BDGP Sequence Production Resources |
Search the DGRC for LD10456
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 104 |
Well: | 56 |
Vector: | pBS SK- |
Associated Gene/Transcript | Tif-IA-RA |
Protein status: | LD10456.pep: gold |
Preliminary Size: | 2265 |
Sequenced Size: | 2112 |
Gene | Date | Evidence |
---|---|---|
CG3278 | 2001-01-01 | Release 2 assignment |
CG16938 | 2001-01-01 | Release 2 assignment |
CG3278 | 2001-10-10 | Blastp of sequenced clone |
CG3278 | 2003-01-01 | Sim4 clustering to Release 3 |
Tif-IA | 2008-04-29 | Release 5.5 accounting |
Tif-IA | 2008-08-15 | Release 5.9 accounting |
Tif-IA | 2008-12-18 | 5.12 accounting |
2112 bp (2112 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061123
> LD10456.complete AAACAACGTGCATATTTCCAAGTAAAATTCTTACGATTTGTGCTTTAAAA ATAAAAATGAAATTCTCTTTCAAAAATAATTTATTATCTAGAACTTATTT GTATGCATTTTACGTCAGTGTGGATTATCCTTTCGAACATTAAGTTCAAA CAGAAATAAAGCTATTATTAATTTAATATGTCCTTCTACACGAGTAAGAC GGATGTGACTTCCATTTTAAAGACGTTTTCTGGCGTAAAACGAAATCAGG CAAATGCCGTGGCCATCAACAAAGTTCGATTTTCCACACCCAAAGAGAAG GGGCTCGCAGAATCAGTGCGCGTTGCCCTAGAAGAACGAAATTTCCATCT GGTCAAGGAGTTCACATACTTCCTCCGGGAAGCAGAACTCAGCGATGATG AGGTTGTAATAATCATAAAAGATGCTAAACGAATTGTTCATAATTTGACT CCAGAATTTGTAACCGTTGTCGAGGCGTTACTGTCCCTTAACTGGAAGAA AAGAAGTTCAGAGATAATCGAAGCTTATACTGAATTTTGTATCGAACTAA TGGTGACCCATAATAGATATTTACCGATTGGAGTCTCTAAACTAATTGTC CACTGGATTCCTGGAGATATGGATGAATCCGATTGGGTCCACGGATGCCC TTCGGAGCACGTGCGAAATGAGTTGAAACCCATCCATAAAGTACTGGATC GCATCTTAACTGCCGTGCCAATGGCTTTCGATATTATCATAGATGCCATA TCCGCCAAATTCCCCTATTTCAAAAAGCCGTACCATGTGACGGCAGGGTA TCTGTATAACGTGCTTTGGTTATTAGAATACAAGCCTATTTTCGAAGAAC TTGTTTTTCAACTAGTTTTACAAAAGCTTTTATTATTAGATGTTAATGCT CCAAAAGATGAAATTGAATTAGAAATGAATGATGAGGAGGAAAAGGTGGA AGCGGACACCTTGTTTGAAATCGACGATGTATGCGCCGAAAATGTACCCA AATCTGAAAAATCTGTGAGTCATCCTGTTGGCAAAACCTTGGATGTATGC CTATTCTTGCTTTATAAGTTTTTTGATGGCAAATGTCGCCTTAATGAAAA TAGTAGCGAAGAACAGCGAAGGACTGCCAACCGATTGTTTAAGATGTTAC TTTATTTGTTCGACGAGGTGTTATTGCCCAGCCACAACACGCATCATGTG CAATTCATCCTATTTTATGCAACTAGTCTGCGGTCGGTATATTCCGAAGC TTTTCTTGATTCCTTATGGACGAAAGTCCAAAATCCGAATGTATCCGCTG TAATTCGACATGCTGCGGTGGGATACATGGCTAGCTTTTTATCTCGCGCA CGATTTTTGCCGCTTAGCACTGTTACTTTCTACCTAAAAGAGTTGACAAG GTGGGCTCATACATACATAGATGACTCCGATGCATATAAGCAGAACTGCT CTCTGAAAGCCAATTTGGTTTTCTATTCTGTTTGCCAAGCTGTGTTTTAT TTAATTGCATTTCGCGCAAAAGATTTGACGGCCAGTTCAAAAGATTTGCT CTTCCTCCAATCCCTCCAACTATCGCGCCTTGCTATGTGTCATTTAAATC CCCTGCGGTATTGTTTAGCCCCAGTGGCCACAGCATTTGCTGGTGTTACA AGAACTTACCAGCTGGCCTATTGTCATACTGTTTTGGAGCGCAACGCTCG CCGTAAACTGGCTACAGTTTACGGTCATGAAAAATGCATGCCCGATGAGA CGCTGGAATCGTTTTTTCCCTTCGATCCTTATGTACTTAAGTTATCAAAA AAATATATTGAGACTAATTATATGGTTTACCAGAGCAATGACACGGATGA GTATGTCTATGGGTCTAACAAATACGGGCATTCTAGGAAACGTGGTGACT CTGAAATGCTAGAGGAAGACGAATTCCTAATTGTCGACAAACGTCCAAAG AATTTTGATCTGTCTAAAAGTCAGGAATTTGACAAACAATTTCATTTCGG ATCTTCGCCATGATTTTACGAATAAGTCGTATTTGTTCAAAATTACTTAT AAAAAAGAAATTATAAATGCAATAAATTTTTTACTCTGGGTTGCAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tif-IA.h | 2507 | Tif-IA.h | 62..2156 | 1..2095 | 10475 | 100 | Plus |
Tif-IA-RA | 2243 | Tif-IA-RA | 62..2156 | 1..2095 | 10475 | 100 | Plus |
Tif-IA.d | 2090 | Tif-IA.d | 1059..2085 | 1069..2095 | 5135 | 100 | Plus |
Tif-IA.d | 2090 | Tif-IA.d | 45..1058 | 1..1014 | 5070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 22251729..22252220 | 876..1367 | 2460 | 100 | Plus |
chr2L | 23010047 | chr2L | 22248904..22249386 | 394..876 | 2415 | 100 | Plus |
chr2L | 23010047 | chr2L | 22248454..22248847 | 1..394 | 1970 | 100 | Plus |
chr2L | 23010047 | chr2L | 22256492..22256792 | 1794..2094 | 1505 | 100 | Plus |
chr2L | 23010047 | chr2L | 22256183..22256434 | 1542..1793 | 1260 | 100 | Plus |
chr2L | 23010047 | chr2L | 22252277..22252456 | 1364..1543 | 900 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 22253194..22253685 | 876..1367 | 2460 | 100 | Plus |
2L | 23513712 | 2L | 22250372..22250854 | 394..876 | 2415 | 100 | Plus |
2L | 23513712 | 2L | 22249922..22250315 | 1..394 | 1970 | 100 | Plus |
2L | 23513712 | 2L | 22257960..22258261 | 1794..2095 | 1510 | 100 | Plus |
2L | 23513712 | 2L | 22257651..22257902 | 1542..1793 | 1260 | 100 | Plus |
2L | 23513712 | 2L | 22253742..22253921 | 1364..1543 | 900 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 22253194..22253685 | 876..1367 | 2460 | 100 | Plus |
2L | 23513712 | 2L | 22250372..22250854 | 394..876 | 2415 | 100 | Plus |
2L | 23513712 | 2L | 22249922..22250315 | 1..394 | 1970 | 100 | Plus |
2L | 23513712 | 2L | 22257960..22258261 | 1794..2095 | 1510 | 100 | Plus |
2L | 23513712 | 2L | 22257651..22257902 | 1542..1793 | 1260 | 100 | Plus |
2L | 23513712 | 2L | 22253742..22253921 | 1364..1543 | 900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 22248454..22248846 | 1..393 | 100 | -> | Plus |
chr2L | 22248904..22249385 | 394..875 | 100 | -> | Plus |
chr2L | 22251729..22252220 | 876..1367 | 100 | -> | Plus |
chr2L | 22252281..22252456 | 1368..1543 | 100 | -> | Plus |
chr2L | 22256185..22256434 | 1544..1793 | 100 | -> | Plus |
chr2L | 22256492..22256792 | 1794..2094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tif-IA-RA | 1..1836 | 178..2013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tif-IA-RA | 1..1836 | 178..2013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tif-IA-RA | 1..1836 | 178..2013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tif-IA-RA | 1..1836 | 178..2013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tif-IA-RA | 1..1836 | 178..2013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tif-IA-RA | 45..2138 | 1..2094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tif-IA-RA | 45..2138 | 1..2094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tif-IA-RA | 47..2140 | 1..2094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tif-IA-RA | 45..2138 | 1..2094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tif-IA-RA | 47..2140 | 1..2094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22257960..22258260 | 1794..2094 | 100 | Plus | |
2L | 22249922..22250314 | 1..393 | 100 | -> | Plus |
2L | 22250372..22250853 | 394..875 | 100 | -> | Plus |
2L | 22253194..22253685 | 876..1367 | 100 | -> | Plus |
2L | 22253746..22253921 | 1368..1543 | 100 | -> | Plus |
2L | 22257653..22257902 | 1544..1793 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22257960..22258260 | 1794..2094 | 100 | Plus | |
2L | 22249922..22250314 | 1..393 | 100 | -> | Plus |
2L | 22250372..22250853 | 394..875 | 100 | -> | Plus |
2L | 22253194..22253685 | 876..1367 | 100 | -> | Plus |
2L | 22253746..22253921 | 1368..1543 | 100 | -> | Plus |
2L | 22257653..22257902 | 1544..1793 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22257960..22258260 | 1794..2094 | 100 | Plus | |
2L | 22249922..22250314 | 1..393 | 100 | -> | Plus |
2L | 22250372..22250853 | 394..875 | 100 | -> | Plus |
2L | 22253194..22253685 | 876..1367 | 100 | -> | Plus |
2L | 22253746..22253921 | 1368..1543 | 100 | -> | Plus |
2L | 22257653..22257902 | 1544..1793 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 22249922..22250314 | 1..393 | 100 | -> | Plus |
arm_2L | 22250372..22250853 | 394..875 | 100 | -> | Plus |
arm_2L | 22253194..22253685 | 876..1367 | 100 | -> | Plus |
arm_2L | 22253746..22253921 | 1368..1543 | 100 | -> | Plus |
arm_2L | 22257653..22257902 | 1544..1793 | 100 | -> | Plus |
arm_2L | 22257960..22258260 | 1794..2094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22249922..22250314 | 1..393 | 100 | -> | Plus |
2L | 22250372..22250853 | 394..875 | 100 | -> | Plus |
2L | 22253194..22253685 | 876..1367 | 100 | -> | Plus |
2L | 22253746..22253921 | 1368..1543 | 100 | -> | Plus |
2L | 22257653..22257902 | 1544..1793 | 100 | -> | Plus |
2L | 22257960..22258260 | 1794..2094 | 100 | Plus |
Translation from 177 to 2012
> LD10456.pep MSFYTSKTDVTSILKTFSGVKRNQANAVAINKVRFSTPKEKGLAESVRVA LEERNFHLVKEFTYFLREAELSDDEVVIIIKDAKRIVHNLTPEFVTVVEA LLSLNWKKRSSEIIEAYTEFCIELMVTHNRYLPIGVSKLIVHWIPGDMDE SDWVHGCPSEHVRNELKPIHKVLDRILTAVPMAFDIIIDAISAKFPYFKK PYHVTAGYLYNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAPKDEIELEM NDEEEKVEADTLFEIDDVCAENVPKSEKSVSHPVGKTLDVCLFLLYKFFD GKCRLNENSSEEQRRTANRLFKMLLYLFDEVLLPSHNTHHVQFILFYATS LRSVYSEAFLDSLWTKVQNPNVSAVIRHAAVGYMASFLSRARFLPLSTVT FYLKELTRWAHTYIDDSDAYKQNCSLKANLVFYSVCQAVFYLIAFRAKDL TASSKDLLFLQSLQLSRLAMCHLNPLRYCLAPVATAFAGVTRTYQLAYCH TVLERNARRKLATVYGHEKCMPDETLESFFPFDPYVLKLSKKYIETNYMV YQSNDTDEYVYGSNKYGHSRKRGDSEMLEEDEFLIVDKRPKNFDLSKSQE FDKQFHFGSSP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22755-PA | 608 | GF22755-PA | 1..603 | 1..610 | 2320 | 69.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21453-PA | 615 | GG21453-PA | 1..611 | 1..611 | 2931 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13629-PA | 617 | GH13629-PA | 1..613 | 1..611 | 1988 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tif-IA-PA | 611 | CG3278-PA | 1..611 | 1..611 | 3178 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11780-PA | 617 | GI11780-PA | 1..613 | 1..611 | 2088 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21145-PA | 596 | GL21145-PA | 1..592 | 1..611 | 2157 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17133-PA | 609 | GA17133-PA | 1..605 | 1..611 | 2204 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18796-PA | 615 | GM18796-PA | 1..610 | 1..610 | 3195 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21614-PA | 210 | GD21614-PA | 1..200 | 1..200 | 968 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13145-PA | 617 | GJ13145-PA | 1..613 | 1..611 | 2125 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23990-PA | 627 | GK23990-PA | 1..623 | 1..611 | 2216 | 68.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Tif-IA-PA | 615 | GE12956-PA | 1..611 | 1..611 | 2890 | 92 | Plus |
Translation from 177 to 2012
> LD10456.hyp MSFYTSKTDVTSILKTFSGVKRNQANAVAINKVRFSTPKEKGLAESVRVA LEERNFHLVKEFTYFLREAELSDDEVVIIIKDAKRIVHNLTPEFVTVVEA LLSLNWKKRSSEIIEAYTEFCIELMVTHNRYLPIGVSKLIVHWIPGDMDE SDWVHGCPSEHVRNELKPIHKVLDRILTAVPMAFDIIIDAISAKFPYFKK PYHVTAGYLYNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAPKDEIELEM NDEEEKVEADTLFEIDDVCAENVPKSEKSVSHPVGKTLDVCLFLLYKFFD GKCRLNENSSEEQRRTANRLFKMLLYLFDEVLLPSHNTHHVQFILFYATS LRSVYSEAFLDSLWTKVQNPNVSAVIRHAAVGYMASFLSRARFLPLSTVT FYLKELTRWAHTYIDDSDAYKQNCSLKANLVFYSVCQAVFYLIAFRAKDL TASSKDLLFLQSLQLSRLAMCHLNPLRYCLAPVATAFAGVTRTYQLAYCH TVLERNARRKLATVYGHEKCMPDETLESFFPFDPYVLKLSKKYIETNYMV YQSNDTDEYVYGSNKYGHSRKRGDSEMLEEDEFLIVDKRPKNFDLSKSQE FDKQFHFGSSP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tif-IA-PA | 611 | CG3278-PA | 1..611 | 1..611 | 3178 | 100 | Plus |