BDGP Sequence Production Resources |
Search the DGRC for LD10043
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 100 |
Well: | 43 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG9004-RA |
Protein status: | LD10043.pep: gold |
Preliminary Size: | 2634 |
Sequenced Size: | 2735 |
Gene | Date | Evidence |
---|---|---|
CG9004 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9004 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9004 | 2003-08-11 | Blastp of sequenced clone |
CG9004 | 2008-04-29 | Release 5.5 accounting |
CG9004 | 2008-08-15 | Release 5.9 accounting |
CG9004 | 2008-12-18 | 5.12 accounting |
2735 bp (2735 high quality bases) assembled on 2003-08-11
GenBank Submission: BT010298
> LD10043.complete ATTGTCAACCACAACAATTTTTAAATTCGGTCCGGCTGAAATCTCTGGTA AAGGCCGTTTAAAATGGCAAAAATAAAGAAAAAGGAGGCGAAAGCTAAAC CTTTGACTCGCAAGGAGCAGAGAAAACAGAAGTCGGAGTTCAAAAAACAG AATAAACGACTTTATTTCGCCGGCAAAACTAACGGAACACAGCGCGTGGC GGCGGCGGCAGAGGCGTTGGCAGCGCAGTCGCAGCTGGGCAAAAACAAGA AGAAGAAACGGAGCAAGAAGCCCAAAATAATAAATCCAGATGAAATACCC AAGGAGCAACTTTTGTCCGGTGAAATAGACAGCGACGATGACGAGTCCAT AGATTCGGATTTCAGCGATGCGGAGGTGGATGCTCTGCTGCCCGCAAGGG AAAAGATGGAAGTCTATGAACCTCTGGGAAAAAAGGTCAAGAAAACGACA GGAGGCGCCATCCAAAGACAGGATGAAGAGGCGGTCAGGCGGAAGGAACT GCGCCAGCAAAAGGAACTGGAGAGCAAGTCCAAGAAGCAGCGAATCAAGC AACTTCGCATAGAGAACGAGGAGGATGATCGCGAGATCAACAAGCTGGAA AAGAAGCTGAAGCTCAACAAATCCAAGGACAAAAACCGCTTGGTGCGGAA GATGTTCAATGATGGCCTGGACTACCTGCTTGACTTTGTCCTGGATGACG AGGAGGAGAAGCGGAAGTGGGAGGAGAAGCAGGAACGTAAGAAAAAGCTG AAGGAGCAGCAAGAAAAGGAGGAGGCGGGAATGTGGAGCGATGAGGAAGA GGATAAGGAGGACAGGGATGAGCCCATGGATAACTTCTCAGAAGATGACA GTGGCTCTGAGGGTGAAGATGATGATGAAGACCTAACTGGAGAGGAAGAA CAAAGCGAGGAGGATTCGGAGCAGGAAGAGAATGCACCTAAGATTAAAGA GGACATCTACGGACGCAAACGCGACGCCGAGGGAAACATCCTGCCTGATC CCGTGGAGCTCGAGGCCTCAGCCGCCGGTCAAAAGTACATACCGCCACAT CAGCGAGCTTTGATGGCAGCCAGCGCGGGATCAAGTGAAAAACAGGCAGA GATACTAGCTCGCCTTCTAAAGCAATGCAAGGGTCTGCTCAATCGTTTGT CAGAAGCGAATCTGCACAAGATTGCCGCCGGCATCGAGGAGCTGTACATG AAAAACTCCCGCTACAACATGAACGAAACACTAACCAAGTTAATTCAAGA AGCCCTTCTCGGCTACACGCGAACCAACGAGCGAATGGTACAGGAACACA TGGTGCTGCTGGCCTACCTACATGCCCAGGTTGGCAGCGAGATTGGAGCG CATTTCCTGCAGACTTTTGTGGAGTTATTCGATGGTTATGTCAAGAACAT CGCTACCCTGGAGGTGGAGGATAAGCAGCTGAATAACCTAGTACTGGTGC TCTGCTACATGTACCTCTTCAAGATCTACGAGCTGAATTTGCTGATGGAG CTCATAGGCAAATTGTCAGATCAGCTTTGCGAGAAGAGCGTGGAGTGCCT TTTGCTGATCTTCCAGTCCATTGGCTTCCGGCTGCGCAAGGACGATCCAC TGGCCTTTAAGACCATGATGCAAAAAGTTCAATCGCAAATTGCTAGTGCC CCACTGGAACTGAAAGAGAATCCACGCCTGCGTTTCATGGTCGATATTCT AAATGCAGTCAAAAACAACAATATGCAAAAGCTGCCGCAGTATGATCCCG AGTTGGCGGAGAATCTGCGAAAGCGTTTGAAGGCCATGCTGAAGAATGAT CGCTACGTGGTGACTCTGAACATAACCCTGGAGGACCTCCTGCGTGCTGA TAAAGTGGGCAAATGGTGGATTGTGGGCTCTGCCTGGACGGGAAATCTGG ATGAGATGGGATCCGCCAAGCAAAAGCAGGATAAGAACTCATCGAAGTCT GCCAACGGAGGTTTTGCGGATCAGCTACTGGAGCTGGCCAGAAAGCAGCA GATGAACACAGCCGAAAGGAGGAATATCTTCTGCATCATCATGAGCGCCG CCGATTATGTGGACGCCTTTGAGAAGATTCTGCATTTGTCTCTGAAGGAC CAGCGAGCGGTGGCCTACGTGATCATCCATTGCGCTCTGAATGAGAAGCG TGCTAACCCCTATTACGCTCATTTGGCACTTAAGTTCTGTCAATTCAACA GAAAGTATCAACTGGCTTTCCAGTTTGCCAGTTGGGACAGAATCAATGAT ATCGAAAAGCTTTCCAAGCCGCAGATTCGCAACCTGGCTAGTTTTCTGCA GCAAGTAATCCTAGCTGCTGGTCTGCAGCTGTCAGTGCTCAAAGTAGTCG ACTTTATGCAGCTGGACAAGCTCAGCTTTTACTTTATGAAGGAAGTGATG GTCAGGCTGCTTTTGGCTAACGATGAACGCGAGATTTATCAGACGTTCGA AAGAGTTGCCAAAAACACCAAACTGCAGCAGTTTAAGCAAAGCGTAAGGC TCTTCCTGCAGCATTTTCTTTTGCAAGAGGAACAGCTGGACAAACTTAAG CTGAAGGACGAGGATCGACAGCTTCTGCAGCAGCGCGTTGATCACATAGA CAAACTTTTAGCCTATGTGGACCTGTAGTTATAAGTTGTAAATTTGTAAA ATATTCATAATGAGGATGCTATAAAACAAATAAAGGACAAGTTTTTGTAA AATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9004-RA | 2725 | CG9004-RA | 23..2725 | 1..2703 | 13515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2373167..2373857 | 1..692 | 98 | == | Plus |
chr3L | 2373988..2374108 | 823..943 | 99 | -> | Plus |
chr3L | 2374162..2375924 | 944..2703 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9004-RA | 1..2565 | 64..2628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9004-RA | 1..2565 | 64..2628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9004-RA | 1..2565 | 64..2628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9004-RA | 1..2565 | 64..2628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9004-RA | 1..2565 | 64..2628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9004-RA | 7..2709 | 1..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9004-RA | 6..2708 | 1..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9004-RA | 6..2708 | 1..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9004-RA | 7..2709 | 1..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9004-RA | 6..2708 | 1..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2373733..2374675 | 1..943 | 100 | -> | Plus |
3L | 2374729..2376488 | 944..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2373733..2374675 | 1..943 | 100 | -> | Plus |
3L | 2374729..2376488 | 944..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2373733..2374675 | 1..943 | 100 | -> | Plus |
3L | 2374729..2376488 | 944..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2373733..2374675 | 1..943 | 100 | -> | Plus |
arm_3L | 2374729..2376488 | 944..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2373733..2374675 | 1..943 | 100 | -> | Plus |
3L | 2374729..2376488 | 944..2703 | 100 | Plus |
Translation from 63 to 2627
> LD10043.hyp MAKIKKKEAKAKPLTRKEQRKQKSEFKKQNKRLYFAGKTNGTQRVAAAAE ALAAQSQLGKNKKKKRSKKPKIINPDEIPKEQLLSGEIDSDDDESIDSDF SDAEVDALLPAREKMEVYEPLGKKVKKTTGGAIQRQDEEAVRRKELRQQK ELESKSKKQRIKQLRIENEEDDREINKLEKKLKLNKSKDKNRLVRKMFND GLDYLLDFVLDDEEEKRKWEEKQERKKKLKEQQEKEEAGMWSDEEEDKED RDEPMDNFSEDDSGSEGEDDDEDLTGEEEQSEEDSEQEENAPKIKEDIYG RKRDAEGNILPDPVELEASAAGQKYIPPHQRALMAASAGSSEKQAEILAR LLKQCKGLLNRLSEANLHKIAAGIEELYMKNSRYNMNETLTKLIQEALLG YTRTNERMVQEHMVLLAYLHAQVGSEIGAHFLQTFVELFDGYVKNIATLE VEDKQLNNLVLVLCYMYLFKIYELNLLMELIGKLSDQLCEKSVECLLLIF QSIGFRLRKDDPLAFKTMMQKVQSQIASAPLELKENPRLRFMVDILNAVK NNNMQKLPQYDPELAENLRKRLKAMLKNDRYVVTLNITLEDLLRADKVGK WWIVGSAWTGNLDEMGSAKQKQDKNSSKSANGGFADQLLELARKQQMNTA ERRNIFCIIMSAADYVDAFEKILHLSLKDQRAVAYVIIHCALNEKRANPY YAHLALKFCQFNRKYQLAFQFASWDRINDIEKLSKPQIRNLASFLQQVIL AAGLQLSVLKVVDFMQLDKLSFYFMKEVMVRLLLANDEREIYQTFERVAK NTKLQQFKQSVRLFLQHFLLQEEQLDKLKLKDEDRQLLQQRVDHIDKLLA YVDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9004-PA | 854 | CG9004-PA | 1..854 | 1..854 | 4317 | 100 | Plus |
ncm-PA | 1330 | CG12750-PA | 80..833 | 5..771 | 208 | 18 | Plus |
CG2839-PA | 826 | CG2839-PA | 435..716 | 5..306 | 185 | 21.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 306..554 | 5..289 | 179 | 23 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3872..4260 | 7..356 | 179 | 20.8 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3911..4299 | 7..356 | 179 | 20.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 312..590 | 5..306 | 178 | 24 | Plus |
CG2839-PA | 826 | CG2839-PA | 444..744 | 2..295 | 178 | 22.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 493..741 | 3..297 | 178 | 22.7 | Plus |
CG2839-PA | 826 | CG2839-PA | 324..608 | 5..306 | 170 | 22.9 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3547..3900 | 7..321 | 166 | 20.8 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4002..4355 | 7..321 | 165 | 20.6 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4587..4940 | 7..321 | 164 | 21.1 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4260..4615 | 5..321 | 162 | 19.6 | Plus |
Translation from 63 to 2627
> LD10043.pep MAKIKKKEAKAKPLTRKEQRKQKSEFKKQNKRLYFAGKTNGTQRVAAAAE ALAAQSQLGKNKKKKRSKKPKIINPDEIPKEQLLSGEIDSDDDESIDSDF SDAEVDALLPAREKMEVYEPLGKKVKKTTGGAIQRQDEEAVRRKELRQQK ELESKSKKQRIKQLRIENEEDDREINKLEKKLKLNKSKDKNRLVRKMFND GLDYLLDFVLDDEEEKRKWEEKQERKKKLKEQQEKEEAGMWSDEEEDKED RDEPMDNFSEDDSGSEGEDDDEDLTGEEEQSEEDSEQEENAPKIKEDIYG RKRDAEGNILPDPVELEASAAGQKYIPPHQRALMAASAGSSEKQAEILAR LLKQCKGLLNRLSEANLHKIAAGIEELYMKNSRYNMNETLTKLIQEALLG YTRTNERMVQEHMVLLAYLHAQVGSEIGAHFLQTFVELFDGYVKNIATLE VEDKQLNNLVLVLCYMYLFKIYELNLLMELIGKLSDQLCEKSVECLLLIF QSIGFRLRKDDPLAFKTMMQKVQSQIASAPLELKENPRLRFMVDILNAVK NNNMQKLPQYDPELAENLRKRLKAMLKNDRYVVTLNITLEDLLRADKVGK WWIVGSAWTGNLDEMGSAKQKQDKNSSKSANGGFADQLLELARKQQMNTA ERRNIFCIIMSAADYVDAFEKILHLSLKDQRAVAYVIIHCALNEKRANPY YAHLALKFCQFNRKYQLAFQFASWDRINDIEKLSKPQIRNLASFLQQVIL AAGLQLSVLKVVDFMQLDKLSFYFMKEVMVRLLLANDEREIYQTFERVAK NTKLQQFKQSVRLFLQHFLLQEEQLDKLKLKDEDRQLLQQRVDHIDKLLA YVDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24916-PA | 847 | GF24916-PA | 1..847 | 1..854 | 3338 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14862-PA | 855 | GG14862-PA | 1..855 | 1..854 | 3782 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16479-PA | 846 | GH16479-PA | 13..846 | 15..854 | 3051 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9004-PA | 854 | CG9004-PA | 1..854 | 1..854 | 4317 | 100 | Plus |
ncm-PA | 1330 | CG12750-PA | 80..833 | 5..771 | 208 | 18 | Plus |
CG2839-PA | 826 | CG2839-PA | 435..716 | 5..306 | 185 | 21.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 306..554 | 5..289 | 179 | 23 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3872..4260 | 7..356 | 179 | 20.8 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3911..4299 | 7..356 | 179 | 20.8 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3872..4260 | 7..356 | 179 | 20.8 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3911..4299 | 7..356 | 179 | 20.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 312..590 | 5..306 | 178 | 24 | Plus |
CG2839-PA | 826 | CG2839-PA | 444..744 | 2..295 | 178 | 22.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 493..741 | 3..297 | 178 | 22.7 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1365..1657 | 5..310 | 174 | 21.2 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1365..1657 | 5..310 | 174 | 21.2 | Plus |
CG2839-PA | 826 | CG2839-PA | 324..608 | 5..306 | 170 | 22.9 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3547..3900 | 7..321 | 166 | 20.8 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3586..3939 | 7..321 | 166 | 20.8 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3547..3900 | 7..321 | 166 | 20.8 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3586..3939 | 7..321 | 166 | 20.8 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4002..4355 | 7..321 | 165 | 20.6 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4041..4394 | 7..321 | 165 | 20.6 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4002..4355 | 7..321 | 165 | 20.6 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4041..4394 | 7..321 | 165 | 20.6 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4587..4940 | 7..321 | 164 | 21.1 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4626..4979 | 7..321 | 164 | 21.1 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4587..4940 | 7..321 | 164 | 21.1 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4626..4979 | 7..321 | 164 | 21.1 | Plus |
Caf1-180-PB | 1183 | CG12109-PB | 355..641 | 2..287 | 164 | 22.6 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4260..4615 | 5..321 | 162 | 19.6 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4299..4654 | 5..321 | 162 | 19.6 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4260..4615 | 5..321 | 162 | 19.6 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4299..4654 | 5..321 | 162 | 19.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12150-PA | 841 | GI12150-PA | 1..841 | 1..854 | 3000 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24654-PA | 571 | GL24654-PA | 10..571 | 294..854 | 2628 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21469-PA | 852 | GA21469-PA | 1..852 | 1..854 | 3378 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14487-PA | 854 | GM14487-PA | 1..854 | 1..854 | 4346 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13684-PA | 673 | GD13684-PA | 4..670 | 79..744 | 2973 | 93.9 | Plus |
Dsim\GD13685-PA | 90 | GD13685-PA | 1..90 | 765..854 | 442 | 97.8 | Plus |
Dsim\GD13683-PA | 71 | GD13683-PA | 13..45 | 13..45 | 169 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13430-PA | 845 | GJ13430-PA | 16..845 | 14..854 | 3045 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12640-PA | 865 | GK12640-PA | 1..865 | 1..854 | 2999 | 71.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20318-PA | 854 | GE20318-PA | 13..854 | 13..854 | 3694 | 95.8 | Plus |