BDGP Sequence Production Resources |
Search the DGRC for LD10135
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 101 |
Well: | 35 |
Vector: | pBS SK- |
Associated Gene/Transcript | A16-RA |
Protein status: | LD10135.pep: gold |
Preliminary Size: | 1352 |
Sequenced Size: | 1389 |
Gene | Date | Evidence |
---|---|---|
CG9933 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9933 | 2002-06-13 | Blastp of sequenced clone |
CG9933 | 2003-01-01 | Sim4 clustering to Release 3 |
A16 | 2008-04-29 | Release 5.5 accounting |
A16 | 2008-08-15 | Release 5.9 accounting |
A16 | 2008-12-18 | 5.12 accounting |
1389 bp (1389 high quality bases) assembled on 2002-06-13
GenBank Submission: AY122156
> LD10135.complete AGAAAGCCGTTTTGTTGAAAGATTACAAATGAATTGCGATGCATTTAGCT AAAATTGAACTTTAGCAGAGCCGCAAAACGATAGAGAGCCAACGCAGAGA ACACGGAGCCACCCAAACACATGGATACCAAGTCCAATGATGACTCGGCT GGCAGTGACTCGCTGGACAAATCTATGCAAATCAAGTGTGTGATGGTGGA GACAACGACGACGGGCGACGGAGACTCCACAGTCGGAGATCTGGACAACT GCAGCAGGGATTCCGCTGCGGAATCGATTAACAAGGAATCCGGTTCGATG GAGGGAGCCGGCAAGCAGACGGATCACAAGACTGAAGCTGCGGCGGGGTC GTGCGGCGAGGGCGACAGTCCGCAGAGCAGTCAATCCCCACCAGAACATC CGGCCAGCAAATCGCCCACATCTCCATGCACTGCCTTCGAGACGAAAGTC AAGCTTATATCACAGAACCTCAAGGAAACCACGCTGGCGGAGAGCACCGG CGCCTCCGTATCAGCATCCACATCCACATCAACACCCACGTCCGCCTCTA GTAGCATCAGCGGCAGCATGCTGGAGTCGCAGCAGACACCCAGCCAGTCC ACCCCCGAAACAACAGATTCCGCCTCGTCGTCCGTGCGCGTGAAGAAGGT ACGCTTCCATCCGGACGTCAAGGAAAACGACGGCGGGAACTGGATGAAAA GAAAGCGACGCTCCATGCATACCAAACGAACCTCCTCGCCCAGCGGCGCT AACTGTGATGGCATGGAGCTGGACGGTGAGTACGAGGACAACGATGACGA TGAGCAGGAGGAGGCGGAGGAGGAGTTCGATCTGGCCAAGACAATCGCCG AGGCGGAGGATTACCTCAAGCAGCACCCGTTGACATACGTGCAGCGCGTC GAACAGAACGGCGAGCGGCTGCAGGATGGACTGCTCAGCATCGAGGATAT GCTAAACGAAGTCGGCGAGGAGGTGGTCACCGAGTACAACGACGAGGACT TCTTCAGACGCATCAAGCCCGAGAATGGCATTGAACGCATTCTGGGCAAG GAGACCAAGGCGGGAAAGGTTGAATTCCTTCTGCGCTACGAGAACCAAGG CGGACTCTTCTGGCAATCGGAGGAGTTCATCAAGCGCACGTGCCCCTCGC TGCTCAAGGCCTACGAAATGAATCGAGAACGACGTCAGCAGCGCTTGATG CATCACGTTGCCAAAAGGCAGAGTCTGCGACAGCGATACACGGATTTCTA GTAGCGGTTACTTAGGTATTAGGTTCATAATTAGGTTCCACATAATTGTA ACATTTTTGTAAAATGAAGTAAATGATTTTCTTTTGTTGAACAAAAATAA CTAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
A16-RA | 1450 | A16-RA | 93..1447 | 1..1355 | 6775 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13018909..13019978 | 1070..1 | 5275 | 99.5 | Minus |
chr2L | 23010047 | chr2L | 13018252..13018410 | 1355..1197 | 795 | 100 | Minus |
chr2L | 23010047 | chr2L | 13018478..13018608 | 1197..1067 | 655 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13020229..13021298 | 1070..1 | 5350 | 100 | Minus |
2L | 23513712 | 2L | 13019572..13019730 | 1355..1197 | 795 | 100 | Minus |
2L | 23513712 | 2L | 13019798..13019928 | 1197..1067 | 655 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13020229..13021298 | 1070..1 | 5350 | 100 | Minus |
2L | 23513712 | 2L | 13019572..13019730 | 1355..1197 | 795 | 100 | Minus |
2L | 23513712 | 2L | 13019798..13019928 | 1197..1067 | 655 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13018250..13018409 | 1198..1357 | 98 | <- | Minus |
chr2L | 13018478..13018606 | 1069..1197 | 100 | <- | Minus |
chr2L | 13018911..13019978 | 1..1068 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
A16-RA | 1..1131 | 121..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
A16-RA | 1..1131 | 121..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
A16-RA | 1..1131 | 121..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
A16-RA | 1..1131 | 121..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
A16-RA | 1..1131 | 121..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
A16-RA | 10..1364 | 1..1357 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
A16-RA | 10..1361 | 1..1352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
A16-RA | 15..1366 | 1..1352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
A16-RA | 10..1364 | 1..1357 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
A16-RA | 15..1366 | 1..1352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13019570..13019729 | 1198..1357 | 98 | <- | Minus |
2L | 13019798..13019926 | 1069..1197 | 100 | <- | Minus |
2L | 13020231..13021298 | 1..1068 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13019570..13019729 | 1198..1357 | 98 | <- | Minus |
2L | 13019798..13019926 | 1069..1197 | 100 | <- | Minus |
2L | 13020231..13021298 | 1..1068 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13019570..13019729 | 1198..1357 | 98 | <- | Minus |
2L | 13019798..13019926 | 1069..1197 | 100 | <- | Minus |
2L | 13020231..13021298 | 1..1068 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13019570..13019729 | 1198..1357 | 98 | <- | Minus |
arm_2L | 13019798..13019926 | 1069..1197 | 100 | <- | Minus |
arm_2L | 13020231..13021298 | 1..1068 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13020231..13021298 | 1..1068 | 100 | Minus | |
2L | 13019570..13019729 | 1198..1357 | 98 | <- | Minus |
2L | 13019798..13019926 | 1069..1197 | 100 | <- | Minus |
Translation from 120 to 1250
> LD10135.hyp MDTKSNDDSAGSDSLDKSMQIKCVMVETTTTGDGDSTVGDLDNCSRDSAA ESINKESGSMEGAGKQTDHKTEAAAGSCGEGDSPQSSQSPPEHPASKSPT SPCTAFETKVKLISQNLKETTLAESTGASVSASTSTSTPTSASSSISGSM LESQQTPSQSTPETTDSASSSVRVKKVRFHPDVKENDGGNWMKRKRRSMH TKRTSSPSGANCDGMELDGEYEDNDDDEQEEAEEEFDLAKTIAEAEDYLK QHPLTYVQRVEQNGERLQDGLLSIEDMLNEVGEEVVTEYNDEDFFRRIKP ENGIERILGKETKAGKVEFLLRYENQGGLFWQSEEFIKRTCPSLLKAYEM NRERRQQRLMHHVAKRQSLRQRYTDF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
A16-PA | 376 | CG9933-PA | 1..376 | 1..376 | 1938 | 100 | Plus |
Translation from 120 to 1250
> LD10135.pep MDTKSNDDSAGSDSLDKSMQIKCVMVETTTTGDGDSTVGDLDNCSRDSAA ESINKESGSMEGAGKQTDHKTEAAAGSCGEGDSPQSSQSPPEHPASKSPT SPCTAFETKVKLISQNLKETTLAESTGASVSASTSTSTPTSASSSISGSM LESQQTPSQSTPETTDSASSSVRVKKVRFHPDVKENDGGNWMKRKRRSMH TKRTSSPSGANCDGMELDGEYEDNDDDEQEEAEEEFDLAKTIAEAEDYLK QHPLTYVQRVEQNGERLQDGLLSIEDMLNEVGEEVVTEYNDEDFFRRIKP ENGIERILGKETKAGKVEFLLRYENQGGLFWQSEEFIKRTCPSLLKAYEM NRERRQQRLMHHVAKRQSLRQRYTDF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15649-PA | 367 | GF15649-PA | 3..367 | 1..376 | 933 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10231-PA | 376 | GG10231-PA | 1..376 | 1..376 | 1618 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10348-PA | 346 | GH10348-PA | 1..346 | 1..376 | 821 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
A16-PA | 376 | CG9933-PA | 1..376 | 1..376 | 1938 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21215-PA | 346 | GI21215-PA | 1..346 | 1..376 | 962 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24779-PA | 381 | GL24779-PA | 1..381 | 1..376 | 968 | 57.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22135-PA | 381 | GA22135-PA | 1..381 | 1..376 | 977 | 57.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25921-PA | 376 | GM25921-PA | 1..376 | 1..376 | 1974 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22091-PA | 100 | GD22091-PA | 1..100 | 277..376 | 502 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11047-PA | 347 | GJ11047-PA | 1..347 | 1..376 | 913 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14813-PA | 362 | GK14813-PA | 1..362 | 1..376 | 861 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11956-PA | 380 | GE11956-PA | 1..380 | 1..376 | 1684 | 92.6 | Plus |