BDGP Sequence Production Resources |
Search the DGRC for LD10431
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 104 |
Well: | 31 |
Vector: | pBS SK- |
Associated Gene/Transcript | Baldspot-RA |
Protein status: | LD10431.pep: gold |
Preliminary Size: | 1503 |
Sequenced Size: | 1390 |
Gene | Date | Evidence |
---|---|---|
CG3971 | 2001-10-10 | Blastp of sequenced clone |
Baldspot | 2008-04-29 | Release 5.5 accounting |
Baldspot | 2008-08-15 | Release 5.9 accounting |
Baldspot | 2008-12-18 | 5.12 accounting |
1390 bp (1390 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061121
> LD10431.complete CGAACCGCCAGCTAAACGTTCAGTTCGCTTTGCGCCGGCAAATTCGATAG TTTTTTGAGTTTGCTGAACCGAGTCGCTGGGGCAGAAGTGTGTGACAGCC AGCCGTGTGTGTTGTGATCCAGCCAATTGATACTGCGATAAGAGGCGGCG AGCAAATCTGCATATAACCCAAGTAACATAGCCACCAACTCAAACACATA AAGCCCACCAAAATGATCAACATGGACATTAGCGTTACGCCCAATTACTC GTACATCTTCGACTTCGAGAACGATTTCATACACCAGCGGACGCGCAAAT GGATGCTAGAGAACTGGACATGGGTGTTCTACTACTGCGGCATCTACATG CTGGTCATCTTCGGTGGTCAGCACTTTATGCAAAATCGGCCTAGATTCCA ATTGCGCGGCCCGCTGATCATATGGAACACCTTGCTGGCCATGTTCAGCA TCATGGGTGCTGCCCGAACGGCGCCGGAGCTGATTCACGTGCTGCGTCAC TACGGACTCTTCCACTCCGTCTGCGTGCCCAGCTACATCGAGCAAGATCG CGTGTGCGGCTTCTGGACCTGGCTCTTCGTGCTCAGCAAACTGCCGGAGC TGGGCGACACGATATTCATTGTGCTCCGCAAGCAGCCACTCATCTTTTTG CACTGGTATCACCACATCACCGTGCTGATCTACTCGTGGTTCAGCTATAC GGAATATACCAGCTCTGCCCGCTGGTTCATCGTGATGAACTACTGCGTGC ACTCGGTGATGTACAGCTACTATGCTCTGAAGGCGGCCCGCTTCAATCCG CCCAGGTTCATCTCGATGATCATCACGTCGCTGCAGCTGGCTCAGATGAT CATCGGATGTGCGATCAACGTGTGGGCCAATGGCTTCCTGAAGACGCACG GCACCTCCTCCTGTCACATCTCGCAGCGCAACATCAATCTGTCGATCGCC ATGTACTCCAGCTACTTTGTCCTGTTCGCGCGCTTCTTCTACAAGGCGTA CCTGGCGCCCGGTGGTCACAAGAGCCGGCGCATGGCCGCCTCCCTGGCAG CCCAGAATGTGGTCAAGCAGTCGAGCAGCCCCCAGCAGGCCAGCGAGAGC TCCAAGTTCATCGGCGCTGGCGAGGATCAGGCAGCCTATCTGCGCAAGGC CAAGGCGCAGTAAAACGGAGCTCGGCACACCAGCACCTAACTCCCATCAT CACCACTCCCCCTGTTTACGGCTAAGGACCTTTATTTATGTAGCGGTGTA CAAGTTGTTTTTTAATTTTAAACCTGGGTGGCACACGACCGGTCGGATGA GAGTTTAATTTTGTAAGCCAAAAGTTGTACCGTGTGGACAGGCGTACGAA CCATATATCTGAACATGTATATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Baldspot-RA | 2460 | Baldspot-RA | 43..1429 | 1..1387 | 6905 | 99.8 | Plus |
Baldspot.h | 2852 | Baldspot.h | 220..1450 | 157..1387 | 6125 | 99.8 | Plus |
Baldspot-RB | 2520 | Baldspot-RB | 259..1489 | 157..1387 | 6125 | 99.8 | Plus |
Baldspot.h | 2852 | Baldspot.h | 4..160 | 1..157 | 785 | 100 | Plus |
Baldspot-RB | 2520 | Baldspot-RB | 43..199 | 1..157 | 785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16639583..16640304 | 1372..651 | 3535 | 99.3 | Minus |
chr3L | 24539361 | chr3L | 16648954..16649190 | 394..158 | 1185 | 100 | Minus |
chr3L | 24539361 | chr3L | 16651217..16651373 | 157..1 | 785 | 100 | Minus |
chr3L | 24539361 | chr3L | 16641115..16641254 | 532..393 | 700 | 100 | Minus |
chr3L | 24539361 | chr3L | 16640847..16640975 | 658..530 | 645 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16649851..16650587 | 1387..651 | 3640 | 99.6 | Minus |
3L | 28110227 | 3L | 16659230..16659466 | 394..158 | 1185 | 100 | Minus |
3L | 28110227 | 3L | 16661471..16661627 | 157..1 | 785 | 100 | Minus |
3L | 28110227 | 3L | 16651398..16651537 | 532..393 | 700 | 100 | Minus |
3L | 28110227 | 3L | 16651130..16651258 | 658..530 | 645 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16642951..16643687 | 1387..651 | 3640 | 99.5 | Minus |
3L | 28103327 | 3L | 16652330..16652566 | 394..158 | 1185 | 100 | Minus |
3L | 28103327 | 3L | 16654571..16654727 | 157..1 | 785 | 100 | Minus |
3L | 28103327 | 3L | 16644498..16644637 | 532..393 | 700 | 100 | Minus |
3L | 28103327 | 3L | 16644230..16644358 | 658..530 | 645 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16651217..16651373 | 1..157 | 100 | Minus | |
chr3L | 16639583..16640299 | 656..1372 | 99 | <- | Minus |
chr3L | 16640850..16640972 | 533..655 | 100 | <- | Minus |
chr3L | 16641115..16641252 | 395..532 | 100 | <- | Minus |
chr3L | 16648954..16649190 | 158..394 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Baldspot-RB | 1..951 | 213..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Baldspot-RB | 1..951 | 213..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Baldspot-RA | 1..951 | 213..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Baldspot-RB | 1..951 | 213..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Baldspot-RA | 1..951 | 213..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Baldspot-RA | 1..1372 | 1..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Baldspot-RA | 1..1372 | 1..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Baldspot-RA | 1..1360 | 13..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Baldspot-RA | 1..1372 | 1..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Baldspot-RA | 1..1360 | 13..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16649866..16650582 | 656..1372 | 100 | <- | Minus |
3L | 16651133..16651255 | 533..655 | 100 | <- | Minus |
3L | 16651398..16651535 | 395..532 | 100 | <- | Minus |
3L | 16659230..16659466 | 158..394 | 100 | <- | Minus |
3L | 16661471..16661627 | 1..157 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16649866..16650582 | 656..1372 | 100 | <- | Minus |
3L | 16651133..16651255 | 533..655 | 100 | <- | Minus |
3L | 16651398..16651535 | 395..532 | 100 | <- | Minus |
3L | 16659230..16659466 | 158..394 | 100 | <- | Minus |
3L | 16661471..16661627 | 1..157 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16649866..16650582 | 656..1372 | 100 | <- | Minus |
3L | 16651133..16651255 | 533..655 | 100 | <- | Minus |
3L | 16651398..16651535 | 395..532 | 100 | <- | Minus |
3L | 16659230..16659466 | 158..394 | 100 | <- | Minus |
3L | 16661471..16661627 | 1..157 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16642966..16643682 | 656..1372 | 100 | <- | Minus |
arm_3L | 16644233..16644355 | 533..655 | 100 | <- | Minus |
arm_3L | 16644498..16644635 | 395..532 | 100 | <- | Minus |
arm_3L | 16652330..16652566 | 158..394 | 100 | <- | Minus |
arm_3L | 16654571..16654727 | 1..157 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16652330..16652566 | 158..394 | 100 | <- | Minus |
3L | 16654571..16654727 | 1..157 | 100 | Minus | |
3L | 16642966..16643682 | 656..1372 | 100 | <- | Minus |
3L | 16644233..16644355 | 533..655 | 100 | <- | Minus |
3L | 16644498..16644635 | 395..532 | 100 | <- | Minus |
Translation from 212 to 1162
> LD10431.pep MINMDISVTPNYSYIFDFENDFIHQRTRKWMLENWTWVFYYCGIYMLVIF GGQHFMQNRPRFQLRGPLIIWNTLLAMFSIMGAARTAPELIHVLRHYGLF HSVCVPSYIEQDRVCGFWTWLFVLSKLPELGDTIFIVLRKQPLIFLHWYH HITVLIYSWFSYTEYTSSARWFIVMNYCVHSVMYSYYALKAARFNPPRFI SMIITSLQLAQMIIGCAINVWANGFLKTHGTSSCHISQRNINLSIAMYSS YFVLFARFFYKAYLAPGGHKSRRMAASLAAQNVVKQSSSPQQASESSKFI GAGEDQAAYLRKAKAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10511-PA | 319 | GF10511-PA | 1..319 | 1..316 | 1606 | 94.7 | Plus |
Dana\GF13758-PA | 261 | GF13758-PA | 31..259 | 45..272 | 169 | 26.6 | Plus |
Dana\GF15498-PA | 253 | GF15498-PA | 20..252 | 39..273 | 168 | 27.3 | Plus |
Dana\GF15499-PA | 244 | GF15499-PA | 14..242 | 43..273 | 164 | 26.3 | Plus |
Dana\GF18859-PA | 332 | GF18859-PA | 49..332 | 19..303 | 161 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15860-PA | 316 | GG15860-PA | 1..316 | 1..316 | 1696 | 99.7 | Plus |
Dere\GG13940-PA | 268 | GG13940-PA | 10..258 | 9..263 | 170 | 28.3 | Plus |
Dere\GG20949-PA | 262 | GG20949-PA | 35..255 | 45..264 | 169 | 27.8 | Plus |
Dere\GG17214-PA | 265 | GG17214-PA | 32..265 | 43..277 | 158 | 24.1 | Plus |
Dere\GG12507-PA | 277 | GG12507-PA | 26..219 | 26..214 | 157 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16451-PA | 314 | GH16451-PA | 1..314 | 1..316 | 1550 | 92.1 | Plus |
Dgri\GH16129-PA | 268 | GH16129-PA | 52..263 | 55..270 | 194 | 30.5 | Plus |
Dgri\GH18330-PA | 323 | GH18330-PA | 50..290 | 52..301 | 168 | 25.4 | Plus |
Dgri\GH18331-PA | 339 | GH18331-PA | 51..304 | 19..273 | 164 | 27.1 | Plus |
Dgri\GH17398-PA | 285 | GH17398-PA | 1..219 | 4..214 | 156 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Baldspot-PB | 316 | CG3971-PB | 1..316 | 1..316 | 1696 | 100 | Plus |
Baldspot-PA | 316 | CG3971-PA | 1..316 | 1..316 | 1696 | 100 | Plus |
bond-PC | 322 | CG6921-PC | 50..309 | 52..310 | 204 | 25.5 | Plus |
bond-PA | 322 | CG6921-PA | 50..309 | 52..310 | 204 | 25.5 | Plus |
bond-PB | 322 | CG6921-PB | 50..309 | 52..310 | 204 | 25.5 | Plus |
Elo68beta-PB | 269 | CG11801-PB | 11..259 | 9..263 | 201 | 27.9 | Plus |
CG33110-PA | 337 | CG33110-PA | 33..336 | 8..315 | 188 | 25.6 | Plus |
CG5326-PA | 277 | CG5326-PA | 26..219 | 26..214 | 182 | 28 | Plus |
CG31141-PA | 253 | CG31141-PA | 31..248 | 45..266 | 178 | 26.6 | Plus |
sit-PA | 295 | CG5278-PA | 18..256 | 21..263 | 168 | 26.4 | Plus |
CG8534-PA | 265 | CG8534-PA | 33..255 | 44..267 | 164 | 26.7 | Plus |
CG18609-PA | 263 | CG18609-PA | 22..253 | 35..266 | 154 | 24.7 | Plus |
CG17821-PA | 262 | CG17821-PA | 35..255 | 45..264 | 153 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16709-PA | 318 | GI16709-PA | 1..318 | 1..316 | 1564 | 91.8 | Plus |
Dmoj\GI10223-PA | 260 | GI10223-PA | 31..258 | 45..273 | 181 | 26.8 | Plus |
Dmoj\GI12398-PA | 258 | GI12398-PA | 51..254 | 56..263 | 180 | 31.9 | Plus |
Dmoj\GI20345-PA | 249 | GI20345-PA | 29..249 | 52..272 | 175 | 27 | Plus |
Dmoj\GI23311-PA | 350 | GI23311-PA | 49..292 | 19..263 | 165 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12717-PA | 334 | GL12717-PA | 1..334 | 1..316 | 1516 | 84.9 | Plus |
Dper\GL24915-PA | 271 | GL24915-PA | 16..262 | 13..263 | 169 | 28.4 | Plus |
Dper\GL23223-PA | 262 | GL23223-PA | 29..261 | 43..275 | 157 | 28.3 | Plus |
Dper\GL13810-PA | 337 | GL13810-PA | 49..320 | 19..297 | 156 | 26.2 | Plus |
Dper\GL23222-PA | 264 | GL23222-PA | 33..261 | 46..273 | 154 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17812-PA | 312 | GA17812-PA | 1..312 | 1..316 | 1546 | 90.8 | Plus |
Dpse\GA23552-PA | 271 | GA23552-PA | 16..262 | 13..263 | 169 | 28.4 | Plus |
Dpse\GA21802-PA | 264 | GA21802-PA | 33..261 | 46..273 | 157 | 26.1 | Plus |
Dpse\GA26807-PA | 337 | GA26807-PA | 49..320 | 19..297 | 156 | 26.2 | Plus |
Dpse\GA18806-PA | 277 | GA18806-PA | 26..219 | 26..214 | 149 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24378-PA | 316 | GM24378-PA | 1..316 | 1..316 | 1693 | 99.4 | Plus |
Dsec\GM23846-PA | 258 | GM23846-PA | 15..256 | 33..275 | 166 | 27.4 | Plus |
Dsec\GM24776-PA | 268 | GM24776-PA | 11..259 | 9..263 | 161 | 27.9 | Plus |
Dsec\GM23845-PA | 265 | GM23845-PA | 31..265 | 42..277 | 157 | 26.2 | Plus |
Dsec\GM23639-PA | 277 | GM23639-PA | 26..219 | 26..214 | 155 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12451-PA | 267 | GD12451-PA | 13..267 | 62..316 | 1353 | 99.6 | Plus |
Dsim\GD18654-PA | 263 | GD18654-PA | 15..258 | 33..275 | 163 | 26.3 | Plus |
Dsim\GD18449-PA | 277 | GD18449-PA | 26..219 | 26..214 | 155 | 27.8 | Plus |
Dsim\GD18652-PA | 265 | GD18652-PA | 31..265 | 42..277 | 153 | 26.2 | Plus |
Dsim\GD21043-PA | 253 | GD21043-PA | 34..253 | 47..271 | 150 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12451-PA | 319 | GJ12451-PA | 1..319 | 1..316 | 1567 | 91.5 | Plus |
Dvir\GJ24166-PA | 327 | GJ24166-PA | 50..289 | 52..289 | 176 | 25.9 | Plus |
Dvir\GJ12287-PA | 261 | GJ12287-PA | 49..253 | 55..263 | 169 | 31.1 | Plus |
Dvir\GJ11026-PA | 263 | GJ11026-PA | 31..256 | 45..270 | 158 | 26.6 | Plus |
Dvir\GJ24167-PA | 343 | GJ24167-PA | 49..292 | 19..263 | 157 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25673-PA | 316 | GK25673-PA | 1..316 | 1..316 | 1582 | 93.1 | Plus |
Dwil\GK20708-PA | 255 | GK20708-PA | 28..250 | 42..264 | 171 | 29.4 | Plus |
Dwil\GK12818-PA | 327 | GK12818-PA | 47..319 | 19..296 | 166 | 26.9 | Plus |
Dwil\GK12817-PA | 322 | GK12817-PA | 50..279 | 52..294 | 164 | 25.2 | Plus |
Dwil\GK12306-PA | 226 | GK12306-PA | 19..216 | 21..214 | 161 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22199-PA | 316 | GE22199-PA | 1..316 | 1..316 | 1696 | 99.7 | Plus |
Dyak\GE20239-PA | 268 | GE20239-PA | 10..263 | 9..268 | 184 | 29.1 | Plus |
Dyak\GE10400-PA | 253 | GE10400-PA | 30..253 | 44..271 | 157 | 26.8 | Plus |
Dyak\GE24724-PA | 262 | GE24724-PA | 22..258 | 35..272 | 156 | 27.9 | Plus |
Dyak\GE13887-PA | 262 | GE13887-PA | 35..255 | 45..264 | 155 | 27.4 | Plus |
Translation from 212 to 1162
> LD10431.hyp MINMDISVTPNYSYIFDFENDFIHQRTRKWMLENWTWVFYYCGIYMLVIF GGQHFMQNRPRFQLRGPLIIWNTLLAMFSIMGAARTAPELIHVLRHYGLF HSVCVPSYIEQDRVCGFWTWLFVLSKLPELGDTIFIVLRKQPLIFLHWYH HITVLIYSWFSYTEYTSSARWFIVMNYCVHSVMYSYYALKAARFNPPRFI SMIITSLQLAQMIIGCAINVWANGFLKTHGTSSCHISQRNINLSIAMYSS YFVLFARFFYKAYLAPGGHKSRRMAASLAAQNVVKQSSSPQQASESSKFI GAGEDQAAYLRKAKAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Baldspot-PB | 316 | CG3971-PB | 1..316 | 1..316 | 1696 | 100 | Plus |
Baldspot-PA | 316 | CG3971-PA | 1..316 | 1..316 | 1696 | 100 | Plus |
bond-PC | 322 | CG6921-PC | 50..309 | 52..310 | 204 | 25.5 | Plus |
bond-PA | 322 | CG6921-PA | 50..309 | 52..310 | 204 | 25.5 | Plus |
bond-PB | 322 | CG6921-PB | 50..309 | 52..310 | 204 | 25.5 | Plus |