BDGP Sequence Production Resources |
Search the DGRC for LD10453
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 104 |
Well: | 53 |
Vector: | pBS SK- |
Associated Gene/Transcript | Lnk-RA |
Protein status: | LD10453.pep: gold |
Preliminary Size: | 2833 |
Sequenced Size: | 2934 |
Gene | Date | Evidence |
---|---|---|
CG17367 | 2001-01-01 | Release 2 assignment |
CG17367 | 2001-11-29 | Blastp of sequenced clone |
CG17367 | 2003-01-01 | Sim4 clustering to Release 3 |
Lnk | 2008-04-29 | Release 5.5 accounting |
Lnk | 2008-08-15 | Release 5.9 accounting |
Lnk | 2008-12-18 | 5.12 accounting |
2934 bp (2934 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069404
> LD10453.complete TCGATTTTCGTCCGGCTCTAATTTTCACGGTCGAGGTTTTTTCGTTTTAA ATCGCAAAAAACACAAACAAATCAGTGATAAATAATATTGCAACCAGACG GTAGCTCAAGCGGAACTGGCAACCAATGATTACGAATTAACAACAAACAA GTCGCTTTTGAAACGGACTCCAGCTGGGTAACTCGTGTGGCAAACTGAAC CGGAACCGGCAGAGGCAGCGGCAGCAGGAGCAGGAGGAGGACCTGGACCA GCGGAACTGGCAACCACCTGGCCAAATGGGTGGCAATAGCACAGGAGCGA ATACGAGCGCCTTCAGCGCTGGCGGTTACATTGGGCCCACGTCGGCCAGC AGTCATCACAGCCTGGGAACTTCATCGGCGGCAGCGGCAGCAGCAGCAGG AAGTGACCTGATACCCGCACCAATTGGCACGGGCAACGCCATGGGAGTGT CTTCGTATGCATACGGTGGAACCAGTTGGGAGGAGTTCTGCGAACGACAC GCCAGAGTGGCTGCCTCGGATTTCGCCAAGGCGTGCATCACGTACATTAA TGGCAATCTGCCGCCGGAGGAGGCGAGGAACATCCAGCATCGCAGCTTTG CTCAGAAATTTGTGGAATCCTTTTCGGCGCACTACGACACGGAGTTCTTC AAGCGGAGGAGCACTCTTAAATCAGGTGCGGGCTCGCTGGACTTCGAGGA GGAGCACGAGGTGCCAAAACTGCTCTCAAAGTCTCTATTAAGACGACTAT CATTCAAAGGACTGCGCAAGGGCAAGGCCTTCTTCCACAAGAACTCGGAT GACTTGGATGGCAGCGGTGGCAGCGGCAAGCAGAGCAAGACGAAGCTGGC CAAGATCGTTGTGGAGTGCCGGAAGGAGGGCACAGTGAACAACCTGACGC CGGAAAGTCTGGATCAACCGACGGGCTCCCAAAAGTGGGAGAAGTGTCGA CTTGTACTGGTCAAGGCCGTGGGTGGCTACATGCTAGAGTTTTACACGCC GCACAAGGCGACTAAGCCGCGCAGTGGAGTCTTTTGTTTCCTCATCTCGG AGGCTCGCGAAACAACGGCACTTGAGATGCCGGACAGGCTGAACACATTC GTCCTCAAGGCAGACAACAACATGGAGTATGTGATTGAGGCGGAGAGCGC GGAGGAGATGCGGAGTTGGCTAGCCACAATACGGTACTGCATGCGAACGC CACCCACTCAGCAGCCAACGATCGAGTCGGATGGTGTTATGGCGTCCGCC ATGCAAACATCGCCGACACTTCCGAGTCCCAATCCCATTGGTGGGATTCA GAATCCGCAGTACCAGCAGCAGCGCGGCTCGAATGGCAATCTGGTGGGAG GTGGAGCTCCGCTCACCTCATCGCTGTCTGCAGACAGTGCTTTGGGCCAG GGAGGAGCCACTTCTGCCAGCGAACTAAATGTCATCAACGAATTGGGCAC CTCACCGACCTCCGGGCCACCTGACATACCTGTAAGACCCCATCGAGGTG AACAGCGCCTGTCCGCCTCAAGCAACTTCGATGGCATCGAGGGCACGGAA AATGATGCAGATGTGGCGGATCTGACGGCTGAGATGAGCGTGTTTCCCTG GTTCCACGGCACACTGACGCGATCAGAAGCTGCCAGAATGGTACTCCATT CGGATGCAGCCGGACATGGATACTTTTTGGTGCGACAGAGCGAAACGCGC CGCGGCGAGTTCGTTCTGACCTTTAACTTCCAAGGACGAGCCAAGCATTT GCGGCTCACCATTTCGGAGAAGGGTCAGTGTCGGGTGCAGCACCTGTGGT TTCCCTCGATCCAGGAAATGCTCGAACACTTCCGCCACAACCCGATACCA CTGGAATCGGGCGGCACTTCGGATGTGACTCTTACCGAATGGGTGCACTC ACACAGCAGACTGAATGACCCGACGACGGCAGCAAATCATGACTCAGGAC AACTCAACGATCTTTCGACAAATGGGAATGGCAATGGGAACGGCAATGGC TACGATAATGGTCAGGGTTCATCGACGGCATCGAATGCGGCGGGAGGAAC TGCATCGGGAGCTGCTGGCGGTGGCCATCCGTCGCCGAGACATTGCAACG AAGTGATTACCATGAATTTGAGTGTTCGCCTAAAGACAAATGAAATCGAA CTGCCACAGGAGCCAACACACGTCTATTTTCCGGAGCAAGTCTATTTCCA TTTGGATCCCACAACGCTAACAGTGCACGGATCACCGCCACCGGCCCAGA ATTTCCTGGACCAGCCACATCTGCGGGCTTCGAACGCCTCCCTTCAGGCA GCTGCCCACCATCAGGCGGGTTCCTCCGGCAACCGGCATCCCAGCGATGG CGGCAGCAACAGCGGCGGAGCAGGAGGCGGATCGGGATCCAGTGGAGGAG CCGAGTGCACCGGACGGGCCGTCGATAATCAGTACAGCTTCACCTAAGTC CGCGCGATCGATCATCAACTGCATTTCGCGGCTTAACCAGCGGAACTTTA CTTTTGTGCCATTTTAATCATTGTCCTAAAGGAGAGGAAAATTGTGTTTT TTTTCGCATCAATGTGCGTTCTTTGCTTTCTTGATTCACTTGTTTCTATT TTAGTTAGTACCTCTTTTGGAAGACATGAAGTAACTGAACATTATTATGT ATACATTATATAGCTAAATGTGTGTGTTCATTTTAAGTACATCAATGTTG TATGTATAGAAAAGAAGAACCTAAAAAAAAAAAAACGCAAAAGAAAATTG TACGATTTTTGTGGGCACCAAAGGTGCGACTCATGCGAATCCTAAAACTT CCTGCTTTACAAAACAAAAATACATACATATATACCATACTTATAAATAT AAATTATATATACATAAATATATATTGAAATTGGTAAACTACAATAAATG AAGTTATGTAAAAGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lnk-RB | 2994 | Lnk-RB | 73..2990 | 1..2918 | 14590 | 100 | Plus |
Lnk.b | 3222 | Lnk.b | 420..2360 | 153..2093 | 9705 | 100 | Plus |
Lnk.a | 3167 | Lnk.a | 987..2305 | 775..2093 | 6595 | 100 | Plus |
Lnk.a | 3167 | Lnk.a | 2338..3163 | 2093..2918 | 4130 | 100 | Plus |
Lnk.b | 3222 | Lnk.b | 2393..3218 | 2093..2918 | 4130 | 100 | Plus |
Lnk.a | 3167 | Lnk.a | 350..973 | 153..776 | 3120 | 100 | Plus |
Lnk.a | 3167 | Lnk.a | 3..154 | 1..152 | 760 | 100 | Plus |
Lnk.b | 3222 | Lnk.b | 73..224 | 1..152 | 760 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21713681..21714999 | 775..2093 | 6535 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 21715410..21716232 | 2090..2915 | 3975 | 99 | Plus |
chr3R | 27901430 | chr3R | 21712620..21713244 | 153..777 | 3065 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 21711511..21711662 | 1..152 | 745 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25890716..25892034 | 775..2093 | 6595 | 100 | Plus |
3R | 32079331 | 3R | 25892445..25893273 | 2090..2918 | 4130 | 99.9 | Plus |
3R | 32079331 | 3R | 25889655..25890279 | 153..777 | 3125 | 100 | Plus |
3R | 32079331 | 3R | 25888545..25888696 | 1..152 | 760 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25631547..25632865 | 775..2093 | 6595 | 100 | Plus |
3R | 31820162 | 3R | 25633276..25634104 | 2090..2918 | 4130 | 99.8 | Plus |
3R | 31820162 | 3R | 25630486..25631110 | 153..777 | 3125 | 100 | Plus |
3R | 31820162 | 3R | 25629376..25629527 | 1..152 | 760 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 615..766 | 2688..2542 | 162 | 61.9 | Minus |
TART-A | 13424 | TART-A 13424bp | 368..475 | 2295..2407 | 138 | 64.3 | Plus |
TART-A | 13424 | TART-A 13424bp | 11546..11653 | 2295..2407 | 138 | 64.3 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 131..202 | 337..405 | 118 | 66.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9161..9232 | 337..405 | 118 | 66.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21711511..21711662 | 1..152 | 99 | -> | Plus |
chr3R | 21712620..21713243 | 153..776 | 99 | -> | Plus |
chr3R | 21713683..21714999 | 777..2093 | 99 | -> | Plus |
chr3R | 21715414..21716136 | 2094..2819 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lnk-RA | 1..2172 | 276..2447 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lnk-RA | 1..2172 | 276..2447 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lnk-RC | 1..2172 | 276..2447 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lnk-RA | 1..2172 | 276..2447 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lnk-RC | 1..2172 | 276..2447 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lnk-RB | 1..2912 | 4..2915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lnk-RB | 1..2912 | 4..2915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lnk-RB | 4..2918 | 1..2915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lnk-RB | 1..2912 | 4..2915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lnk-RB | 4..2918 | 1..2915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25888545..25888696 | 1..152 | 100 | -> | Plus |
3R | 25889655..25890278 | 153..776 | 100 | -> | Plus |
3R | 25890718..25892034 | 777..2093 | 100 | -> | Plus |
3R | 25892449..25893270 | 2094..2915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25888545..25888696 | 1..152 | 100 | -> | Plus |
3R | 25889655..25890278 | 153..776 | 100 | -> | Plus |
3R | 25890718..25892034 | 777..2093 | 100 | -> | Plus |
3R | 25892449..25893270 | 2094..2915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25888545..25888696 | 1..152 | 100 | -> | Plus |
3R | 25889655..25890278 | 153..776 | 100 | -> | Plus |
3R | 25890718..25892034 | 777..2093 | 100 | -> | Plus |
3R | 25892449..25893270 | 2094..2915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21714267..21714418 | 1..152 | 100 | -> | Plus |
arm_3R | 21715377..21716000 | 153..776 | 100 | -> | Plus |
arm_3R | 21716440..21717756 | 777..2093 | 100 | -> | Plus |
arm_3R | 21718171..21718992 | 2094..2915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25630486..25631109 | 153..776 | 100 | -> | Plus |
3R | 25631549..25632865 | 777..2093 | 100 | -> | Plus |
3R | 25633280..25634101 | 2094..2915 | 100 | Plus | |
3R | 25629376..25629527 | 1..152 | 100 | -> | Plus |
Translation from 275 to 2446
> LD10453.pep MGGNSTGANTSAFSAGGYIGPTSASSHHSLGTSSAAAAAAAGSDLIPAPI GTGNAMGVSSYAYGGTSWEEFCERHARVAASDFAKACITYINGNLPPEEA RNIQHRSFAQKFVESFSAHYDTEFFKRRSTLKSGAGSLDFEEEHEVPKLL SKSLLRRLSFKGLRKGKAFFHKNSDDLDGSGGSGKQSKTKLAKIVVECRK EGTVNNLTPESLDQPTGSQKWEKCRLVLVKAVGGYMLEFYTPHKATKPRS GVFCFLISEARETTALEMPDRLNTFVLKADNNMEYVIEAESAEEMRSWLA TIRYCMRTPPTQQPTIESDGVMASAMQTSPTLPSPNPIGGIQNPQYQQQR GSNGNLVGGGAPLTSSLSADSALGQGGATSASELNVINELGTSPTSGPPD IPVRPHRGEQRLSASSNFDGIEGTENDADVADLTAEMSVFPWFHGTLTRS EAARMVLHSDAAGHGYFLVRQSETRRGEFVLTFNFQGRAKHLRLTISEKG QCRVQHLWFPSIQEMLEHFRHNPIPLESGGTSDVTLTEWVHSHSRLNDPT TAANHDSGQLNDLSTNGNGNGNGNGYDNGQGSSTASNAAGGTASGAAGGG HPSPRHCNEVITMNLSVRLKTNEIELPQEPTHVYFPEQVYFHLDPTTLTV HGSPPPAQNFLDQPHLRASNASLQAAAHHQAGSSGNRHPSDGGSNSGGAG GGSGSSGGAECTGRAVDNQYSFT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16779-PA | 719 | GF16779-PA | 1..719 | 1..723 | 3008 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11431-PA | 727 | GG11431-PA | 1..727 | 1..723 | 3744 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22307-PA | 744 | GH22307-PA | 17..744 | 17..723 | 2445 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lnk-PA | 723 | CG17367-PA | 1..723 | 1..723 | 3807 | 100 | Plus |
Lnk-PB | 723 | CG17367-PB | 1..723 | 1..723 | 3807 | 100 | Plus |
Lnk-PC | 723 | CG17367-PC | 1..723 | 1..723 | 3807 | 100 | Plus |
Lnk-PD | 728 | CG17367-PD | 1..728 | 1..723 | 3791 | 99.3 | Plus |
Lnk-PF | 608 | CG17367-PF | 1..606 | 1..606 | 3178 | 100 | Plus |
Lnk-PE | 613 | CG17367-PE | 1..611 | 1..606 | 3162 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22976-PA | 723 | GI22976-PA | 1..723 | 1..723 | 2466 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21796-PA | 722 | GL21796-PA | 18..722 | 17..723 | 2651 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14482-PA | 718 | GA14482-PA | 18..718 | 17..723 | 2645 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10272-PA | 724 | GM10272-PA | 1..724 | 1..723 | 3819 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21241-PA | 723 | GD21241-PA | 1..723 | 1..723 | 3832 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22738-PA | 765 | GJ22738-PA | 41..765 | 1..723 | 2479 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12864-PA | 769 | GK12864-PA | 1..769 | 1..723 | 2605 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23626-PA | 731 | GE23626-PA | 1..731 | 1..723 | 3760 | 97.1 | Plus |
Translation from 275 to 2446
> LD10453.hyp MGGNSTGANTSAFSAGGYIGPTSASSHHSLGTSSAAAAAAAGSDLIPAPI GTGNAMGVSSYAYGGTSWEEFCERHARVAASDFAKACITYINGNLPPEEA RNIQHRSFAQKFVESFSAHYDTEFFKRRSTLKSGAGSLDFEEEHEVPKLL SKSLLRRLSFKGLRKGKAFFHKNSDDLDGSGGSGKQSKTKLAKIVVECRK EGTVNNLTPESLDQPTGSQKWEKCRLVLVKAVGGYMLEFYTPHKATKPRS GVFCFLISEARETTALEMPDRLNTFVLKADNNMEYVIEAESAEEMRSWLA TIRYCMRTPPTQQPTIESDGVMASAMQTSPTLPSPNPIGGIQNPQYQQQR GSNGNLVGGGAPLTSSLSADSALGQGGATSASELNVINELGTSPTSGPPD IPVRPHRGEQRLSASSNFDGIEGTENDADVADLTAEMSVFPWFHGTLTRS EAARMVLHSDAAGHGYFLVRQSETRRGEFVLTFNFQGRAKHLRLTISEKG QCRVQHLWFPSIQEMLEHFRHNPIPLESGGTSDVTLTEWVHSHSRLNDPT TAANHDSGQLNDLSTNGNGNGNGNGYDNGQGSSTASNAAGGTASGAAGGG HPSPRHCNEVITMNLSVRLKTNEIELPQEPTHVYFPEQVYFHLDPTTLTV HGSPPPAQNFLDQPHLRASNASLQAAAHHQAGSSGNRHPSDGGSNSGGAG GGSGSSGGAECTGRAVDNQYSFT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lnk-PA | 723 | CG17367-PA | 1..723 | 1..723 | 3807 | 100 | Plus |
Lnk-PB | 723 | CG17367-PB | 1..723 | 1..723 | 3807 | 100 | Plus |
Lnk-PC | 723 | CG17367-PC | 1..723 | 1..723 | 3807 | 100 | Plus |
Lnk-PD | 728 | CG17367-PD | 1..728 | 1..723 | 3791 | 99.3 | Plus |
Lnk-PF | 608 | CG17367-PF | 1..606 | 1..606 | 3178 | 100 | Plus |