAAACAGCCACAGAG ACTGCGGCACTCGACGCTCTGCAGAGCATCTTTGACACCCGCGACAACCG GAGACCCTTTGACTTTGCCATTCAGCTAGAACCAAAGACCGTGCGACTTG GCTGAGAATCAAAACTGGCTCTGCGTCCTTGTTGATTATTGTAATTTGCA CTAAACACATGTACGCATGCATTGTCAGAAAAGATTGCGTTTTAAAATCA TTTAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL44-RA | 1181 | mRpL44-RA | 78..1181 | 1..1104 | 5520 | 100 | Plus |
CG12162-RA | 1714 | CG12162-RA | 1555..1714 | 1105..946 | 800 | 100 | Minus |
CG12162-RB | 1744 | CG12162-RB | 1585..1744 | 1105..946 | 800 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1296171..1296276 | 1..106 | 100 | Minus | |
chr3R | 1295122..1296118 | 107..1103 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL44-RA | 1..966 | 40..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL44-RA | 1..966 | 40..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL44-RA | 1..966 | 40..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL44-RA | 1..966 | 40..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL44-RA | 1..966 | 40..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL44-RA | 44..1146 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL44-RA | 44..1146 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL44-RA | 20..1122 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL44-RA | 15..1117 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL44-RA | 20..1122 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5469463..5470459 | 107..1103 | 100 | <- | Minus |
3R | 5470512..5470617 | 1..106 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5469463..5470459 | 107..1103 | 100 | <- | Minus |
3R | 5470512..5470617 | 1..106 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5469463..5470459 | 107..1103 | 100 | <- | Minus |
3R | 5470512..5470617 | 1..106 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1296234..1296339 | 1..106 | 100 | Minus | |
arm_3R | 1295185..1296181 | 107..1103 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5210294..5211290 | 107..1103 | 100 | <- | Minus |
3R | 5211343..5211448 | 1..106 | 100 | Minus |
Translation from 0 to 1004
> LD10028.hyp KTYSLLIFKIALKMSFLRSAVGLLARVKLLEGSPTVQTRRHIKRWVSPTL RELAHRQKKLGPQKPERRSGFVEWNQRSELFAFGKRLGESFELSELQRAF TEKSFAEREEDRRRQLGIEESDLQMPHNSDLVEKGQQIARAYVEAFLQHQ LPKVPNEGLQAIASYLLSTETLAHVSTHLGTKDLIQSTEYPPSAESQAKS LHAVIGALASSSGIERAFIFVRDFICTQLNQKDLLEVWTPQEPIQLLEKI CQERKLGEAEPRLLGDCGKNTVLAAYQVGIYANRQLLGKGFGEDVKTATE TAALDALQSIFDTRDNRRPFDFAIQLEPKTVRLG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL44-PA | 321 | CG2109-PA | 1..321 | 14..334 | 1629 | 100 | Plus |
Translation from 39 to 1004
> LD10028.pep MSFLRSAVGLLARVKLLEGSPTVQTRRHIKRWVSPTLRELAHRQKKLGPQ KPERRSGFVEWNQRSELFAFGKRLGESFELSELQRAFTEKSFAEREEDRR RQLGIEESDLQMPHNSDLVEKGQQIARAYVEAFLQHQLPKVPNEGLQAIA SYLLSTETLAHVSTHLGTKDLIQSTEYPPSAESQAKSLHAVIGALASSSG IERAFIFVRDFICTQLNQKDLLEVWTPQEPIQLLEKICQERKLGEAEPRL LGDCGKNTVLAAYQVGIYANRQLLGKGFGEDVKTATETAALDALQSIFDT RDNRRPFDFAIQLEPKTVRLG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17708-PA | 321 | GF17708-PA | 1..321 | 1..321 | 1333 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11001-PA | 321 | GG11001-PA | 1..321 | 1..321 | 1615 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18997-PA | 321 | GH18997-PA | 1..320 | 1..320 | 1233 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL44-PA | 321 | CG2109-PA | 1..321 | 1..321 | 1629 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24499-PA | 321 | GI24499-PA | 1..321 | 1..321 | 1204 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22164-PA | 322 | GL22164-PA | 1..321 | 1..321 | 1304 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15248-PA | 322 | GA15248-PA | 1..321 | 1..321 | 1302 | 75.1 | Plus |
Dpse\GA22259-PA | 137 | GA22259-PA | 1..73 | 191..264 | 270 | 68.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10632-PA | 321 | GM10632-PA | 1..321 | 1..321 | 1653 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19616-PA | 321 | GD19616-PA | 1..321 | 1..321 | 1641 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24564-PA | 321 | GJ24564-PA | 1..321 | 1..321 | 1259 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11851-PA | 321 | GK11851-PA | 1..321 | 1..321 | 1177 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25279-PA | 321 | GE25279-PA | 1..320 | 1..320 | 1513 | 88.4 | Plus |