BDGP Sequence Production Resources |
Search the DGRC for LD10220
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 102 |
Well: | 20 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG9205-RA |
Protein status: | LD10220.pep: gold |
Preliminary Size: | 1331 |
Sequenced Size: | 1136 |
Gene | Date | Evidence |
---|---|---|
CG9205 | 2001-01-01 | Release 2 assignment |
CG9205 | 2001-10-10 | Blastp of sequenced clone |
CG9205 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9205 | 2008-04-29 | Release 5.5 accounting |
CG9205 | 2008-08-15 | Release 5.9 accounting |
trio | 2008-08-15 | Release 5.9 accounting |
CG9205 | 2008-12-18 | 5.12 accounting |
trio | 2008-12-18 | 5.12 accounting |
1136 bp (1136 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061117
> LD10220.complete ATTTTTTTCACTCGCGCTGCTTTTGTTTTTCACACGCTTTCCCACCGGTA AAATCACCCAAGTTACCGTTGCACGCAGTTCGCGACTTGACGCGGGCTAA GCTAAAATTTTCATTTTTCAAGAAACCGCGATTTTACGAACGGGCGCTCT CTGTTTTGTTTAAACAAATTGGATTTTGCGAAACGACAACTTCCGTTTCT GCCGAGTTTTACCAAATAAACCCGAATCAAATTAATATACCTGCAAACAT TTTACGCAAAATCAAGAACTCGCTTCGCCAGCGCAAGAAGAAGCACCGCC CACGGCAGGCCACGCCCCCAGTGCGCCCCGATCCCAAGGACGCCGCCGCC AAAATGGAGAGCAACTTGAACAGGATCATTCGTGAATCGGCCAAACTGAA ACTCTGCGGTCAGCTCAGCAAATACACCAATGTGATGAAGGGATGGCAGT ACCGTTGGTTTACGGTGGACGCCAAGACAGGATCGCTGAGCTACTACCTG TGCGACTCGTCGACGGTGGGCGACGACATCGCGCCCTCGCCCCACGTCCT GGCCAGTGCTCCCAGGGGCCAGGTGCAGCTGGCCGGCGCAGTGGTGTACC CGAGTGACGAGGACTCTAGGACGTTCGCCATCGCCTGCGCCTCCGGCGAT ACGGTAAAGCTGAGGGCCAACGATGCCAGGGCCCGTCAGGAGTGGGTGGA TGGCCTGCGGGCGGTGGTCGAGAGTCACATGAAGGCGATGGACATCAGCA ACTCGTCGCCGCTTCCTCCGCGGGAATTGCTTGCCGCCTCCGATGCCATG GTTTCAGCGCGCCAAGCTCTGTTTCTCACGGAACAATGCAACGCTTCTCT GGCCAGGGCCATCGAGAGCATCGACTGCGCTTCCTTCTCGCCAACGGATC CCGATCTTCTTTTGCTCAAGGCGATCTCCACGGCCAGCACCCAGTGCCTG CACCAGTGCTTGGGATTACTGCAACGCCACCAGGAGATCAACCAGCCGGT GGCAGAGGCCGTGCCTCTTGTGCTTTGAGAGATGCATGCTGCAAGGATAG TCTCCAGTTTCCAGTTTCCACTAAGATATGCCCAATAAACACTAAGCCAA ACCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1035186..1035583 | 441..838 | 1915 | 98.7 | Plus |
chr3L | 24539361 | chr3L | 1035660..1035925 | 840..1105 | 1270 | 98.5 | Plus |
chr3L | 24539361 | chr3L | 1034837..1035089 | 190..442 | 1205 | 98.4 | Plus |
chr3L | 24539361 | chr3L | 1034323..1034511 | 1..189 | 915 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1035559..1035956 | 441..838 | 1990 | 100 | Plus |
3L | 28110227 | 3L | 1036031..1036300 | 838..1107 | 1350 | 100 | Plus |
3L | 28110227 | 3L | 1035210..1035462 | 190..442 | 1265 | 100 | Plus |
3L | 28110227 | 3L | 1034697..1034885 | 1..189 | 945 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1035559..1035956 | 441..838 | 1990 | 100 | Plus |
3L | 28103327 | 3L | 1036031..1036300 | 838..1107 | 1350 | 100 | Plus |
3L | 28103327 | 3L | 1035210..1035462 | 190..442 | 1265 | 100 | Plus |
3L | 28103327 | 3L | 1034697..1034885 | 1..189 | 945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1034323..1034511 | 1..189 | 98 | -> | Plus |
chr3L | 1034837..1035088 | 190..441 | 98 | -> | Plus |
chr3L | 1035187..1035583 | 442..838 | 98 | -> | Plus |
chr3L | 1035659..1035925 | 839..1105 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9205-RB | 1..675 | 354..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9205-RB | 1..675 | 354..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9205-RA | 1..675 | 354..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9205-RB | 1..675 | 354..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9205-RA | 1..675 | 354..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9205-RA | 1..1105 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9205-RA | 1..1105 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9205-RA | 1..1105 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9205-RA | 1..1105 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9205-RA | 1..1105 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1034697..1034885 | 1..189 | 100 | -> | Plus |
3L | 1035210..1035461 | 190..441 | 100 | -> | Plus |
3L | 1035560..1035956 | 442..838 | 100 | -> | Plus |
3L | 1036032..1036298 | 839..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1034697..1034885 | 1..189 | 100 | -> | Plus |
3L | 1035210..1035461 | 190..441 | 100 | -> | Plus |
3L | 1035560..1035956 | 442..838 | 100 | -> | Plus |
3L | 1036032..1036298 | 839..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1034697..1034885 | 1..189 | 100 | -> | Plus |
3L | 1035210..1035461 | 190..441 | 100 | -> | Plus |
3L | 1035560..1035956 | 442..838 | 100 | -> | Plus |
3L | 1036032..1036298 | 839..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1034697..1034885 | 1..189 | 100 | -> | Plus |
arm_3L | 1035210..1035461 | 190..441 | 100 | -> | Plus |
arm_3L | 1035560..1035956 | 442..838 | 100 | -> | Plus |
arm_3L | 1036032..1036298 | 839..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1035210..1035461 | 190..441 | 100 | -> | Plus |
3L | 1035560..1035956 | 442..838 | 100 | -> | Plus |
3L | 1036032..1036298 | 839..1105 | 100 | Plus | |
3L | 1034697..1034885 | 1..189 | 100 | -> | Plus |
Translation from 2 to 1027
> LD10220.hyp FFHSRCFCFSHAFPPVKSPKLPLHAVRDLTRAKLKFSFFKKPRFYERALS VLFKQIGFCETTTSVSAEFYQINPNQINIPANILRKIKNSLRQRKKKHRP RQATPPVRPDPKDAAAKMESNLNRIIRESAKLKLCGQLSKYTNVMKGWQY RWFTVDAKTGSLSYYLCDSSTVGDDIAPSPHVLASAPRGQVQLAGAVVYP SDEDSRTFAIACASGDTVKLRANDARARQEWVDGLRAVVESHMKAMDISN SSPLPPRELLAASDAMVSARQALFLTEQCNASLARAIESIDCASFSPTDP DLLLLKAISTASTQCLHQCLGLLQRHQEINQPVAEAVPLVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9205-PB | 224 | CG9205-PB | 1..224 | 118..341 | 1142 | 100 | Plus |
CG9205-PA | 224 | CG9205-PA | 1..224 | 118..341 | 1142 | 100 | Plus |
CG1513-PA | 784 | CG1513-PA | 26..120 | 136..242 | 156 | 34.6 | Plus |
Translation from 353 to 1027
> LD10220.pep MESNLNRIIRESAKLKLCGQLSKYTNVMKGWQYRWFTVDAKTGSLSYYLC DSSTVGDDIAPSPHVLASAPRGQVQLAGAVVYPSDEDSRTFAIACASGDT VKLRANDARARQEWVDGLRAVVESHMKAMDISNSSPLPPRELLAASDAMV SARQALFLTEQCNASLARAIESIDCASFSPTDPDLLLLKAISTASTQCLH QCLGLLQRHQEINQPVAEAVPLVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24427-PA | 224 | GF24427-PA | 1..224 | 1..224 | 1139 | 95.5 | Plus |
Dana\GF11570-PA | 748 | GF11570-PA | 20..116 | 17..125 | 161 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14753-PA | 224 | GG14753-PA | 1..224 | 1..224 | 1186 | 100 | Plus |
Dere\GG25251-PA | 778 | GG25251-PA | 24..120 | 17..125 | 164 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15820-PA | 229 | GH15820-PA | 1..221 | 1..221 | 1053 | 89.1 | Plus |
Dgri\GH19816-PA | 759 | GH19816-PA | 9..105 | 17..125 | 167 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9205-PB | 224 | CG9205-PB | 1..224 | 1..224 | 1142 | 100 | Plus |
CG9205-PA | 224 | CG9205-PA | 1..224 | 1..224 | 1142 | 100 | Plus |
CG1513-PA | 784 | CG1513-PA | 26..120 | 19..125 | 156 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12601-PA | 306 | GI12601-PA | 77..296 | 1..220 | 1051 | 89.1 | Plus |
Dmoj\GI20405-PA | 751 | GI20405-PA | 9..105 | 17..125 | 166 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16677-PA | 268 | GL16677-PA | 47..268 | 1..222 | 1087 | 91 | Plus |
Dper\GL17708-PA | 510 | GL17708-PA | 28..124 | 17..125 | 168 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21611-PA | 222 | GA21611-PA | 1..222 | 1..222 | 1082 | 91 | Plus |
Dpse\GA13517-PB | 776 | GA13517-PB | 28..124 | 17..125 | 169 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14372-PA | 224 | GM14372-PA | 1..224 | 1..224 | 1186 | 100 | Plus |
Dsec\GM20569-PA | 686 | GM20569-PA | 24..120 | 17..125 | 164 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13589-PA | 222 | GD13589-PA | 1..222 | 1..224 | 1163 | 99.1 | Plus |
Dsim\GD10040-PA | 218 | GD10040-PA | 24..120 | 17..125 | 164 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12724-PA | 229 | GJ12724-PA | 1..221 | 1..221 | 1062 | 90 | Plus |
Dvir\GJ20077-PA | 778 | GJ20077-PA | 9..105 | 17..125 | 166 | 34.9 | Plus |