Clone LD10516 Report

Search the DGRC for LD10516

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:105
Well:16
Vector:pBS SK-
Associated Gene/TranscriptCul3-RC
Protein status:LD10516.pep: gold
Preliminary Size:2725
Sequenced Size:3029

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11861 2001-01-01 Release 2 assignment
CG11861 2005-03-03 Blastp of sequenced clone
gft 2008-04-29 Release 5.5 accounting
gft 2008-08-15 Release 5.9 accounting
gft 2008-12-18 5.12 accounting

Clone Sequence Records

LD10516.complete Sequence

3029 bp (3029 high quality bases) assembled on 2005-03-03

GenBank Submission: BT021406

> LD10516.complete
TTAAAACCTACAATCAATATGAAATGCAAGTAAACGTTGAAAACAGCAAC
AAATCAAGCTAAATAATAGTAGTGACTTTACTAATGCATTCGCACCGGTA
AAATACATTTTGAAATAGTAAAAATTGTGCGAAAGCGACGTGGAAAGCCG
TTTCAAAAGGCCAGGATAAACCAAGGATAACCCAGGTTAACTGTGTTCTT
GTTGTGTTAACCATTGATTGCCGCCGAGGAAAGCAGGTTCCGTCATCGGA
AAAGTCGGAGAAGCACCTGCTCTTCTTGCAGCTCCCTGCTCCGGAGTCCG
AACCGCCAATAAAGTGGAGGAGCAGTGCCGACGCTTGCAAAGCATGAATC
TGCGGGGAAATCCTCCCAAGAAGGAGGGCAAAATGCGCATTCGGGCCTTT
CCGGCCTCCATGGACGAGAAGTACGTGGAGACCATTTGGGCCAGCTTAAA
GAATGCTATCCAGGAGATACAGAAAAAGAACAACTCCGGACTATCGTTTG
AACAACTCTACCGGAATGCGTACAACATGGTGCTGCATAAGCACGGCAAT
AGACTGTATTACGGTCTGAGGGAGGTCGTCTCAGAACACCTGGAGCACAA
GGTGCGGGCGGATGTGCTGGAGGCTCTGCACAGCAATTTCCTACCCAAGT
TAAACCAGGCCTGGACAGACCACCAGACATCTATGGTGATGATCCGCGAC
ATACTCATGTACATGGATAGAGTTTATGTGCAGCAGCGCGAGGTAGACAA
TGTGTACAATTTGGGATTAATTTTGTTCAGGGATCAGGTGGTTCGCTATT
CTGAGATTCAAAAGGCCCTGCGAGAGAAGTTGCTGGGCATGGTGATGGAG
GAACGTCATGGCGAAGCCATTAACCATCTGGCTATCAAGAATGCTTGCAG
TATGCTGATCACCCTGGGGATTAACTCGCGCACTGTCTACGAAGAGGACT
TTGAAAAGCCCTTCCTTGCGCAATCGGCGGCGTTTTACAAATTCGAGTCG
CAGAACTTTCTTGCCGAGAACAACGCTGGCGTTTACATCAAGAAAGTGGA
AGCGCGCATCACGGAGGAATCTTCCCGGGCAGCGCTGTATCTCGATAAGG
ATACGGAGCCCCGCATTGTGCGCGTGGTCGAAGAAGAGCTGATCAAAAAG
CACATGCGACCCATTGTTGAAATGGAGAACTCGGGCGTGGTGTACATGAT
CAAGAACTCAAAGACCGAGGATCTGGCCTGCACATATAAGCTTTTCTCGC
GCCTGAAGGAGGAGGGTCTCAAGGTGATAGCGGACACAATGTCGGCATAT
CTGCGAGAGCAAGGACGCATGCTGGTTAAGGAAGAAGAAAACGGCAACAC
GAATCCCATAACATTCGTGCAGAACTTGCTGGATCTCAAGGACCGCTTCG
ACCAGTTTCTGGTGCACTCGTTCGCCAACGATCGCATATTCAAAAACGTC
ATCTCATCCGATTTTGAACATTTCTTGAACCTAAATAACAAATCCCCGGA
GTATCTATCGCTATTCATCGATGACAAACTGAAAAAGGGTGGCAAGGGAA
TGAGCGAACAGGAAATTGAGTCCATCTTGGATAAGACAATGGTTCTCTTC
CGTTTCCTATTGGAGAAAGATGTCTTTGAGCGCTATTACAAGACGCATTT
AGCCAAGAGATTGCTGCTGAACAAATCAGTCTCTGATGATTTCGAGAAGA
ATATGATATCAAAACTAAAGACTGAATGCGGCTGTCAATTCACCTCGAAG
CTAGAGGGCATGTTTAAAGATATGTCAGTCTCCAATACGATCATGGATGA
GTTTAAGAACTTTGTAAATAATAACAATTTATCCCTTGGCGGTGTGGAGC
TAACGGTACGCATACTAACCACTGGTTTTTGGCCCACACAGACAGCAACT
CCGAACTGCAATATACCCGCCGCTCCGCGTGAAGCCTTTGACATTTTCAA
GAACTTCTATCTAAATAAGCACTCAGGACGTCAATTGACGTTACAGCCAC
AAATGGGAACCGCCTATATCAACGCTGTGTTTTATGGCCGCAAGGCAGTT
GAAAGTGAAAAGGATAAAGATGCACCCAGCTCCAGTTCAAGCGGCTGTGG
GGTGCCCACCACCACACGCAAGCACATATTGCAAGTGTCCACGTACCAGA
TGTGTGTGCTACTGCTGTTTAATAACCGCGACGTGCTCACCTACGATGAC
ATACACCAGGAGACCGATATACCGGAACGGGAGCTCGTCCGAGCACTACA
ATCGTTGTCCATGGGCAAACCCGCTCAGCGTTTGTTAGTACGCAATTCTA
AAACGAAAACTAAGGACATTGAGCCCACGGATGAGTTTTACGTAAACGAC
GCCTTCAACTCCAAGTTCCACAGGGTGAAGATACAAACGGTAGCCGCCAA
GGGAGAATCAGAGCCAGAGCGTAAGGAAACGCGCGGAAAGGTCGACGAGG
ATCGTAAGCACGAGATCGAAGCGGCTATTGTGCGCATAATGAAGGCCCGC
AAGCGTCTGGCTCACAACTTGCTAGTATCAGATGTGACGTCGCAGCTAAA
GTCGCGTTTCTTGCCCTCGCCCGTGTTTATCAAAAAGCGCATTGAGGGCC
TAATCGAGCGCGAGTATCTGCAACGATCGCCGGAAGATCGCAAAGTGTAC
AACTACTTGGCCTAAGCGGCCCACAAAAAGTAGCAGGAGCGTCTTAAGCA
GGATCCGGAACACACTCATCTTCAAATCGCCAGGGCTTGCACACTAACTG
AAAAACACAATCTGCAGCTCGGACGGAATGGCCTGAGCATACGAGCGGCA
TTGATATGGCGGATACTGACCACGATTATAGATGACCGCCAGCCAATAAC
CCGAATACATAAATATATCAATTAGTGCGCCCCGAATCGTAAAATTTCGT
TTCGCAACCCATTTTGTAAGCCTGACATTCAAAATTCAACAGTTAAAAAT
GCTATTGGATAAGGCACCACCATAATTATTATCCCTCTAATATATTTCTT
GATATTCTCTAAAAAAAAAAAAAAAAAAA

LD10516.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:54:02
Subject Length Description Subject Range Query Range Score Percent Strand
cul-3.b 3581 cul-3.b 189..3200 1..3012 15060 100 Plus
cul-3.f 4333 cul-3.f 690..3537 165..3012 14240 100 Plus
cul-3.g 3863 cul-3.g 690..3537 165..3012 14240 100 Plus
cul-3.f 4333 cul-3.f 15..179 1..165 825 100 Plus
cul-3.g 3863 cul-3.g 15..179 1..165 825 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 15266726..15267495 1554..785 3835 99.9 Minus
chr2L 23010047 chr2L 15264764..15265261 3010..2513 2490 100 Minus
chr2L 23010047 chr2L 15267554..15267940 789..403 1935 100 Minus
chr2L 23010047 chr2L 15269639..15269881 404..162 1215 100 Minus
chr2L 23010047 chr2L 15265530..15265756 2374..2148 1135 100 Minus
chr2L 23010047 chr2L 15266265..15266437 1891..1719 865 100 Minus
chr2L 23010047 chr2L 15266498..15266668 1720..1550 855 100 Minus
chr2L 23010047 chr2L 15270568..15270732 165..1 825 100 Minus
chr2L 23010047 chr2L 15265880..15266027 2149..2002 725 99.3 Minus
chr2L 23010047 chr2L 15265331..15265471 2512..2372 705 100 Minus
chr2L 23010047 chr2L 15266087..15266206 2007..1888 600 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:57:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:09:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15267991..15268760 1554..785 3835 99.9 Minus
2L 23513712 2L 15266027..15266526 3012..2513 2500 100 Minus
2L 23513712 2L 15268819..15269205 789..403 1935 100 Minus
2L 23513712 2L 15270904..15271146 404..162 1215 100 Minus
2L 23513712 2L 15266795..15267021 2374..2148 1135 100 Minus
2L 23513712 2L 15267530..15267702 1891..1719 865 100 Minus
2L 23513712 2L 15267763..15267933 1720..1550 855 100 Minus
2L 23513712 2L 15271833..15271997 165..1 825 100 Minus
2L 23513712 2L 15267145..15267292 2149..2002 725 99.3 Minus
2L 23513712 2L 15266596..15266736 2512..2372 705 100 Minus
2L 23513712 2L 15267352..15267471 2007..1888 600 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:43:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15267991..15268760 1554..785 3835 99.8 Minus
2L 23513712 2L 15266027..15266526 3012..2513 2500 100 Minus
2L 23513712 2L 15268819..15269205 789..403 1935 100 Minus
2L 23513712 2L 15270904..15271146 404..162 1215 100 Minus
2L 23513712 2L 15266795..15267021 2374..2148 1135 100 Minus
2L 23513712 2L 15267530..15267702 1891..1719 865 100 Minus
2L 23513712 2L 15267763..15267933 1720..1550 855 100 Minus
2L 23513712 2L 15271833..15271997 165..1 825 100 Minus
2L 23513712 2L 15267145..15267292 2149..2002 725 99.3 Minus
2L 23513712 2L 15266596..15266736 2512..2372 705 100 Minus
2L 23513712 2L 15267352..15267471 2007..1888 600 100 Minus
Blast to na_te.dros performed on 2019-03-16 19:09:08 has no hits.

LD10516.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:09:49 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 15269640..15269878 165..403 100 <- Minus
chr2L 15270569..15270732 1..164 100   Minus
chr2L 15264764..15265261 2513..3010 100 <- Minus
chr2L 15265331..15265469 2374..2512 100 <- Minus
chr2L 15265531..15265754 2150..2373 100 <- Minus
chr2L 15265880..15266022 2007..2149 100 <- Minus
chr2L 15266088..15266202 1892..2006 100 <- Minus
chr2L 15266265..15266435 1721..1891 100 <- Minus
chr2L 15266498..15266668 1550..1720 100 <- Minus
chr2L 15266731..15267492 788..1549 100 <- Minus
chr2L 15267556..15267939 404..787 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:44:00 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
gft-RB 1..2322 344..2665 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:26:30 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
Cul-3-RE 1..2322 344..2665 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:23:45 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
Cul-3-RD 1..2322 344..2665 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:10:33 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
gft-RB 1..2322 344..2665 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:01:48 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
Cul3-RD 1..2322 344..2665 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:29:23 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
gft-RA 1..3010 1..3010 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:26:30 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
Cul-3-RC 1..3010 1..3010 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:23:45 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
Cul-3-RC 28..3037 1..3010 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:10:33 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
gft-RA 1..3010 1..3010 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:01:48 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
Cul3-RC 28..3037 1..3010 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:09:49 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15267145..15267287 2007..2149 100 <- Minus
2L 15267353..15267467 1892..2006 100 <- Minus
2L 15268821..15269204 404..787 100 <- Minus
2L 15270905..15271143 165..403 100 <- Minus
2L 15271834..15271997 1..164 100   Minus
2L 15266029..15266526 2513..3010 100 <- Minus
2L 15266596..15266734 2374..2512 100 <- Minus
2L 15266796..15267019 2150..2373 100 <- Minus
2L 15267530..15267700 1721..1891 100 <- Minus
2L 15267763..15267933 1550..1720 100 <- Minus
2L 15267996..15268757 788..1549 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:09:49 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15267145..15267287 2007..2149 100 <- Minus
2L 15267353..15267467 1892..2006 100 <- Minus
2L 15268821..15269204 404..787 100 <- Minus
2L 15270905..15271143 165..403 100 <- Minus
2L 15271834..15271997 1..164 100   Minus
2L 15266029..15266526 2513..3010 100 <- Minus
2L 15266596..15266734 2374..2512 100 <- Minus
2L 15266796..15267019 2150..2373 100 <- Minus
2L 15267530..15267700 1721..1891 100 <- Minus
2L 15267763..15267933 1550..1720 100 <- Minus
2L 15267996..15268757 788..1549 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:09:49 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15267145..15267287 2007..2149 100 <- Minus
2L 15267353..15267467 1892..2006 100 <- Minus
2L 15268821..15269204 404..787 100 <- Minus
2L 15270905..15271143 165..403 100 <- Minus
2L 15271834..15271997 1..164 100   Minus
2L 15266029..15266526 2513..3010 100 <- Minus
2L 15266596..15266734 2374..2512 100 <- Minus
2L 15266796..15267019 2150..2373 100 <- Minus
2L 15267530..15267700 1721..1891 100 <- Minus
2L 15267763..15267933 1550..1720 100 <- Minus
2L 15267996..15268757 788..1549 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:23:45 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15267145..15267287 2007..2149 100 <- Minus
arm_2L 15267353..15267467 1892..2006 100 <- Minus
arm_2L 15267530..15267700 1721..1891 100 <- Minus
arm_2L 15267763..15267933 1550..1720 100 <- Minus
arm_2L 15266029..15266526 2513..3010 100 <- Minus
arm_2L 15266596..15266734 2374..2512 100 <- Minus
arm_2L 15266796..15267019 2150..2373 100 <- Minus
arm_2L 15267996..15268757 788..1549 100 <- Minus
arm_2L 15268821..15269204 404..787 100 <- Minus
arm_2L 15270905..15271143 165..403 100 <- Minus
arm_2L 15271834..15271997 1..164 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:47:04 Download gff for LD10516.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15266029..15266526 2513..3010 100 <- Minus
2L 15266596..15266734 2374..2512 100 <- Minus
2L 15266796..15267019 2150..2373 100 <- Minus
2L 15267145..15267287 2007..2149 100 <- Minus
2L 15267353..15267467 1892..2006 100 <- Minus
2L 15267530..15267700 1721..1891 100 <- Minus
2L 15267763..15267933 1550..1720 100 <- Minus
2L 15267996..15268757 788..1549 100 <- Minus
2L 15268821..15269204 404..787 100 <- Minus
2L 15270905..15271143 165..403 100 <- Minus
2L 15271834..15271997 1..164 100   Minus

LD10516.pep Sequence

Translation from 343 to 2664

> LD10516.pep
MNLRGNPPKKEGKMRIRAFPASMDEKYVETIWASLKNAIQEIQKKNNSGL
SFEQLYRNAYNMVLHKHGNRLYYGLREVVSEHLEHKVRADVLEALHSNFL
PKLNQAWTDHQTSMVMIRDILMYMDRVYVQQREVDNVYNLGLILFRDQVV
RYSEIQKALREKLLGMVMEERHGEAINHLAIKNACSMLITLGINSRTVYE
EDFEKPFLAQSAAFYKFESQNFLAENNAGVYIKKVEARITEESSRAALYL
DKDTEPRIVRVVEEELIKKHMRPIVEMENSGVVYMIKNSKTEDLACTYKL
FSRLKEEGLKVIADTMSAYLREQGRMLVKEEENGNTNPITFVQNLLDLKD
RFDQFLVHSFANDRIFKNVISSDFEHFLNLNNKSPEYLSLFIDDKLKKGG
KGMSEQEIESILDKTMVLFRFLLEKDVFERYYKTHLAKRLLLNKSVSDDF
EKNMISKLKTECGCQFTSKLEGMFKDMSVSNTIMDEFKNFVNNNNLSLGG
VELTVRILTTGFWPTQTATPNCNIPAAPREAFDIFKNFYLNKHSGRQLTL
QPQMGTAYINAVFYGRKAVESEKDKDAPSSSSSGCGVPTTTRKHILQVST
YQMCVLLLFNNRDVLTYDDIHQETDIPERELVRALQSLSMGKPAQRLLVR
NSKTKTKDIEPTDEFYVNDAFNSKFHRVKIQTVAAKGESEPERKETRGKV
DEDRKHEIEAAIVRIMKARKRLAHNLLVSDVTSQLKSRFLPSPVFIKKRI
EGLIEREYLQRSPEDRKVYNYLA*

LD10516.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14531-PA 874 GF14531-PA 118..874 17..773 4004 98.3 Plus
Dana\GF11213-PA 821 GF11213-PA 91..821 3..773 1190 36.8 Plus
Dana\GF13641-PA 775 GF13641-PA 13..775 20..773 791 29.2 Plus
Dana\GF15487-PA 748 GF15487-PA 54..748 68..773 601 25.4 Plus
Dana\GF18726-PA 840 GF18726-PA 214..840 152..773 485 25.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24216-PA 1027 GG24216-PA 271..1027 17..773 4035 99.2 Plus
Dere\GG10678-PA 821 GG10678-PA 91..821 3..773 1159 36.4 Plus
Dere\GG23311-PA 858 GG23311-PA 159..858 68..773 772 29.8 Plus
Dere\GG21342-PA 753 GG21342-PA 54..753 68..773 595 25.5 Plus
Dere\GG12041-PA 852 GG12041-PA 226..852 152..773 482 25.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13125-PA 990 GH13125-PA 232..990 17..773 3725 91.4 Plus
Dgri\GH19988-PA 826 GH19988-PA 101..826 8..773 1184 37.1 Plus
Dgri\GH21298-PA 773 GH21298-PA 106..773 99..773 763 30.5 Plus
Dgri\GH10784-PA 756 GH10784-PA 59..756 69..773 594 26 Plus
Dgri\GH18911-PA 858 GH18911-PA 232..858 152..773 507 26 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:59
Subject Length Description Subject Range Query Range Score Percent Strand
Cul3-PE 773 CG11861-PB 1..773 1..773 3959 100 Plus
Cul3-PC 773 CG11861-PA 1..773 1..773 3959 100 Plus
Cul3-PD 773 CG11861-PC 1..773 1..773 3959 100 Plus
Cul3-PF 934 CG42615-PF 178..934 17..773 3864 99.9 Plus
Cul4-PB 821 CG8711-PB 112..821 22..773 1159 37 Plus
Cul4-PA 821 CG8711-PA 112..821 22..773 1159 37 Plus
Cul1-PD 774 CG1877-PD 75..774 68..773 812 29.9 Plus
Cul1-PA 774 CG1877-PA 75..774 68..773 812 29.9 Plus
Cul1-PB 774 CG1877-PB 75..774 68..773 812 29.9 Plus
Cul1-PC 774 CG1877-PC 75..774 68..773 812 29.9 Plus
Cul2-PB 753 CG1512-PB 55..753 69..773 635 25.1 Plus
Cul2-PA 753 CG1512-PA 55..753 69..773 635 25.1 Plus
Cul5-PA 852 CG1401-PA 226..852 152..773 510 24.4 Plus
CG11261-PA 670 CG11261-PA 345..670 404..772 238 27.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22726-PA 1023 GI22726-PA 267..1023 17..773 3792 93.4 Plus
Dmoj\GI20275-PA 822 GI20275-PA 97..822 8..773 1180 36.9 Plus
Dmoj\GI19786-PA 827 GI19786-PA 129..827 68..773 759 30.3 Plus
Dmoj\GI17442-PA 757 GI17442-PA 54..757 68..773 626 26.7 Plus
Dmoj\GI23410-PA 834 GI23410-PA 208..834 152..773 506 26.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:18:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26600-PA 1008 GL26600-PA 252..1008 17..773 3907 96.3 Plus
Dper\GL17383-PA 816 GL17383-PA 86..816 3..773 1169 36.2 Plus
Dper\GL11695-PA 774 GL11695-PA 12..774 20..773 776 29.6 Plus
Dper\GL25796-PA 756 GL25796-PA 54..756 68..773 573 24.6 Plus
Dper\GL23281-PA 846 GL23281-PA 220..846 152..773 483 25 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:18:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16511-PA 1008 GA16511-PA 252..1008 17..773 3912 96.4 Plus
Dpse\GA21273-PA 816 GA21273-PA 86..816 3..773 1169 36.2 Plus
Dpse\GA15074-PB 774 GA15074-PB 12..774 20..773 777 29.6 Plus
Dpse\GA13508-PA 756 GA13508-PA 54..756 68..773 573 24.6 Plus
Dpse\GA12695-PA 848 GA12695-PA 222..848 152..773 484 25 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:18:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14478-PA 1028 GM14478-PA 272..1028 17..773 4057 99.7 Plus
Dsec\GM20725-PA 698 GM20725-PA 89..642 3..563 863 35.7 Plus
Dsec\GM20989-PA 774 GM20989-PA 75..774 68..773 777 30 Plus
Dsec\GM16141-PA 753 GM16141-PA 54..753 68..773 604 25.6 Plus
Dsec\GM12268-PA 766 GM12268-PA 226..752 152..675 382 24.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:18:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21965-PA 1003 GD21965-PA 272..1003 17..773 3853 96 Plus
Dsim\GD10516-PA 774 GD10516-PA 75..774 68..773 777 30 Plus
Dsim\GD24329-PA 753 GD24329-PA 54..753 68..773 604 25.4 Plus
Dsim\GD12683-PA 660 GD12683-PA 343..660 404..772 229 28.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23288-PA 985 GJ23288-PA 229..985 17..773 3815 93.4 Plus
Dvir\GJ20228-PA 821 GJ20228-PA 96..821 8..773 1181 37 Plus
Dvir\GJ17750-PA 773 GJ17750-PA 75..773 68..773 754 29.8 Plus
Dvir\GJ14230-PA 756 GJ14230-PA 54..756 68..773 603 26.2 Plus
Dvir\GJ10616-PA 836 GJ10616-PA 210..836 152..773 499 26 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18258-PA 775 GK18258-PA 1..775 1..773 4029 97 Plus
Dwil\GK23161-PA 821 GK23161-PA 91..821 3..773 1178 36.9 Plus
Dwil\GK21971-PA 775 GK21971-PA 106..775 99..773 753 30 Plus
Dwil\GK22602-PA 840 GK22602-PA 214..840 152..773 496 25.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:18:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19410-PA 1027 GE19410-PA 271..1027 17..773 4037 99.2 Plus
Dyak\GE23323-PA 821 GE23323-PA 91..821 3..773 1156 36.1 Plus
Dyak\GE19156-PA 774 GE19156-PA 75..774 68..773 766 29.6 Plus
Dyak\GE12924-PA 753 GE12924-PA 54..753 68..773 597 25.9 Plus
Dyak\GE10480-PA 852 GE10480-PA 226..852 152..773 487 25.1 Plus

LD10516.hyp Sequence

Translation from 343 to 2664

> LD10516.hyp
MNLRGNPPKKEGKMRIRAFPASMDEKYVETIWASLKNAIQEIQKKNNSGL
SFEQLYRNAYNMVLHKHGNRLYYGLREVVSEHLEHKVRADVLEALHSNFL
PKLNQAWTDHQTSMVMIRDILMYMDRVYVQQREVDNVYNLGLILFRDQVV
RYSEIQKALREKLLGMVMEERHGEAINHLAIKNACSMLITLGINSRTVYE
EDFEKPFLAQSAAFYKFESQNFLAENNAGVYIKKVEARITEESSRAALYL
DKDTEPRIVRVVEEELIKKHMRPIVEMENSGVVYMIKNSKTEDLACTYKL
FSRLKEEGLKVIADTMSAYLREQGRMLVKEEENGNTNPITFVQNLLDLKD
RFDQFLVHSFANDRIFKNVISSDFEHFLNLNNKSPEYLSLFIDDKLKKGG
KGMSEQEIESILDKTMVLFRFLLEKDVFERYYKTHLAKRLLLNKSVSDDF
EKNMISKLKTECGCQFTSKLEGMFKDMSVSNTIMDEFKNFVNNNNLSLGG
VELTVRILTTGFWPTQTATPNCNIPAAPREAFDIFKNFYLNKHSGRQLTL
QPQMGTAYINAVFYGRKAVESEKDKDAPSSSSSGCGVPTTTRKHILQVST
YQMCVLLLFNNRDVLTYDDIHQETDIPERELVRALQSLSMGKPAQRLLVR
NSKTKTKDIEPTDEFYVNDAFNSKFHRVKIQTVAAKGESEPERKETRGKV
DEDRKHEIEAAIVRIMKARKRLAHNLLVSDVTSQLKSRFLPSPVFIKKRI
EGLIEREYLQRSPEDRKVYNYLA*

LD10516.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:12:35
Subject Length Description Subject Range Query Range Score Percent Strand
Cul3-PE 773 CG11861-PB 1..773 1..773 3959 100 Plus
Cul3-PC 773 CG11861-PA 1..773 1..773 3959 100 Plus
Cul3-PD 773 CG11861-PC 1..773 1..773 3959 100 Plus
Cul3-PF 934 CG42615-PF 178..934 17..773 3864 99.9 Plus
Cul4-PB 821 CG8711-PB 112..821 22..773 1159 37 Plus