BDGP Sequence Production Resources |
Search the DGRC for LD10242
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 102 |
Well: | 42 |
Vector: | pBS SK- |
Associated Gene/Transcript | isopeptidase-T-3-RA |
Protein status: | LD10242.pep: gold |
Preliminary Size: | 2562 |
Sequenced Size: | 2404 |
Gene | Date | Evidence |
---|---|---|
CG11025 | 2001-01-01 | Release 2 assignment |
CG11025 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11025 | 2003-02-27 | Blastp of sequenced clone |
isopeptidase-T-3 | 2008-04-29 | Release 5.5 accounting |
isopeptidase-T-3 | 2008-08-15 | Release 5.9 accounting |
isopeptidase-T-3 | 2008-12-18 | 5.12 accounting |
2404 bp (2404 high quality bases) assembled on 2003-02-27
GenBank Submission: BT004899
> LD10242.complete AAAAGTGCCGCAAAATGTAACAAACACCTAGCTGCAGACCCAAGATGATA CCCTGGATGCGGGAGAAGTTCAACGAGAAACGGGCCAAGTGGTTGGCGCG TAGCAAGCGCAGCGGTGGTTCTCCGGCTGACGAAAGCCCTCGGAGCAGCA GTCATAGCCACAGCCAGCGGACAGACGCCAGCGATGCGGAGAGCCTGAGC GGATCCTCGTTGAATGTCCACACGGCGGAATCTGAAACGCAGACGGATGG CGGGATATCCGCTTCCAATTCGCGGCCCCTTGTGGGCGGGGGCAGTTGCG TCCTAAGGACTCCATCGCCCGCTCGCCGACGTCGCATTCACCTTGAGCTA CAGCTGCAGCGACGAGAGGAACGTGCTGAGCATCAGAAGGTGGTGCCACA GGACTCGCCCACGCCCACTCACCAACAGCAGGCTAATGCGAAATCAGCCC ATACAAATCGCCCAGGTAGCTCTACTTCTGGCGAGGCAGACGATGCCAGC AGGCCAGGTGAATCTATCCTGGTGCGGGTAATCTGCCCCAGCTCTCGGGT TCTTATCTTCAAAACGGACGTTAATAAGCGCCTAAACGAGCTGAAGAGTG AGGTGATTCTGGAACTGAGCGACGATCCCGACTCCATCCAGCTATTTGCC CCAGATGTGCGGCATCTTAATCCGCGATACCGTCTCTATCGGGCGGAATA CTTCGGCGGCGAGCTTAACGAGGGCGACACGCTGGCCCAGCTAAAAGTTC GCAACAATGAGACTTTCATACTCTCCCCACGACGCAATACTCTGCCGCAG ACTGTTTCACGGATACGTGAGGTTCCTGGCCCAAATGAGCAGCTGGTGGA GAGCGCCACCCGATACGTGCCCGTCAATTGCAACCAGCTGCCCACCATCG ATATTAATGAAATCTTTCAGCAGTCGAATATCCAATACGATGTGCGAAAG GTGTTGATCTCTTTGGCTCAAGCTTCTGCGGCGGTTATAGGAGCTGGCCC TTATGCTCCACGCCTGATAGCTATGCTAAAGCAACGTTTGATCAATCGCC GAAATCAGCAAGCGGATACGCTGCAATGCCTCGTGGACATGGGCTTCAAG CGGGAGCTAGCCGCATTTGCCTTAAAAGCACACAATGGCATTTACTCGAC CACGATGGAGTGGCTAATACAGAACCAAAACGAGGAAAATCCACAGGAAC CGCCGGGCATGAATATGCAGCACAGTCTATCTTCCATCTCACCCTCCACG ATTGTCACCAATAATGAAACCATTGAAAACACTGCTGCCTTGATTGAGAT TGTACGAATCTACAGCCACCGGGATTCCCCTCCCAGCGATGAGATTGTGG AATCGCTTACAGAAATGGGCTTCGAGGAGACGGCAGTGCTCGCGGCACTG AAGAAAACTGGCAACAACAAGGCGTCCGCGTGCGAATGGTTGTGCGACAA TCGATCGGGTAGCGTTATTGAACTGCGTGAAGGCTTGGCGCCCGATTCGC CCATCCTAAAGGTGATCCTGGAAATGCCACAAGTCCAGATGACCCTAAGC AATCCAAAGACTTTTTTGGCATTTCTGGGCATCCTGGAAAACGAACATGC GATACGCGTGTGGCGTGGCGACAACGACACAACCTCGGTCATCACACATA TCCTTCAAAAGTACCATGAGGAGAAGCATGTGCTTGGCATCAATCAGTTC TATACGAACCGCTGGTGAAAGATGCCGCTAAGTGGCTTTACTATGAGATT AACCAAATTATATTTATACATATACATACACAATCACACACCCGAAGTGC ATGGCTGTAGCTTGGTCCATTTTGGGGCTCTAATTATACATTGTGTATGT GCCCGTATGTAAAGAGTATTTTTGTAGCCAAAAACCATGAAAGTAAACTG CACAAAGCCAAAAGATGCAATCGCTTCGCCAAGAGCACGCGGCTGCACTC TACAAACGCTTACCGATCAGTACGAATTGCATTTTATACATACATATACA TATATATACATACATACACATATATATACATACATACATATATATATATA TATATATATATATATAAATATAAAATGTATCTATATCTAGTCAGGCCTTC ATCCTACAATTGTATTAGGTTAAACAATAATTACTCTATTCATCTAGTTT GCTAGCTCATCTTCAGCCGAATCTCGCACTACATTTAGAAAATGTCACAT ACTGCATCCCACAGAAACAACCCATCAGTTTATAAGCGCTCGTACGTGTG GTGATTTAAGTGCGTTGTAATCCCAGGTTGTTTAAACCATCAACTTGAAC TCAAAGTATTATTTTGTAAACCAAATATTCAAATTTGCATAGTTTTAACA AAATGCAAATAAATCAATTAGTTTTTGATACAAAACAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
isopeptidase-T-3-RA | 2560 | isopeptidase-T-3-RA | 170..2559 | 1..2390 | 11950 | 100 | Plus |
isopeptidase-T-3.b | 2660 | isopeptidase-T-3.b | 714..2660 | 440..2386 | 9735 | 100 | Plus |
isopeptidase-T-3.a | 2490 | isopeptidase-T-3.a | 544..2490 | 440..2386 | 9735 | 100 | Plus |
isopeptidase-T-3.b | 2660 | isopeptidase-T-3.b | 129..568 | 1..440 | 2200 | 100 | Plus |
isopeptidase-T-3.a | 2490 | isopeptidase-T-3.a | 93..531 | 1..439 | 2195 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 15559905..15560722 | 1569..2386 | 4060 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 15558606..15559095 | 440..929 | 2420 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 15557955..15558394 | 1..440 | 2185 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 15559151..15559487 | 930..1266 | 1685 | 100 | Plus |
chr2R | 21145070 | chr2R | 15559539..15559842 | 1266..1569 | 1475 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 19672660..19673481 | 1569..2390 | 4110 | 100 | Plus |
2R | 25286936 | 2R | 19671361..19671850 | 440..929 | 2450 | 100 | Plus |
2R | 25286936 | 2R | 19670711..19671150 | 1..440 | 2200 | 100 | Plus |
2R | 25286936 | 2R | 19671906..19672242 | 930..1266 | 1685 | 100 | Plus |
2R | 25286936 | 2R | 19672294..19672597 | 1266..1569 | 1520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 19673859..19674680 | 1569..2390 | 4110 | 100 | Plus |
2R | 25260384 | 2R | 19672560..19673049 | 440..929 | 2450 | 100 | Plus |
2R | 25260384 | 2R | 19671910..19672349 | 1..440 | 2200 | 100 | Plus |
2R | 25260384 | 2R | 19673105..19673441 | 930..1266 | 1685 | 100 | Plus |
2R | 25260384 | 2R | 19673493..19673796 | 1266..1569 | 1520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Circe | 7450 | Circe CIRC 7450bp | 4186..4256 | 1773..1843 | 121 | 63.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 15557955..15558393 | 1..439 | 99 | -> | Plus |
chr2R | 15558606..15559095 | 440..929 | 99 | -> | Plus |
chr2R | 15559151..15559486 | 930..1265 | 100 | -> | Plus |
chr2R | 15559539..15559842 | 1266..1569 | 99 | -> | Plus |
chr2R | 15559906..15560320 | 1570..1984 | 100 | == | Plus |
chr2R | 15560409..15560722 | 2073..2386 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isopeptidase-T-3-RA | 1..1674 | 45..1718 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isopeptidase-T-3-RA | 1..1674 | 45..1718 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isopeptidase-T-3-RA | 1..1674 | 45..1718 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isopeptidase-T-3-RA | 1..1674 | 45..1718 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isopeptidase-T-3-RA | 1..1674 | 45..1718 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isopeptidase-T-3-RA | 93..2478 | 1..2386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isopeptidase-T-3-RA | 93..2478 | 1..2386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isopeptidase-T-3-RA | 94..2479 | 1..2386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isopeptidase-T-3-RA | 93..2478 | 1..2386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isopeptidase-T-3-RA | 94..2479 | 1..2386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19670711..19671149 | 1..439 | 100 | -> | Plus |
2R | 19671361..19671850 | 440..929 | 100 | -> | Plus |
2R | 19671906..19672241 | 930..1265 | 100 | -> | Plus |
2R | 19672294..19672597 | 1266..1569 | 100 | -> | Plus |
2R | 19672661..19673477 | 1570..2386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19670711..19671149 | 1..439 | 100 | -> | Plus |
2R | 19671361..19671850 | 440..929 | 100 | -> | Plus |
2R | 19671906..19672241 | 930..1265 | 100 | -> | Plus |
2R | 19672294..19672597 | 1266..1569 | 100 | -> | Plus |
2R | 19672661..19673477 | 1570..2386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19670711..19671149 | 1..439 | 100 | -> | Plus |
2R | 19671361..19671850 | 440..929 | 100 | -> | Plus |
2R | 19671906..19672241 | 930..1265 | 100 | -> | Plus |
2R | 19672294..19672597 | 1266..1569 | 100 | -> | Plus |
2R | 19672661..19673477 | 1570..2386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 15558216..15558654 | 1..439 | 100 | -> | Plus |
arm_2R | 15558866..15559355 | 440..929 | 100 | -> | Plus |
arm_2R | 15559411..15559746 | 930..1265 | 100 | -> | Plus |
arm_2R | 15559799..15560102 | 1266..1569 | 100 | -> | Plus |
arm_2R | 15560166..15560982 | 1570..2386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19671910..19672348 | 1..439 | 100 | -> | Plus |
2R | 19672560..19673049 | 440..929 | 100 | -> | Plus |
2R | 19673105..19673440 | 930..1265 | 100 | -> | Plus |
2R | 19673493..19673796 | 1266..1569 | 100 | -> | Plus |
2R | 19673860..19674676 | 1570..2386 | 100 | Plus |
Translation from 44 to 1717
> LD10242.pep MIPWMREKFNEKRAKWLARSKRSGGSPADESPRSSSHSHSQRTDASDAES LSGSSLNVHTAESETQTDGGISASNSRPLVGGGSCVLRTPSPARRRRIHL ELQLQRREERAEHQKVVPQDSPTPTHQQQANAKSAHTNRPGSSTSGEADD ASRPGESILVRVICPSSRVLIFKTDVNKRLNELKSEVILELSDDPDSIQL FAPDVRHLNPRYRLYRAEYFGGELNEGDTLAQLKVRNNETFILSPRRNTL PQTVSRIREVPGPNEQLVESATRYVPVNCNQLPTIDINEIFQQSNIQYDV RKVLISLAQASAAVIGAGPYAPRLIAMLKQRLINRRNQQADTLQCLVDMG FKRELAAFALKAHNGIYSTTMEWLIQNQNEENPQEPPGMNMQHSLSSISP STIVTNNETIENTAALIEIVRIYSHRDSPPSDEIVESLTEMGFEETAVLA ALKKTGNNKASACEWLCDNRSGSVIELREGLAPDSPILKVILEMPQVQMT LSNPKTFLAFLGILENEHAIRVWRGDNDTTSVITHILQKYHEEKHVLGIN QFYTNRW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11731-PA | 556 | GF11731-PA | 1..556 | 1..557 | 2549 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21992-PA | 557 | GG21992-PA | 1..557 | 1..557 | 2835 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23012-PA | 586 | GH23012-PA | 1..586 | 1..557 | 1930 | 66.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
isopeptidase-T-3-PA | 557 | CG11025-PA | 1..557 | 1..557 | 2863 | 100 | Plus |
isopeptidase-T-3-PC | 561 | CG11025-PC | 1..561 | 1..557 | 2848 | 99.3 | Plus |
isopeptidase-T-3-PB | 435 | CG11025-PB | 11..435 | 133..557 | 2181 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21079-PA | 359 | GI21079-PA | 1..356 | 1..360 | 1137 | 65.2 | Plus |
Dmoj\GI21080-PA | 167 | GI21080-PA | 1..167 | 391..557 | 821 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10356-PA | 493 | GL10356-PA | 1..493 | 1..557 | 1503 | 60.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24943-PA | 554 | GA24943-PA | 1..554 | 1..557 | 2244 | 78 | Plus |
Dpse\GA24943-PB | 436 | GA24943-PB | 11..436 | 133..557 | 1959 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21979-PA | 557 | GM21979-PA | 1..557 | 1..557 | 2974 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11475-PA | 561 | GD11475-PA | 1..561 | 1..557 | 2948 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20925-PA | 572 | GJ20925-PA | 1..572 | 1..557 | 2069 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15885-PA | 572 | GK15885-PA | 1..572 | 1..557 | 2216 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12072-PA | 557 | GE12072-PA | 1..557 | 1..557 | 2867 | 96.6 | Plus |
Translation from 44 to 1717
> LD10242.hyp MIPWMREKFNEKRAKWLARSKRSGGSPADESPRSSSHSHSQRTDASDAES LSGSSLNVHTAESETQTDGGISASNSRPLVGGGSCVLRTPSPARRRRIHL ELQLQRREERAEHQKVVPQDSPTPTHQQQANAKSAHTNRPGSSTSGEADD ASRPGESILVRVICPSSRVLIFKTDVNKRLNELKSEVILELSDDPDSIQL FAPDVRHLNPRYRLYRAEYFGGELNEGDTLAQLKVRNNETFILSPRRNTL PQTVSRIREVPGPNEQLVESATRYVPVNCNQLPTIDINEIFQQSNIQYDV RKVLISLAQASAAVIGAGPYAPRLIAMLKQRLINRRNQQADTLQCLVDMG FKRELAAFALKAHNGIYSTTMEWLIQNQNEENPQEPPGMNMQHSLSSISP STIVTNNETIENTAALIEIVRIYSHRDSPPSDEIVESLTEMGFEETAVLA ALKKTGNNKASACEWLCDNRSGSVIELREGLAPDSPILKVILEMPQVQMT LSNPKTFLAFLGILENEHAIRVWRGDNDTTSVITHILQKYHEEKHVLGIN QFYTNRW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
isopeptidase-T-3-PA | 557 | CG11025-PA | 1..557 | 1..557 | 2863 | 100 | Plus |
isopeptidase-T-3-PC | 561 | CG11025-PC | 1..561 | 1..557 | 2848 | 99.3 | Plus |
isopeptidase-T-3-PB | 435 | CG11025-PB | 11..435 | 133..557 | 2181 | 100 | Plus |