BDGP Sequence Production Resources |
Search the DGRC for LD10274
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 102 |
Well: | 74 |
Vector: | pBS SK- |
Associated Gene/Transcript | thoc7-RA |
Protein status: | LD10274.pep: validated full length |
Preliminary Size: | 1055 |
Sequenced Size: | 876 |
Gene | Date | Evidence |
---|---|---|
CG17143 | 2001-01-01 | Release 2 assignment |
CG17143 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17143 | 2003-02-27 | Blastp of sequenced clone |
thoc7 | 2008-04-29 | Release 5.5 accounting |
thoc7 | 2008-08-15 | Release 5.9 accounting |
thoc7 | 2008-12-18 | 5.12 accounting |
876 bp (876 high quality bases) assembled on 2003-02-27
GenBank Submission: BT010075
> LD10274.complete AAGAAATCATAAAGCAGCGCCTGCTGATTGACGGGGATGGAACTGGAGAG GATCGGAGAATAGTAGTGTTGCTGAAACAGTTCTTGAAGTGGGCCAGTGA CTCGCTGGACAGCAATCCCATCATGTACGACCGACTGATGGCCCAATTCG CCCAGTGCAAGCTCACTGCGTTAAAGAATGTACAAACTCTGCAGATGATC GCCGGTGAGCGTGACAACTACACACAACTAGTTGAACACCACGAAGAAAG TATTGTTTTGGCTAAAGCGGAAATCGAATCCAGTAAAAAAGAGCTAATCA CTGCCAAGCAGATTCGCAAGAACAAGATGGAGTACGACCTGCTGGCCTCG CTCATCCAGGACCAACCGGACCGCAGTGAAACACAGCGACATATTGAGAC CATTAGGAGGGAGATTGACGACTTGGTGCAAAAGAAGCTAAAGATGGAGC GCAAGTTTCAGAAACGACGCAATGACTTCACTTTGCTGATGTACACGATT CACGAGCTGGAACAGCAGCTGGACCAGGACAGCTCATCCTCGGCATCCTC CTCGTCCAGCGATTGCGATGCCCGCTCTGAGCCGGACCTAGACGACAATG GGATCATGGAGGTAAGCGATGAAGACGACGATCTCAACAATAGCACTCCC ACAAAGTTCGACGGAGCCCGCGGCGAGCCCAAATATCACTCAGTCTCTAC TGAGGACTCTAAAGCCATGTCCGTAGAAGAGGACACGGTGCTTGAGCTAA GCATCGACAAAGATGAGCACGACGTGGATGTAGCTGTTGCCAATTAGGTT AGAAGCGCTAGCATGTACAATAAAAACAAAAAAATAAAATGTCATGAACT ATAATATACAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 211591..212334 | 116..859 | 100 | <- | Minus |
chr3L | 212400..212514 | 1..115 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc7-RA | 71..867 | 1..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc7-RA | 71..867 | 1..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc7-RA | 71..867 | 1..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc7-RA | 71..867 | 1..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc7-RA | 71..867 | 1..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc7-RA | 71..929 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc7-RA | 71..929 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc7-RA | 71..929 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc7-RA | 71..929 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc7-RA | 71..929 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 211636..212379 | 116..859 | 100 | <- | Minus |
3L | 212445..212559 | 1..115 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 211636..212379 | 116..859 | 100 | <- | Minus |
3L | 212445..212559 | 1..115 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 211636..212379 | 116..859 | 100 | <- | Minus |
3L | 212445..212559 | 1..115 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 211636..212379 | 116..859 | 100 | <- | Minus |
arm_3L | 212445..212559 | 1..115 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 211636..212379 | 116..859 | 100 | <- | Minus |
3L | 212445..212559 | 1..115 | 100 | Minus |
Translation from 2 to 796
> LD10274.hyp EIIKQRLLIDGDGTGEDRRIVVLLKQFLKWASDSLDSNPIMYDRLMAQFA QCKLTALKNVQTLQMIAGERDNYTQLVEHHEESIVLAKAEIESSKKELIT AKQIRKNKMEYDLLASLIQDQPDRSETQRHIETIRREIDDLVQKKLKMER KFQKRRNDFTLLMYTIHELEQQLDQDSSSSASSSSSDCDARSEPDLDDNG IMEVSDEDDDLNNSTPTKFDGARGEPKYHSVSTEDSKAMSVEEDTVLELS IDKDEHDVDVAVAN*
Translation from 122 to 796
> LD10274.pep MYDRLMAQFAQCKLTALKNVQTLQMIAGERDNYTQLVEHHEESIVLAKAE IESSKKELITAKQIRKNKMEYDLLASLIQDQPDRSETQRHIETIRREIDD LVQKKLKMERKFQKRRNDFTLLMYTIHELEQQLDQDSSSSASSSSSDCDA RSEPDLDDNGIMEVSDEDDDLNNSTPTKFDGARGEPKYHSVSTEDSKAMS VEEDTVLELSIDKDEHDVDVAVAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10568-PA | 272 | GF10568-PA | 48..271 | 1..223 | 936 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14678-PA | 288 | GG14678-PA | 64..288 | 1..224 | 1073 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15660-PA | 279 | GH15660-PA | 48..278 | 1..223 | 652 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
thoc7-PB | 287 | CG17143-PB | 64..287 | 1..224 | 1127 | 100 | Plus |
thoc7-PA | 288 | CG17143-PA | 65..288 | 1..224 | 1127 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12705-PA | 273 | GI12705-PA | 48..272 | 1..223 | 681 | 68.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16104-PA | 274 | GL16104-PA | 48..273 | 1..223 | 897 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14344-PA | 274 | GA14344-PA | 48..273 | 1..223 | 897 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14294-PA | 289 | GM14294-PA | 65..289 | 1..224 | 1145 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13532-PA | 289 | GD13532-PA | 65..289 | 1..224 | 1145 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12688-PA | 276 | GJ12688-PA | 48..275 | 1..223 | 699 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16853-PA | 277 | GK16853-PA | 48..276 | 1..223 | 659 | 61.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21039-PA | 289 | GE21039-PA | 65..289 | 1..224 | 1075 | 95.1 | Plus |