BDGP Sequence Production Resources |
Search the DGRC for LD10327
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 103 |
Well: | 27 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG4825-RA |
Protein status: | LD10327.pep: gold |
Preliminary Size: | 2108 |
Sequenced Size: | 2074 |
Gene | Date | Evidence |
---|---|---|
CG4825 | 2001-01-01 | Release 2 assignment |
CG4825 | 2001-11-09 | Blastp of sequenced clone |
CG4825 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4825 | 2008-04-29 | Release 5.5 accounting |
CG4825 | 2008-08-15 | Release 5.9 accounting |
CG4825 | 2008-12-18 | 5.12 accounting |
2074 bp (2074 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069402
> LD10327.complete CACCACCGCCGGCAAGTGTCGATTTTTATTGGTCCAAGCCGCGCGCAGCA TGTTAATTGACAACAACGGACGGTAGCTGGCAAATGATAAAATAAACGTG CGCCGATCGAACGCGAGTCGAGGATCCAGGAGCCGTGCCCACGCCATAGC AATCGAGGTCACTCGAGCCGGGAGCCATAGAAACCGCTGCGAGGAGAGCC GAGTGGCAAGTCTTGGTGGAATCGAATCGAATGTTGCGCAACCTTCAGTC CCCGCATGTACTTAGCCACCAAACCGATTCCGAGCCACCAACCACCTAAC AACAACCACATCACGCCACCCGCCTACATTTGATAATCGAATTTGTAGTT AGGCGATGAAGAAGCGCACTAATTCACGTGGCACCCCGACCTCGTCGGGC GACGCGCTACTGGACACCTCCTTCTCCTCCGCCGGCGATGCTGAGCGGGA TCATCCCGCCTACAAATCAGGCGCGGCCAGTGCCCCTGCCACGCCCACCA AGCGACGGGATGGCAGCGATGGCAGTGTCAGCAGCGCGGGAGCACGCAGG AAGCGCAAGGACGAGATCGCCCAGACATTTGTGATCGTCAACGAACGTCC CGTGGACGACATATCGCTGGACTTCTTCTACAAGCCACACACCATCACCT TGCTGGCTGTTTCGGTGCTCGCCGTCATGTACTTTGCGTTCGTCAGAAAC GAGGCGAACGTGGATGAGAATCTCTGGGCCGGCCTCCTCTGCATTGTGTT CTTCTTTCTGATCGTCTCGGTGATTGCATTTCCCAATGGACCCTTCACAC GACCCCATCCCGCCGTCTGGCGGATATTATTCGGATGCTCTGTGCTGTAC CTGCTGACGCTACAATTCCTGATGTTCCAAAACTACCCGACTATCAGGAG CATATTCTACTGGATTGATCCAAAGTTGAAGAACTTCCATATCGATATGG AAAAGGAGTATGGCGTCAATTGTTCGGACATCAGTTGGGATCGCGTTAAA GGCCACTTGGACGTCTTTGCCTGGGGTCACTTCTTGGGCTGGGCCTTTAA GGCCATCCTCATTCGTCACATGGGCATTCTGTGGGCCATTTCTGTGATGT GGGAGATTACCGAAATAACCTTTGCGCACCTGCTGCCCAACTTCATCGAG TGCTGGTGGGATGCCCTCATCCTGGATGTGATCATCTGCAACGGTCTCGG CATTTGGATGGGTCTGAAGATCTGCCAGATTCTGGAGATGCGCGAGTACA AGTGGGCCAGTATTAAGGACATATCCACCACAACGGGTAAAATCAAGCGT GCCATGCTGCAATTTACGCCCGAGAGCTGGTCGGCCATTCGCTGGCTGGA TCCCAAGTCCACGGCGATGAGATTTGCCGCCGTCATTCAGCTTGTGATCT TCTGGCAGGTCACCGAGCTGAACACATTCTTCTTGAAGCACATCTTTGAG ATGCCACCGGATCACTTCATTGTGATAGGTCGTCTCATTTTCATCGGTCT GTTTGTGGCGCCTTCGGTTAGGCAATATTACGTATATGTCACCGACACAC GCTGCAAGAGAGTCGGCACCCAGTGTTGGGTTTACGGCGCCATCATGGTC TCCGAAGCTATTCTGTGCATCAAGAATGGCAAGGAGTTGTTTGAGCGCAC GCAAGCCATCAACATTGTCCTGTGGCTGACTGTCCAAGTAATAATCTCGG TGGCATTTGTCTACCTCGCGGTTTACTGGCAGCAGCGACAGCTGAAAAAG GTTTCATCGACGCCCGCAAAAACAAAAGAAACTATTCCTGCCAGCTCATC ATCGCCCTCGAAAGGTAAATTGTCGCCGCAAAAAGAGAAGAAACTAAAAT AAGAAGTTGATATAAATAAACTTTAAAGCTGCAGAAACAAAGTGGATCGG GCCATTCTTTAAATTAAAAACCAAAACAGAGAAGAGAATTATGTACATAA ACTAAAGAAAACTGTACTGATTAAATTAAATACATAACATGTAAATATAT ATATATATATGTATAAAAGATATATATATATATATATATATATTTATTAA AAAGACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20514476..20515171 | 696..1 | 3480 | 100 | Minus |
chr3L | 24539361 | chr3L | 20512619..20513187 | 1522..954 | 2845 | 100 | Minus |
chr3L | 24539361 | chr3L | 20513244..20513506 | 956..694 | 1315 | 100 | Minus |
chr3L | 24539361 | chr3L | 20511430..20511673 | 2056..1813 | 1220 | 100 | Minus |
chr3L | 24539361 | chr3L | 20512342..20512556 | 1732..1518 | 1075 | 100 | Minus |
chr3L | 24539361 | chr3L | 20512190..20512277 | 1817..1730 | 440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20525486..20526181 | 696..1 | 3480 | 100 | Minus |
3L | 28110227 | 3L | 20523629..20524197 | 1522..954 | 2845 | 100 | Minus |
3L | 28110227 | 3L | 20524254..20524516 | 956..694 | 1315 | 100 | Minus |
3L | 28110227 | 3L | 20522436..20522683 | 2060..1813 | 1240 | 100 | Minus |
3L | 28110227 | 3L | 20523352..20523566 | 1732..1518 | 1075 | 100 | Minus |
3L | 28110227 | 3L | 20523200..20523287 | 1817..1730 | 440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20518586..20519281 | 696..1 | 3480 | 100 | Minus |
3L | 28103327 | 3L | 20516729..20517297 | 1522..954 | 2845 | 100 | Minus |
3L | 28103327 | 3L | 20517354..20517616 | 956..694 | 1315 | 100 | Minus |
3L | 28103327 | 3L | 20515536..20515783 | 2060..1813 | 1240 | 100 | Minus |
3L | 28103327 | 3L | 20516452..20516666 | 1732..1518 | 1075 | 100 | Minus |
3L | 28103327 | 3L | 20516300..20516387 | 1817..1730 | 440 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20511496..20511671 | 1815..1990 | 100 | <- | Minus |
chr3L | 20512193..20512274 | 1733..1814 | 100 | <- | Minus |
chr3L | 20512342..20512552 | 1522..1732 | 100 | <- | Minus |
chr3L | 20512620..20513185 | 956..1521 | 100 | <- | Minus |
chr3L | 20513245..20513503 | 697..955 | 100 | <- | Minus |
chr3L | 20514476..20515171 | 1..696 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4825-RA | 1..1497 | 356..1852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4825-RA | 1..1497 | 356..1852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4825-RA | 1..1497 | 356..1852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4825-RA | 1..1497 | 356..1852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4825-RA | 1..1497 | 356..1852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4825-RA | 1..2056 | 1..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4825-RA | 14..2069 | 1..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4825-RB | 1..2046 | 8..2056 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4825-RA | 1..2056 | 1..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4825-RB | 1..2046 | 8..2056 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20522440..20522681 | 1815..2056 | 100 | <- | Minus |
3L | 20523203..20523284 | 1733..1814 | 100 | <- | Minus |
3L | 20523352..20523562 | 1522..1732 | 100 | <- | Minus |
3L | 20523630..20524195 | 956..1521 | 100 | <- | Minus |
3L | 20524255..20524513 | 697..955 | 100 | <- | Minus |
3L | 20525486..20526181 | 1..696 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20522440..20522681 | 1815..2056 | 100 | <- | Minus |
3L | 20523203..20523284 | 1733..1814 | 100 | <- | Minus |
3L | 20523352..20523562 | 1522..1732 | 100 | <- | Minus |
3L | 20523630..20524195 | 956..1521 | 100 | <- | Minus |
3L | 20524255..20524513 | 697..955 | 100 | <- | Minus |
3L | 20525486..20526181 | 1..696 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20522440..20522681 | 1815..2056 | 100 | <- | Minus |
3L | 20523203..20523284 | 1733..1814 | 100 | <- | Minus |
3L | 20523352..20523562 | 1522..1732 | 100 | <- | Minus |
3L | 20523630..20524195 | 956..1521 | 100 | <- | Minus |
3L | 20524255..20524513 | 697..955 | 100 | <- | Minus |
3L | 20525486..20526181 | 1..696 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20516303..20516384 | 1733..1814 | 100 | <- | Minus |
arm_3L | 20515540..20515781 | 1815..2056 | 100 | <- | Minus |
arm_3L | 20516452..20516662 | 1522..1732 | 100 | <- | Minus |
arm_3L | 20516730..20517295 | 956..1521 | 100 | <- | Minus |
arm_3L | 20517355..20517613 | 697..955 | 100 | <- | Minus |
arm_3L | 20518586..20519281 | 1..696 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20515540..20515781 | 1815..2056 | 100 | <- | Minus |
3L | 20516303..20516384 | 1733..1814 | 100 | <- | Minus |
3L | 20516452..20516662 | 1522..1732 | 100 | <- | Minus |
3L | 20516730..20517295 | 956..1521 | 100 | <- | Minus |
3L | 20517355..20517613 | 697..955 | 100 | <- | Minus |
3L | 20518586..20519281 | 1..696 | 100 | Minus |
Translation from 355 to 1851
> LD10327.pep MKKRTNSRGTPTSSGDALLDTSFSSAGDAERDHPAYKSGAASAPATPTKR RDGSDGSVSSAGARRKRKDEIAQTFVIVNERPVDDISLDFFYKPHTITLL AVSVLAVMYFAFVRNEANVDENLWAGLLCIVFFFLIVSVIAFPNGPFTRP HPAVWRILFGCSVLYLLTLQFLMFQNYPTIRSIFYWIDPKLKNFHIDMEK EYGVNCSDISWDRVKGHLDVFAWGHFLGWAFKAILIRHMGILWAISVMWE ITEITFAHLLPNFIECWWDALILDVIICNGLGIWMGLKICQILEMREYKW ASIKDISTTTGKIKRAMLQFTPESWSAIRWLDPKSTAMRFAAVIQLVIFW QVTELNTFFLKHIFEMPPDHFIVIGRLIFIGLFVAPSVRQYYVYVTDTRC KRVGTQCWVYGAIMVSEAILCIKNGKELFERTQAINIVLWLTVQVIISVA FVYLAVYWQQRQLKKVSSTPAKTKETIPASSSSPSKGKLSPQKEKKLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24124-PA | 489 | GF24124-PA | 1..489 | 1..498 | 2469 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13301-PA | 498 | GG13301-PA | 1..498 | 1..498 | 2593 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17010-PA | 487 | GH17010-PA | 1..487 | 1..498 | 2188 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4825-PA | 498 | CG4825-PA | 1..498 | 1..498 | 2630 | 100 | Plus |
CG4825-PB | 497 | CG4825-PB | 1..497 | 1..498 | 2613 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11904-PA | 492 | GI11904-PA | 1..492 | 1..498 | 2239 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12769-PA | 487 | GL12769-PA | 1..460 | 1..475 | 2244 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18460-PA | 374 | GA18460-PA | 1..374 | 1..389 | 1839 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22203-PA | 498 | GM22203-PA | 1..498 | 1..498 | 2616 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12178-PA | 347 | GD12178-PA | 1..285 | 1..285 | 1495 | 96.5 | Plus |
Dsim\GD12178-PA | 347 | GD12178-PA | 286..347 | 437..498 | 289 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13778-PA | 487 | GJ13778-PA | 1..487 | 1..498 | 2317 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10791-PA | 500 | GK10791-PA | 1..499 | 1..495 | 2223 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22393-PA | 498 | GE22393-PA | 1..498 | 1..498 | 2605 | 97.8 | Plus |
Translation from 355 to 1851
> LD10327.hyp MKKRTNSRGTPTSSGDALLDTSFSSAGDAERDHPAYKSGAASAPATPTKR RDGSDGSVSSAGARRKRKDEIAQTFVIVNERPVDDISLDFFYKPHTITLL AVSVLAVMYFAFVRNEANVDENLWAGLLCIVFFFLIVSVIAFPNGPFTRP HPAVWRILFGCSVLYLLTLQFLMFQNYPTIRSIFYWIDPKLKNFHIDMEK EYGVNCSDISWDRVKGHLDVFAWGHFLGWAFKAILIRHMGILWAISVMWE ITEITFAHLLPNFIECWWDALILDVIICNGLGIWMGLKICQILEMREYKW ASIKDISTTTGKIKRAMLQFTPESWSAIRWLDPKSTAMRFAAVIQLVIFW QVTELNTFFLKHIFEMPPDHFIVIGRLIFIGLFVAPSVRQYYVYVTDTRC KRVGTQCWVYGAIMVSEAILCIKNGKELFERTQAINIVLWLTVQVIISVA FVYLAVYWQQRQLKKVSSTPAKTKETIPASSSSPSKGKLSPQKEKKLK*